Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:02373:02372
Extra
PDB:
ATOM 1 O3' U A2372 62.227 99.677 102.766 1.00 38.89 O
ATOM 2 P A A2373 62.540 99.901 101.215 1.00 40.76 P
ATOM 3 OP1 A A2373 62.098 98.673 100.517 1.00 43.28 O
ATOM 4 OP2 A A2373 63.931 100.377 101.051 1.00 40.50 O
ATOM 5 O5' A A2373 61.562 101.073 100.779 1.00 39.65 O
ATOM 6 C5' A A2373 60.175 101.042 101.132 1.00 39.66 C
ATOM 7 C4' A A2373 59.592 102.426 101.010 1.00 40.18 C
ATOM 8 O4' A A2373 60.457 103.348 101.727 1.00 40.37 O
ATOM 9 C3' A A2373 59.504 102.971 99.594 1.00 37.70 C
ATOM 10 O3' A A2373 58.433 103.922 99.557 1.00 36.27 O
ATOM 11 C2' A A2373 60.866 103.631 99.425 1.00 38.16 C
ATOM 12 O2' A A2373 60.886 104.610 98.411 1.00 37.87 O
ATOM 13 C1' A A2373 61.070 104.235 100.817 1.00 39.84 C
ATOM 14 N9 A A2373 62.461 104.402 101.238 1.00 40.63 N
ATOM 15 C8 A A2373 63.514 103.543 101.046 1.00 41.02 C
ATOM 16 N7 A A2373 64.647 103.979 101.537 1.00 42.09 N
ATOM 17 C5 A A2373 64.320 105.208 102.092 1.00 41.91 C
ATOM 18 C6 A A2373 65.089 106.180 102.760 1.00 41.38 C
ATOM 19 N6 A A2373 66.398 106.062 102.989 1.00 42.46 N
ATOM 20 N1 A A2373 64.460 107.293 103.186 1.00 40.95 N
ATOM 21 C2 A A2373 63.150 107.414 102.953 1.00 41.95 C
ATOM 22 N3 A A2373 62.320 106.574 102.335 1.00 42.70 N
ATOM 23 C4 A A2373 62.976 105.478 101.922 1.00 41.77 C
ATOM 24 P C A2374 57.405 103.920 98.327 1.00 36.13 P
ATOM 25 OP1 C A2374 57.714 102.702 97.530 1.00 38.79 O
ATOM 26 OP2 C A2374 57.412 105.254 97.680 1.00 33.24 O
ATOM 27 O5' C A2374 55.954 103.700 98.945 1.00 34.71 O
TER
ATOM 1 O3' C B2371 67.397 99.652 106.060 1.00 39.75 O
ATOM 2 P U B2372 67.110 100.060 104.533 1.00 41.33 P
ATOM 3 OP1 U B2372 67.389 98.861 103.702 1.00 40.92 O
ATOM 4 OP2 U B2372 67.804 101.342 104.236 1.00 38.98 O
ATOM 5 O5' U B2372 65.541 100.320 104.494 1.00 40.92 O
ATOM 6 C5' U B2372 64.608 99.276 104.827 1.00 40.68 C
ATOM 7 C4' U B2372 63.215 99.842 104.943 1.00 40.13 C
ATOM 8 O4' U B2372 63.198 100.867 105.963 1.00 40.80 O
ATOM 9 C3' U B2372 62.721 100.590 103.722 1.00 38.75 C
ATOM 10 O3' U B2372 62.227 99.677 102.766 1.00 38.89 O
ATOM 11 C2' U B2372 61.597 101.445 104.293 1.00 40.07 C
ATOM 12 O2' U B2372 60.383 100.732 104.425 1.00 39.53 O
ATOM 13 C1' U B2372 62.140 101.771 105.689 1.00 40.71 C
ATOM 14 N1 U B2372 62.608 103.154 105.883 1.00 39.14 N
ATOM 15 C2 U B2372 61.653 104.111 106.153 1.00 38.11 C
ATOM 16 O2 U B2372 60.467 103.858 106.216 1.00 37.32 O
ATOM 17 N3 U B2372 62.138 105.378 106.342 1.00 38.88 N
ATOM 18 C4 U B2372 63.453 105.782 106.285 1.00 39.82 C
ATOM 19 O4 U B2372 63.735 106.967 106.488 1.00 37.84 O
ATOM 20 C5 U B2372 64.381 104.734 105.994 1.00 39.91 C
ATOM 21 C6 U B2372 63.938 103.489 105.807 1.00 39.51 C
ATOM 22 P A B2373 62.540 99.901 101.215 1.00 40.76 P
ATOM 23 OP1 A B2373 62.098 98.673 100.517 1.00 43.28 O
ATOM 24 OP2 A B2373 63.931 100.377 101.051 1.00 40.50 O
ATOM 25 O5' A B2373 61.562 101.073 100.779 1.00 39.65 O
TER
ATOM 2 P A A2373 62.540 99.901 101.215 1.00 40.76 P
ATOM 3 OP1 A A2373 62.098 98.673 100.517 1.00 43.28 O
ATOM 4 OP2 A A2373 63.931 100.377 101.051 1.00 40.50 O
ATOM 5 O5' A A2373 61.562 101.073 100.779 1.00 39.65 O
ATOM 6 C5' A A2373 60.175 101.042 101.132 1.00 39.66 C
ATOM 7 C4' A A2373 59.592 102.426 101.010 1.00 40.18 C
ATOM 8 O4' A A2373 60.457 103.348 101.727 1.00 40.37 O
ATOM 9 C3' A A2373 59.504 102.971 99.594 1.00 37.70 C
ATOM 10 O3' A A2373 58.433 103.922 99.557 1.00 36.27 O
ATOM 11 C2' A A2373 60.866 103.631 99.425 1.00 38.16 C
ATOM 12 O2' A A2373 60.886 104.610 98.411 1.00 37.87 O
ATOM 13 C1' A A2373 61.070 104.235 100.817 1.00 39.84 C
ATOM 14 N9 A A2373 62.461 104.402 101.238 1.00 40.63 N
ATOM 15 C8 A A2373 63.514 103.543 101.046 1.00 41.02 C
ATOM 16 N7 A A2373 64.647 103.979 101.537 1.00 42.09 N
ATOM 17 C5 A A2373 64.320 105.208 102.092 1.00 41.91 C
ATOM 18 C6 A A2373 65.089 106.180 102.760 1.00 41.38 C
ATOM 19 N6 A A2373 66.398 106.062 102.989 1.00 42.46 N
ATOM 20 N1 A A2373 64.460 107.293 103.186 1.00 40.95 N
ATOM 21 C2 A A2373 63.150 107.414 102.953 1.00 41.95 C
ATOM 22 N3 A A2373 62.320 106.574 102.335 1.00 42.70 N
ATOM 23 C4 A A2373 62.976 105.478 101.922 1.00 41.77 C
ATOM 24 P C A2374 57.405 103.920 98.327 1.00 36.13 P
ATOM 25 OP1 C A2374 57.714 102.702 97.530 1.00 38.79 O
ATOM 26 OP2 C A2374 57.412 105.254 97.680 1.00 33.24 O
ATOM 27 O5' C A2374 55.954 103.700 98.945 1.00 34.71 O
TER
ATOM 1 O3' C B2371 67.397 99.652 106.060 1.00 39.75 O
ATOM 2 P U B2372 67.110 100.060 104.533 1.00 41.33 P
ATOM 3 OP1 U B2372 67.389 98.861 103.702 1.00 40.92 O
ATOM 4 OP2 U B2372 67.804 101.342 104.236 1.00 38.98 O
ATOM 5 O5' U B2372 65.541 100.320 104.494 1.00 40.92 O
ATOM 6 C5' U B2372 64.608 99.276 104.827 1.00 40.68 C
ATOM 7 C4' U B2372 63.215 99.842 104.943 1.00 40.13 C
ATOM 8 O4' U B2372 63.198 100.867 105.963 1.00 40.80 O
ATOM 9 C3' U B2372 62.721 100.590 103.722 1.00 38.75 C
ATOM 10 O3' U B2372 62.227 99.677 102.766 1.00 38.89 O
ATOM 11 C2' U B2372 61.597 101.445 104.293 1.00 40.07 C
ATOM 12 O2' U B2372 60.383 100.732 104.425 1.00 39.53 O
ATOM 13 C1' U B2372 62.140 101.771 105.689 1.00 40.71 C
ATOM 14 N1 U B2372 62.608 103.154 105.883 1.00 39.14 N
ATOM 15 C2 U B2372 61.653 104.111 106.153 1.00 38.11 C
ATOM 16 O2 U B2372 60.467 103.858 106.216 1.00 37.32 O
ATOM 17 N3 U B2372 62.138 105.378 106.342 1.00 38.88 N
ATOM 18 C4 U B2372 63.453 105.782 106.285 1.00 39.82 C
ATOM 19 O4 U B2372 63.735 106.967 106.488 1.00 37.84 O
ATOM 20 C5 U B2372 64.381 104.734 105.994 1.00 39.91 C
ATOM 21 C6 U B2372 63.938 103.489 105.807 1.00 39.51 C
ATOM 22 P A B2373 62.540 99.901 101.215 1.00 40.76 P
ATOM 23 OP1 A B2373 62.098 98.673 100.517 1.00 43.28 O
ATOM 24 OP2 A B2373 63.931 100.377 101.051 1.00 40.50 O
ATOM 25 O5' A B2373 61.562 101.073 100.779 1.00 39.65 O
TER
Atoms:
OP1: (62.098,98.673,100.517)
OP2: (63.931,100.377,101.051)
C3': (59.504,102.971,99.594)
C1': (61.070,104.235,100.817)
C5': (60.175,101.042,101.132)
O4': (60.457,103.348,101.727)
C8: (63.514,103.543,101.046)
O2': (60.886,104.610,98.411)
C6: (65.089,106.180,102.760)
C5: (64.320,105.208,102.092)
C4: (62.976,105.478,101.922)
P: (62.540,99.901,101.215)
C4': (59.592,102.426,101.010)
C2': (60.866,103.631,99.425)
C2: (63.150,107.414,102.953)
N1: (64.460,107.293,103.186)
N3: (62.320,106.574,102.335)
N6: (66.398,106.062,102.989)
N7: (64.647,103.979,101.537)
N9: (62.461,104.402,101.238)
O5': (61.562,101.073,100.779)
O3': (58.433,103.922,99.557)
OP2: (63.931,100.377,101.051)
C3': (59.504,102.971,99.594)
C1': (61.070,104.235,100.817)
C5': (60.175,101.042,101.132)
O4': (60.457,103.348,101.727)
C8: (63.514,103.543,101.046)
O2': (60.886,104.610,98.411)
C6: (65.089,106.180,102.760)
C5: (64.320,105.208,102.092)
C4: (62.976,105.478,101.922)
P: (62.540,99.901,101.215)
C4': (59.592,102.426,101.010)
C2': (60.866,103.631,99.425)
C2: (63.150,107.414,102.953)
N1: (64.460,107.293,103.186)
N3: (62.320,106.574,102.335)
N6: (66.398,106.062,102.989)
N7: (64.647,103.979,101.537)
N9: (62.461,104.402,101.238)
O5': (61.562,101.073,100.779)
O3': (58.433,103.922,99.557)
C4: (63.453,105.782,106.285)
N3: (62.138,105.378,106.342)
OP1: (67.389,98.861,103.702)
OP2: (67.804,101.342,104.236)
C2: (61.653,104.111,106.153)
C1': (62.140,101.771,105.689)
C3': (62.721,100.590,103.722)
O5': (65.541,100.320,104.494)
O4': (63.198,100.867,105.963)
C5': (64.608,99.276,104.827)
P: (67.110,100.060,104.533)
C4': (63.215,99.842,104.943)
C2': (61.597,101.445,104.293)
O2': (60.383,100.732,104.425)
N1: (62.608,103.154,105.883)
O4: (63.735,106.967,106.488)
O2: (60.467,103.858,106.216)
C6: (63.938,103.489,105.807)
C5: (64.381,104.734,105.994)
O3': (62.227,99.677,102.766)
N3: (62.138,105.378,106.342)
OP1: (67.389,98.861,103.702)
OP2: (67.804,101.342,104.236)
C2: (61.653,104.111,106.153)
C1': (62.140,101.771,105.689)
C3': (62.721,100.590,103.722)
O5': (65.541,100.320,104.494)
O4': (63.198,100.867,105.963)
C5': (64.608,99.276,104.827)
P: (67.110,100.060,104.533)
C4': (63.215,99.842,104.943)
C2': (61.597,101.445,104.293)
O2': (60.383,100.732,104.425)
N1: (62.608,103.154,105.883)
O4: (63.735,106.967,106.488)
O2: (60.467,103.858,106.216)
C6: (63.938,103.489,105.807)
C5: (64.381,104.734,105.994)
O3': (62.227,99.677,102.766)
Image (generated by PyMOL):