Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0617:0607
Extra
PDB:
ATOM 1 P A A 617 39.294 112.641 95.337 1.00 26.03 P
ATOM 2 OP1 A A 617 39.089 111.491 96.238 1.00 26.38 O
ATOM 3 OP2 A A 617 38.632 112.657 94.020 1.00 28.01 O
ATOM 4 O5' A A 617 38.921 113.975 96.134 1.00 26.48 O
ATOM 5 C5' A A 617 38.470 115.170 95.452 1.00 26.11 C
ATOM 6 C4' A A 617 39.016 116.409 96.137 1.00 28.79 C
ATOM 7 O4' A A 617 38.667 116.351 97.545 1.00 31.09 O
ATOM 8 C3' A A 617 40.533 116.579 96.145 1.00 29.82 C
ATOM 9 O3' A A 617 41.021 117.194 94.959 1.00 29.26 O
ATOM 10 C2' A A 617 40.751 117.479 97.351 1.00 31.69 C
ATOM 11 O2' A A 617 40.468 118.839 97.085 1.00 35.19 O
ATOM 12 C1' A A 617 39.706 116.933 98.323 1.00 31.35 C
ATOM 13 N9 A A 617 40.244 115.916 99.231 1.00 31.33 N
ATOM 14 C8 A A 617 39.921 114.582 99.298 1.00 31.56 C
ATOM 15 N7 A A 617 40.574 113.928 100.225 1.00 31.31 N
ATOM 16 C5 A A 617 41.383 114.892 100.809 1.00 30.17 C
ATOM 17 C6 A A 617 42.314 114.832 101.851 1.00 30.12 C
ATOM 18 N6 A A 617 42.600 113.717 102.522 1.00 31.78 N
ATOM 19 N1 A A 617 42.953 115.968 102.187 1.00 28.66 N
ATOM 20 C2 A A 617 42.669 117.082 101.514 1.00 29.31 C
ATOM 21 N3 A A 617 41.815 117.267 100.518 1.00 30.99 N
ATOM 22 C4 A A 617 41.193 116.118 100.207 1.00 30.61 C
ATOM 23 P A A 618 42.365 116.643 94.260 1.00 32.58 P
ATOM 24 OP1 A A 618 42.520 117.439 93.017 1.00 32.51 O
ATOM 25 OP2 A A 618 42.326 115.164 94.170 1.00 31.87 O
ATOM 26 O5' A A 618 43.548 116.981 95.279 1.00 31.50 O
TER
ATOM 1 O3' G B 606 30.881 113.786 99.747 1.00 37.52 O
ATOM 2 P U B 607 32.062 113.955 100.813 1.00 37.73 P
ATOM 3 OP1 U B 607 32.789 112.662 100.798 1.00 33.94 O
ATOM 4 OP2 U B 607 31.518 114.490 102.096 1.00 35.75 O
ATOM 5 O5' U B 607 32.993 115.078 100.173 1.00 37.39 O
ATOM 6 C5' U B 607 32.500 116.411 99.935 1.00 35.10 C
ATOM 7 C4' U B 607 33.655 117.367 99.769 1.00 34.71 C
ATOM 8 O4' U B 607 34.464 117.323 100.969 1.00 34.69 O
ATOM 9 C3' U B 607 34.638 117.044 98.654 1.00 34.64 C
ATOM 10 O3' U B 607 34.179 117.570 97.412 1.00 32.49 O
ATOM 11 C2' U B 607 35.905 117.753 99.121 1.00 36.57 C
ATOM 12 O2' U B 607 35.889 119.144 98.873 1.00 38.22 O
ATOM 13 C1' U B 607 35.817 117.566 100.635 1.00 35.71 C
ATOM 14 N1 U B 607 36.651 116.501 101.208 1.00 35.22 N
ATOM 15 C2 U B 607 37.928 116.839 101.609 1.00 36.65 C
ATOM 16 O2 U B 607 38.411 117.948 101.429 1.00 37.95 O
ATOM 17 N3 U B 607 38.626 115.833 102.223 1.00 36.47 N
ATOM 18 C4 U B 607 38.194 114.548 102.457 1.00 36.59 C
ATOM 19 O4 U B 607 38.896 113.785 103.123 1.00 37.21 O
ATOM 20 C5 U B 607 36.886 114.265 101.968 1.00 36.28 C
ATOM 21 C6 U B 607 36.179 115.227 101.373 1.00 35.73 C
ATOM 22 P A B 608 33.801 116.575 96.212 1.00 31.87 P
ATOM 23 OP1 A B 608 32.632 117.142 95.503 1.00 31.10 O
ATOM 24 OP2 A B 608 33.731 115.201 96.745 1.00 33.33 O
ATOM 25 O5' A B 608 35.053 116.648 95.236 1.00 30.92 O
TER
ATOM 2 OP1 A A 617 39.089 111.491 96.238 1.00 26.38 O
ATOM 3 OP2 A A 617 38.632 112.657 94.020 1.00 28.01 O
ATOM 4 O5' A A 617 38.921 113.975 96.134 1.00 26.48 O
ATOM 5 C5' A A 617 38.470 115.170 95.452 1.00 26.11 C
ATOM 6 C4' A A 617 39.016 116.409 96.137 1.00 28.79 C
ATOM 7 O4' A A 617 38.667 116.351 97.545 1.00 31.09 O
ATOM 8 C3' A A 617 40.533 116.579 96.145 1.00 29.82 C
ATOM 9 O3' A A 617 41.021 117.194 94.959 1.00 29.26 O
ATOM 10 C2' A A 617 40.751 117.479 97.351 1.00 31.69 C
ATOM 11 O2' A A 617 40.468 118.839 97.085 1.00 35.19 O
ATOM 12 C1' A A 617 39.706 116.933 98.323 1.00 31.35 C
ATOM 13 N9 A A 617 40.244 115.916 99.231 1.00 31.33 N
ATOM 14 C8 A A 617 39.921 114.582 99.298 1.00 31.56 C
ATOM 15 N7 A A 617 40.574 113.928 100.225 1.00 31.31 N
ATOM 16 C5 A A 617 41.383 114.892 100.809 1.00 30.17 C
ATOM 17 C6 A A 617 42.314 114.832 101.851 1.00 30.12 C
ATOM 18 N6 A A 617 42.600 113.717 102.522 1.00 31.78 N
ATOM 19 N1 A A 617 42.953 115.968 102.187 1.00 28.66 N
ATOM 20 C2 A A 617 42.669 117.082 101.514 1.00 29.31 C
ATOM 21 N3 A A 617 41.815 117.267 100.518 1.00 30.99 N
ATOM 22 C4 A A 617 41.193 116.118 100.207 1.00 30.61 C
ATOM 23 P A A 618 42.365 116.643 94.260 1.00 32.58 P
ATOM 24 OP1 A A 618 42.520 117.439 93.017 1.00 32.51 O
ATOM 25 OP2 A A 618 42.326 115.164 94.170 1.00 31.87 O
ATOM 26 O5' A A 618 43.548 116.981 95.279 1.00 31.50 O
TER
ATOM 1 O3' G B 606 30.881 113.786 99.747 1.00 37.52 O
ATOM 2 P U B 607 32.062 113.955 100.813 1.00 37.73 P
ATOM 3 OP1 U B 607 32.789 112.662 100.798 1.00 33.94 O
ATOM 4 OP2 U B 607 31.518 114.490 102.096 1.00 35.75 O
ATOM 5 O5' U B 607 32.993 115.078 100.173 1.00 37.39 O
ATOM 6 C5' U B 607 32.500 116.411 99.935 1.00 35.10 C
ATOM 7 C4' U B 607 33.655 117.367 99.769 1.00 34.71 C
ATOM 8 O4' U B 607 34.464 117.323 100.969 1.00 34.69 O
ATOM 9 C3' U B 607 34.638 117.044 98.654 1.00 34.64 C
ATOM 10 O3' U B 607 34.179 117.570 97.412 1.00 32.49 O
ATOM 11 C2' U B 607 35.905 117.753 99.121 1.00 36.57 C
ATOM 12 O2' U B 607 35.889 119.144 98.873 1.00 38.22 O
ATOM 13 C1' U B 607 35.817 117.566 100.635 1.00 35.71 C
ATOM 14 N1 U B 607 36.651 116.501 101.208 1.00 35.22 N
ATOM 15 C2 U B 607 37.928 116.839 101.609 1.00 36.65 C
ATOM 16 O2 U B 607 38.411 117.948 101.429 1.00 37.95 O
ATOM 17 N3 U B 607 38.626 115.833 102.223 1.00 36.47 N
ATOM 18 C4 U B 607 38.194 114.548 102.457 1.00 36.59 C
ATOM 19 O4 U B 607 38.896 113.785 103.123 1.00 37.21 O
ATOM 20 C5 U B 607 36.886 114.265 101.968 1.00 36.28 C
ATOM 21 C6 U B 607 36.179 115.227 101.373 1.00 35.73 C
ATOM 22 P A B 608 33.801 116.575 96.212 1.00 31.87 P
ATOM 23 OP1 A B 608 32.632 117.142 95.503 1.00 31.10 O
ATOM 24 OP2 A B 608 33.731 115.201 96.745 1.00 33.33 O
ATOM 25 O5' A B 608 35.053 116.648 95.236 1.00 30.92 O
TER
Atoms:
OP1: (39.089,111.491,96.238)
OP2: (38.632,112.657,94.020)
C3': (40.533,116.579,96.145)
C1': (39.706,116.933,98.323)
C5': (38.470,115.170,95.452)
O4': (38.667,116.351,97.545)
C8: (39.921,114.582,99.298)
O2': (40.468,118.839,97.085)
C6: (42.314,114.832,101.851)
C5: (41.383,114.892,100.809)
C4: (41.193,116.118,100.207)
P: (39.294,112.641,95.337)
C4': (39.016,116.409,96.137)
C2': (40.751,117.479,97.351)
C2: (42.669,117.082,101.514)
N1: (42.953,115.968,102.187)
N3: (41.815,117.267,100.518)
N6: (42.600,113.717,102.522)
N7: (40.574,113.928,100.225)
N9: (40.244,115.916,99.231)
O5': (38.921,113.975,96.134)
O3': (41.021,117.194,94.959)
OP2: (38.632,112.657,94.020)
C3': (40.533,116.579,96.145)
C1': (39.706,116.933,98.323)
C5': (38.470,115.170,95.452)
O4': (38.667,116.351,97.545)
C8: (39.921,114.582,99.298)
O2': (40.468,118.839,97.085)
C6: (42.314,114.832,101.851)
C5: (41.383,114.892,100.809)
C4: (41.193,116.118,100.207)
P: (39.294,112.641,95.337)
C4': (39.016,116.409,96.137)
C2': (40.751,117.479,97.351)
C2: (42.669,117.082,101.514)
N1: (42.953,115.968,102.187)
N3: (41.815,117.267,100.518)
N6: (42.600,113.717,102.522)
N7: (40.574,113.928,100.225)
N9: (40.244,115.916,99.231)
O5': (38.921,113.975,96.134)
O3': (41.021,117.194,94.959)
C4: (38.194,114.548,102.457)
N3: (38.626,115.833,102.223)
OP1: (32.789,112.662,100.798)
OP2: (31.518,114.490,102.096)
C2: (37.928,116.839,101.609)
C1': (35.817,117.566,100.635)
C3': (34.638,117.044,98.654)
O5': (32.993,115.078,100.173)
O4': (34.464,117.323,100.969)
C5': (32.500,116.411,99.935)
P: (32.062,113.955,100.813)
C4': (33.655,117.367,99.769)
C2': (35.905,117.753,99.121)
O2': (35.889,119.144,98.873)
N1: (36.651,116.501,101.208)
O4: (38.896,113.785,103.123)
O2: (38.411,117.948,101.429)
C6: (36.179,115.227,101.373)
C5: (36.886,114.265,101.968)
O3': (34.179,117.570,97.412)
N3: (38.626,115.833,102.223)
OP1: (32.789,112.662,100.798)
OP2: (31.518,114.490,102.096)
C2: (37.928,116.839,101.609)
C1': (35.817,117.566,100.635)
C3': (34.638,117.044,98.654)
O5': (32.993,115.078,100.173)
O4': (34.464,117.323,100.969)
C5': (32.500,116.411,99.935)
P: (32.062,113.955,100.813)
C4': (33.655,117.367,99.769)
C2': (35.905,117.753,99.121)
O2': (35.889,119.144,98.873)
N1: (36.651,116.501,101.208)
O4: (38.896,113.785,103.123)
O2: (38.411,117.948,101.429)
C6: (36.179,115.227,101.373)
C5: (36.886,114.265,101.968)
O3': (34.179,117.570,97.412)
Image (generated by PyMOL):