ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQP:0222:0221

Extra

PDB:
ATOM 1 O3' U A 221 49.576 106.737 20.776 1.00 44.06 O
ATOM 2 P A A 222 49.339 106.854 19.193 1.00 45.96 P
ATOM 3 OP1 A A 222 48.338 107.938 19.028 1.00 42.54 O
ATOM 4 OP2 A A 222 49.091 105.519 18.588 1.00 44.42 O
ATOM 5 O5' A A 222 50.749 107.347 18.651 1.00 45.10 O
ATOM 6 C5' A A 222 51.348 108.536 19.183 1.00 45.00 C
ATOM 7 C4' A A 222 52.822 108.541 18.905 1.00 44.35 C
ATOM 8 O4' A A 222 53.471 107.478 19.648 1.00 41.20 O
ATOM 9 C3' A A 222 53.209 108.258 17.468 1.00 44.06 C
ATOM 10 O3' A A 222 53.026 109.406 16.650 1.00 48.52 O
ATOM 11 C2' A A 222 54.660 107.819 17.621 1.00 43.38 C
ATOM 12 O2' A A 222 55.564 108.888 17.846 1.00 43.91 O
ATOM 13 C1' A A 222 54.574 106.987 18.902 1.00 41.82 C
ATOM 14 N9 A A 222 54.349 105.575 18.614 1.00 39.84 N
ATOM 15 C8 A A 222 53.152 104.909 18.466 1.00 39.10 C
ATOM 16 N7 A A 222 53.292 103.634 18.202 1.00 39.17 N
ATOM 17 C5 A A 222 54.668 103.447 18.176 1.00 37.12 C
ATOM 18 C6 A A 222 55.459 102.316 17.953 1.00 37.35 C
ATOM 19 N6 A A 222 54.963 101.103 17.712 1.00 40.63 N
ATOM 20 N1 A A 222 56.801 102.468 17.990 1.00 38.86 N
ATOM 21 C2 A A 222 57.301 103.682 18.247 1.00 38.02 C
ATOM 22 N3 A A 222 56.657 104.823 18.481 1.00 39.23 N
ATOM 23 C4 A A 222 55.328 104.634 18.427 1.00 37.87 C
ATOM 24 P C A 223 53.229 109.287 15.061 1.00 49.20 P
ATOM 25 OP1 C A 223 53.146 110.671 14.526 1.00 53.68 O
ATOM 26 OP2 C A 223 52.356 108.225 14.494 1.00 49.18 O
ATOM 27 O5' C A 223 54.737 108.804 14.956 1.00 49.66 O
TER

ATOM 1 O3' A B 220 48.164 100.978 21.987 1.00 41.27 O
ATOM 2 P U B 221 48.362 101.751 20.597 1.00 42.12 P
ATOM 3 OP1 U B 221 47.010 102.166 20.162 1.00 39.85 O
ATOM 4 OP2 U B 221 49.229 100.937 19.694 1.00 36.30 O
ATOM 5 O5' U B 221 49.160 103.060 21.024 1.00 42.10 O
ATOM 6 C5' U B 221 48.568 103.995 21.939 1.00 41.57 C
ATOM 7 C4' U B 221 49.596 104.981 22.404 1.00 43.19 C
ATOM 8 O4' U B 221 50.627 104.309 23.169 1.00 42.44 O
ATOM 9 C3' U B 221 50.363 105.677 21.296 1.00 42.29 C
ATOM 10 O3' U B 221 49.576 106.737 20.776 1.00 44.06 O
ATOM 11 C2' U B 221 51.601 106.160 22.036 1.00 41.00 C
ATOM 12 O2' U B 221 51.318 107.298 22.821 1.00 42.65 O
ATOM 13 C1' U B 221 51.861 104.981 22.980 1.00 42.11 C
ATOM 14 N1 U B 221 52.841 104.011 22.477 1.00 42.68 N
ATOM 15 C2 U B 221 54.172 104.230 22.777 1.00 43.58 C
ATOM 16 O2 U B 221 54.558 105.194 23.419 1.00 47.68 O
ATOM 17 N3 U B 221 55.036 103.280 22.295 1.00 42.17 N
ATOM 18 C4 U B 221 54.712 102.167 21.545 1.00 42.14 C
ATOM 19 O4 U B 221 55.606 101.408 21.173 1.00 43.05 O
ATOM 20 C5 U B 221 53.319 102.013 21.273 1.00 40.55 C
ATOM 21 C6 U B 221 52.452 102.915 21.735 1.00 42.16 C
ATOM 22 P A B 222 49.339 106.854 19.193 1.00 45.96 P
ATOM 23 OP1 A B 222 48.338 107.938 19.028 1.00 42.54 O
ATOM 24 OP2 A B 222 49.091 105.519 18.588 1.00 44.42 O
ATOM 25 O5' A B 222 50.749 107.347 18.651 1.00 45.10 O
TER

Atoms:
OP1: (48.338,107.938,19.028)
OP2: (49.091,105.519,18.588)
C3': (53.209,108.258,17.468)
C1': (54.574,106.987,18.902)
C5': (51.348,108.536,19.183)
O4': (53.471,107.478,19.648)
C8: (53.152,104.909,18.466)
O2': (55.564,108.888,17.846)
C6: (55.459,102.316,17.953)
C5: (54.668,103.447,18.176)
C4: (55.328,104.634,18.427)
P: (49.339,106.854,19.193)
C4': (52.822,108.541,18.905)
C2': (54.660,107.819,17.621)
C2: (57.301,103.682,18.247)
N1: (56.801,102.468,17.990)
N3: (56.657,104.823,18.481)
N6: (54.963,101.103,17.712)
N7: (53.292,103.634,18.202)
N9: (54.349,105.575,18.614)
O5': (50.749,107.347,18.651)
O3': (53.026,109.406,16.650)
C4: (54.712,102.167,21.545)
N3: (55.036,103.280,22.295)
OP1: (47.010,102.166,20.162)
OP2: (49.229,100.937,19.694)
C2: (54.172,104.230,22.777)
C1': (51.861,104.981,22.980)
C3': (50.363,105.677,21.296)
O5': (49.160,103.060,21.024)
O4': (50.627,104.309,23.169)
C5': (48.568,103.995,21.939)
P: (48.362,101.751,20.597)
C4': (49.596,104.981,22.404)
C2': (51.601,106.160,22.036)
O2': (51.318,107.298,22.821)
N1: (52.841,104.011,22.477)
O4: (55.606,101.408,21.173)
O2: (54.558,105.194,23.419)
C6: (52.452,102.915,21.735)
C5: (53.319,102.013,21.273)
O3': (49.576,106.737,20.776)
Image (generated by PyMOL):
PyMOL image
show in jmol