Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2BBV:N6:N5
Extra
PDB:
ATOM 1 O3' U A 5 -6.377 -3.760 109.658 1.00 43.86 O
ATOM 2 P A A 6 -7.526 -2.646 109.719 1.00 52.92 P
ATOM 3 OP1 A A 6 -8.541 -3.025 110.728 1.00 47.06 O
ATOM 4 OP2 A A 6 -8.061 -2.385 108.368 1.00 46.05 O
ATOM 5 O5' A A 6 -6.762 -1.333 110.230 1.00 50.70 O
ATOM 6 C5' A A 6 -7.567 -0.269 110.804 1.00 49.60 C
ATOM 7 C4' A A 6 -6.799 1.044 110.731 1.00 47.10 C
ATOM 8 O4' A A 6 -5.559 0.722 110.058 1.00 46.71 O
ATOM 9 C3' A A 6 -7.410 2.143 109.856 1.00 49.31 C
ATOM 10 O3' A A 6 -8.420 2.903 110.474 1.00 49.26 O
ATOM 11 C2' A A 6 -6.225 2.971 109.481 1.00 47.68 C
ATOM 12 O2' A A 6 -5.909 3.902 110.512 1.00 48.07 O
ATOM 13 C1' A A 6 -5.234 1.848 109.277 1.00 44.21 C
ATOM 14 N9 A A 6 -5.288 1.521 107.887 1.00 36.08 N
ATOM 15 C8 A A 6 -5.764 0.397 107.265 1.00 35.43 C
ATOM 16 N7 A A 6 -5.707 0.490 105.966 1.00 31.69 N
ATOM 17 C5 A A 6 -5.156 1.749 105.776 1.00 29.73 C
ATOM 18 C6 A A 6 -4.834 2.524 104.645 1.00 27.42 C
ATOM 19 N6 A A 6 -5.084 2.132 103.382 1.00 23.30 N
ATOM 20 N1 A A 6 -4.256 3.721 104.843 1.00 29.11 N
ATOM 21 C2 A A 6 -4.013 4.130 106.091 1.00 27.80 C
ATOM 22 N3 A A 6 -4.278 3.524 107.214 1.00 30.06 N
ATOM 23 C4 A A 6 -4.866 2.359 106.971 1.00 33.43 C
ATOM 24 P U A 7 -9.630 3.374 109.555 1.00 50.50 P
ATOM 25 OP1 U A 7 -10.561 4.213 110.335 1.00 46.62 O
ATOM 26 OP2 U A 7 -10.250 2.194 108.908 1.00 45.50 O
ATOM 27 O5' U A 7 -8.898 4.263 108.423 1.00 42.94 O
TER
ATOM 1 O3' A B 4 -3.630 -7.864 106.487 1.00 48.39 O
ATOM 2 P U B 5 -4.918 -7.036 106.037 1.00 54.16 P
ATOM 3 OP1 U B 5 -6.143 -7.837 106.277 1.00 49.61 O
ATOM 4 OP2 U B 5 -4.758 -6.576 104.640 1.00 50.05 O
ATOM 5 O5' U B 5 -4.870 -5.776 107.029 1.00 47.95 O
ATOM 6 C5' U B 5 -4.403 -6.010 108.369 1.00 40.54 C
ATOM 7 C4' U B 5 -4.199 -4.695 109.140 1.00 38.71 C
ATOM 8 O4' U B 5 -2.902 -4.131 108.772 1.00 38.16 O
ATOM 9 C3' U B 5 -5.200 -3.576 108.869 1.00 41.68 C
ATOM 10 O3' U B 5 -6.377 -3.760 109.658 1.00 43.86 O
ATOM 11 C2' U B 5 -4.392 -2.337 109.241 1.00 38.50 C
ATOM 12 O2' U B 5 -4.493 -2.062 110.627 1.00 36.42 O
ATOM 13 C1' U B 5 -2.974 -2.703 108.781 1.00 36.31 C
ATOM 14 N1 U B 5 -2.604 -2.185 107.436 1.00 33.70 N
ATOM 15 C2 U B 5 -1.607 -1.245 107.400 1.00 36.74 C
ATOM 16 O2 U B 5 -1.034 -0.856 108.404 1.00 35.18 O
ATOM 17 N3 U B 5 -1.273 -0.752 106.154 1.00 37.24 N
ATOM 18 C4 U B 5 -1.848 -1.127 104.946 1.00 39.85 C
ATOM 19 O4 U B 5 -1.465 -0.608 103.896 1.00 40.52 O
ATOM 20 C5 U B 5 -2.879 -2.130 105.074 1.00 38.62 C
ATOM 21 C6 U B 5 -3.227 -2.624 106.280 1.00 36.57 C
ATOM 22 P A B 6 -7.526 -2.646 109.719 1.00 52.92 P
ATOM 23 OP1 A B 6 -8.541 -3.025 110.728 1.00 47.06 O
ATOM 24 OP2 A B 6 -8.061 -2.385 108.368 1.00 46.05 O
ATOM 25 O5' A B 6 -6.762 -1.333 110.230 1.00 50.70 O
TER
ATOM 2 P A A 6 -7.526 -2.646 109.719 1.00 52.92 P
ATOM 3 OP1 A A 6 -8.541 -3.025 110.728 1.00 47.06 O
ATOM 4 OP2 A A 6 -8.061 -2.385 108.368 1.00 46.05 O
ATOM 5 O5' A A 6 -6.762 -1.333 110.230 1.00 50.70 O
ATOM 6 C5' A A 6 -7.567 -0.269 110.804 1.00 49.60 C
ATOM 7 C4' A A 6 -6.799 1.044 110.731 1.00 47.10 C
ATOM 8 O4' A A 6 -5.559 0.722 110.058 1.00 46.71 O
ATOM 9 C3' A A 6 -7.410 2.143 109.856 1.00 49.31 C
ATOM 10 O3' A A 6 -8.420 2.903 110.474 1.00 49.26 O
ATOM 11 C2' A A 6 -6.225 2.971 109.481 1.00 47.68 C
ATOM 12 O2' A A 6 -5.909 3.902 110.512 1.00 48.07 O
ATOM 13 C1' A A 6 -5.234 1.848 109.277 1.00 44.21 C
ATOM 14 N9 A A 6 -5.288 1.521 107.887 1.00 36.08 N
ATOM 15 C8 A A 6 -5.764 0.397 107.265 1.00 35.43 C
ATOM 16 N7 A A 6 -5.707 0.490 105.966 1.00 31.69 N
ATOM 17 C5 A A 6 -5.156 1.749 105.776 1.00 29.73 C
ATOM 18 C6 A A 6 -4.834 2.524 104.645 1.00 27.42 C
ATOM 19 N6 A A 6 -5.084 2.132 103.382 1.00 23.30 N
ATOM 20 N1 A A 6 -4.256 3.721 104.843 1.00 29.11 N
ATOM 21 C2 A A 6 -4.013 4.130 106.091 1.00 27.80 C
ATOM 22 N3 A A 6 -4.278 3.524 107.214 1.00 30.06 N
ATOM 23 C4 A A 6 -4.866 2.359 106.971 1.00 33.43 C
ATOM 24 P U A 7 -9.630 3.374 109.555 1.00 50.50 P
ATOM 25 OP1 U A 7 -10.561 4.213 110.335 1.00 46.62 O
ATOM 26 OP2 U A 7 -10.250 2.194 108.908 1.00 45.50 O
ATOM 27 O5' U A 7 -8.898 4.263 108.423 1.00 42.94 O
TER
ATOM 1 O3' A B 4 -3.630 -7.864 106.487 1.00 48.39 O
ATOM 2 P U B 5 -4.918 -7.036 106.037 1.00 54.16 P
ATOM 3 OP1 U B 5 -6.143 -7.837 106.277 1.00 49.61 O
ATOM 4 OP2 U B 5 -4.758 -6.576 104.640 1.00 50.05 O
ATOM 5 O5' U B 5 -4.870 -5.776 107.029 1.00 47.95 O
ATOM 6 C5' U B 5 -4.403 -6.010 108.369 1.00 40.54 C
ATOM 7 C4' U B 5 -4.199 -4.695 109.140 1.00 38.71 C
ATOM 8 O4' U B 5 -2.902 -4.131 108.772 1.00 38.16 O
ATOM 9 C3' U B 5 -5.200 -3.576 108.869 1.00 41.68 C
ATOM 10 O3' U B 5 -6.377 -3.760 109.658 1.00 43.86 O
ATOM 11 C2' U B 5 -4.392 -2.337 109.241 1.00 38.50 C
ATOM 12 O2' U B 5 -4.493 -2.062 110.627 1.00 36.42 O
ATOM 13 C1' U B 5 -2.974 -2.703 108.781 1.00 36.31 C
ATOM 14 N1 U B 5 -2.604 -2.185 107.436 1.00 33.70 N
ATOM 15 C2 U B 5 -1.607 -1.245 107.400 1.00 36.74 C
ATOM 16 O2 U B 5 -1.034 -0.856 108.404 1.00 35.18 O
ATOM 17 N3 U B 5 -1.273 -0.752 106.154 1.00 37.24 N
ATOM 18 C4 U B 5 -1.848 -1.127 104.946 1.00 39.85 C
ATOM 19 O4 U B 5 -1.465 -0.608 103.896 1.00 40.52 O
ATOM 20 C5 U B 5 -2.879 -2.130 105.074 1.00 38.62 C
ATOM 21 C6 U B 5 -3.227 -2.624 106.280 1.00 36.57 C
ATOM 22 P A B 6 -7.526 -2.646 109.719 1.00 52.92 P
ATOM 23 OP1 A B 6 -8.541 -3.025 110.728 1.00 47.06 O
ATOM 24 OP2 A B 6 -8.061 -2.385 108.368 1.00 46.05 O
ATOM 25 O5' A B 6 -6.762 -1.333 110.230 1.00 50.70 O
TER
Atoms:
OP1: (-8.541,-3.025,110.728)
OP2: (-8.061,-2.385,108.368)
C3': (-7.410,2.143,109.856)
C1': (-5.234,1.848,109.277)
C5': (-7.567,-0.269,110.804)
O4': (-5.559,0.722,110.058)
C8: (-5.764,0.397,107.265)
O2': (-5.909,3.902,110.512)
C6: (-4.834,2.524,104.645)
C5: (-5.156,1.749,105.776)
C4: (-4.866,2.359,106.971)
P: (-7.526,-2.646,109.719)
C4': (-6.799,1.044,110.731)
C2': (-6.225,2.971,109.481)
C2: (-4.013,4.130,106.091)
N1: (-4.256,3.721,104.843)
N3: (-4.278,3.524,107.214)
N6: (-5.084,2.132,103.382)
N7: (-5.707,0.490,105.966)
N9: (-5.288,1.521,107.887)
O5': (-6.762,-1.333,110.230)
O3': (-8.420,2.903,110.474)
OP2: (-8.061,-2.385,108.368)
C3': (-7.410,2.143,109.856)
C1': (-5.234,1.848,109.277)
C5': (-7.567,-0.269,110.804)
O4': (-5.559,0.722,110.058)
C8: (-5.764,0.397,107.265)
O2': (-5.909,3.902,110.512)
C6: (-4.834,2.524,104.645)
C5: (-5.156,1.749,105.776)
C4: (-4.866,2.359,106.971)
P: (-7.526,-2.646,109.719)
C4': (-6.799,1.044,110.731)
C2': (-6.225,2.971,109.481)
C2: (-4.013,4.130,106.091)
N1: (-4.256,3.721,104.843)
N3: (-4.278,3.524,107.214)
N6: (-5.084,2.132,103.382)
N7: (-5.707,0.490,105.966)
N9: (-5.288,1.521,107.887)
O5': (-6.762,-1.333,110.230)
O3': (-8.420,2.903,110.474)
C4: (-1.848,-1.127,104.946)
N3: (-1.273,-0.752,106.154)
OP1: (-6.143,-7.837,106.277)
OP2: (-4.758,-6.576,104.640)
C2: (-1.607,-1.245,107.400)
C1': (-2.974,-2.703,108.781)
C3': (-5.200,-3.576,108.869)
O5': (-4.870,-5.776,107.029)
O4': (-2.902,-4.131,108.772)
C5': (-4.403,-6.010,108.369)
P: (-4.918,-7.036,106.037)
C4': (-4.199,-4.695,109.140)
C2': (-4.392,-2.337,109.241)
O2': (-4.493,-2.062,110.627)
N1: (-2.604,-2.185,107.436)
O4: (-1.465,-0.608,103.896)
O2: (-1.034,-0.856,108.404)
C6: (-3.227,-2.624,106.280)
C5: (-2.879,-2.130,105.074)
O3': (-6.377,-3.760,109.658)
N3: (-1.273,-0.752,106.154)
OP1: (-6.143,-7.837,106.277)
OP2: (-4.758,-6.576,104.640)
C2: (-1.607,-1.245,107.400)
C1': (-2.974,-2.703,108.781)
C3': (-5.200,-3.576,108.869)
O5': (-4.870,-5.776,107.029)
O4': (-2.902,-4.131,108.772)
C5': (-4.403,-6.010,108.369)
P: (-4.918,-7.036,106.037)
C4': (-4.199,-4.695,109.140)
C2': (-4.392,-2.337,109.241)
O2': (-4.493,-2.062,110.627)
N1: (-2.604,-2.185,107.436)
O4: (-1.465,-0.608,103.896)
O2: (-1.034,-0.856,108.404)
C6: (-3.227,-2.624,106.280)
C5: (-2.879,-2.130,105.074)
O3': (-6.377,-3.760,109.658)
Image (generated by PyMOL):