Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12800:12842
Extra
PDB:
ATOM 1 O3' U A2799 24.618 58.368 47.884 1.00 49.48 O
ATOM 2 P A A2800 25.115 58.981 49.275 1.00 54.52 P
ATOM 3 OP1 A A2800 25.810 60.278 48.951 1.00 55.03 O
ATOM 4 OP2 A A2800 25.855 57.912 49.993 1.00 53.92 O
ATOM 5 O5' A A2800 23.752 59.265 50.042 1.00 54.74 O
ATOM 6 C5' A A2800 22.659 59.841 49.370 1.00 55.18 C
ATOM 7 C4' A A2800 21.461 59.962 50.258 1.00 55.31 C
ATOM 8 O4' A A2800 20.787 58.669 50.357 1.00 54.84 O
ATOM 9 C3' A A2800 21.746 60.414 51.704 1.00 55.35 C
ATOM 10 O3' A A2800 20.839 61.471 52.084 1.00 55.91 O
ATOM 11 C2' A A2800 21.425 59.156 52.509 1.00 54.79 C
ATOM 12 O2' A A2800 20.990 59.422 53.812 1.00 54.87 O
ATOM 13 C1' A A2800 20.322 58.551 51.658 1.00 54.74 C
ATOM 14 N9 A A2800 19.975 57.155 51.946 1.00 54.18 N
ATOM 15 C8 A A2800 18.706 56.785 52.312 1.00 54.17 C
ATOM 16 N7 A A2800 18.518 55.543 52.574 1.00 53.67 N
ATOM 17 C5 A A2800 19.773 55.033 52.360 1.00 53.30 C
ATOM 18 C6 A A2800 20.250 53.722 52.459 1.00 52.71 C
ATOM 19 N6 A A2800 19.453 52.695 52.829 1.00 52.38 N
ATOM 20 N1 A A2800 21.568 53.530 52.173 1.00 52.48 N
ATOM 21 C2 A A2800 22.317 54.551 51.825 1.00 52.82 C
ATOM 22 N3 A A2800 21.972 55.811 51.691 1.00 53.38 N
ATOM 23 C4 A A2800 20.685 55.995 51.978 1.00 53.60 C
ATOM 24 P A A2801 21.312 63.004 52.004 1.00 58.54 P
ATOM 25 OP1 A A2801 22.275 63.093 50.886 1.00 58.54 O
ATOM 26 OP2 A A2801 21.757 63.397 53.337 1.00 58.57 O
ATOM 27 O5' A A2801 19.982 63.803 51.637 1.00 59.12 O
TER
ATOM 1 O3' C B2841 25.538 52.153 57.063 1.00 45.84 O
ATOM 2 P U B2842 24.983 51.766 55.618 1.00 48.37 P
ATOM 3 OP1 U B2842 25.730 50.531 55.190 1.00 47.85 O
ATOM 4 OP2 U B2842 25.055 53.002 54.773 1.00 48.89 O
ATOM 5 O5' U B2842 23.458 51.432 55.892 1.00 48.40 O
ATOM 6 C5' U B2842 23.070 50.307 56.643 1.00 47.98 C
ATOM 7 C4' U B2842 21.599 50.357 56.947 1.00 48.17 C
ATOM 8 O4' U B2842 21.264 51.616 57.552 1.00 48.66 O
ATOM 9 C3' U B2842 20.673 50.281 55.759 1.00 48.32 C
ATOM 10 O3' U B2842 20.577 48.955 55.248 1.00 47.87 O
ATOM 11 C2' U B2842 19.375 50.864 56.338 1.00 48.68 C
ATOM 12 O2' U B2842 18.671 49.911 57.136 1.00 48.37 O
ATOM 13 C1' U B2842 19.932 51.936 57.273 1.00 48.96 C
ATOM 14 N1 U B2842 19.912 53.250 56.680 1.00 49.51 N
ATOM 15 C2 U B2842 18.775 53.981 56.880 1.00 49.94 C
ATOM 16 O2 U B2842 17.860 53.475 57.491 1.00 49.84 O
ATOM 17 N3 U B2842 18.772 55.249 56.358 1.00 50.48 N
ATOM 18 C4 U B2842 19.837 55.810 55.663 1.00 50.60 C
ATOM 19 O4 U B2842 19.788 56.950 55.197 1.00 51.11 O
ATOM 20 C5 U B2842 20.985 54.962 55.545 1.00 50.11 C
ATOM 21 C6 U B2842 21.004 53.732 56.051 1.00 49.59 C
ATOM 22 P A B2843 19.723 48.612 53.941 1.00 47.91 P
ATOM 23 OP1 A B2843 20.162 47.264 53.496 1.00 47.40 O
ATOM 24 OP2 A B2843 19.840 49.731 53.005 1.00 48.38 O
ATOM 25 O5' A B2843 18.266 48.595 54.525 1.00 48.07 O
TER
ATOM 2 P A A2800 25.115 58.981 49.275 1.00 54.52 P
ATOM 3 OP1 A A2800 25.810 60.278 48.951 1.00 55.03 O
ATOM 4 OP2 A A2800 25.855 57.912 49.993 1.00 53.92 O
ATOM 5 O5' A A2800 23.752 59.265 50.042 1.00 54.74 O
ATOM 6 C5' A A2800 22.659 59.841 49.370 1.00 55.18 C
ATOM 7 C4' A A2800 21.461 59.962 50.258 1.00 55.31 C
ATOM 8 O4' A A2800 20.787 58.669 50.357 1.00 54.84 O
ATOM 9 C3' A A2800 21.746 60.414 51.704 1.00 55.35 C
ATOM 10 O3' A A2800 20.839 61.471 52.084 1.00 55.91 O
ATOM 11 C2' A A2800 21.425 59.156 52.509 1.00 54.79 C
ATOM 12 O2' A A2800 20.990 59.422 53.812 1.00 54.87 O
ATOM 13 C1' A A2800 20.322 58.551 51.658 1.00 54.74 C
ATOM 14 N9 A A2800 19.975 57.155 51.946 1.00 54.18 N
ATOM 15 C8 A A2800 18.706 56.785 52.312 1.00 54.17 C
ATOM 16 N7 A A2800 18.518 55.543 52.574 1.00 53.67 N
ATOM 17 C5 A A2800 19.773 55.033 52.360 1.00 53.30 C
ATOM 18 C6 A A2800 20.250 53.722 52.459 1.00 52.71 C
ATOM 19 N6 A A2800 19.453 52.695 52.829 1.00 52.38 N
ATOM 20 N1 A A2800 21.568 53.530 52.173 1.00 52.48 N
ATOM 21 C2 A A2800 22.317 54.551 51.825 1.00 52.82 C
ATOM 22 N3 A A2800 21.972 55.811 51.691 1.00 53.38 N
ATOM 23 C4 A A2800 20.685 55.995 51.978 1.00 53.60 C
ATOM 24 P A A2801 21.312 63.004 52.004 1.00 58.54 P
ATOM 25 OP1 A A2801 22.275 63.093 50.886 1.00 58.54 O
ATOM 26 OP2 A A2801 21.757 63.397 53.337 1.00 58.57 O
ATOM 27 O5' A A2801 19.982 63.803 51.637 1.00 59.12 O
TER
ATOM 1 O3' C B2841 25.538 52.153 57.063 1.00 45.84 O
ATOM 2 P U B2842 24.983 51.766 55.618 1.00 48.37 P
ATOM 3 OP1 U B2842 25.730 50.531 55.190 1.00 47.85 O
ATOM 4 OP2 U B2842 25.055 53.002 54.773 1.00 48.89 O
ATOM 5 O5' U B2842 23.458 51.432 55.892 1.00 48.40 O
ATOM 6 C5' U B2842 23.070 50.307 56.643 1.00 47.98 C
ATOM 7 C4' U B2842 21.599 50.357 56.947 1.00 48.17 C
ATOM 8 O4' U B2842 21.264 51.616 57.552 1.00 48.66 O
ATOM 9 C3' U B2842 20.673 50.281 55.759 1.00 48.32 C
ATOM 10 O3' U B2842 20.577 48.955 55.248 1.00 47.87 O
ATOM 11 C2' U B2842 19.375 50.864 56.338 1.00 48.68 C
ATOM 12 O2' U B2842 18.671 49.911 57.136 1.00 48.37 O
ATOM 13 C1' U B2842 19.932 51.936 57.273 1.00 48.96 C
ATOM 14 N1 U B2842 19.912 53.250 56.680 1.00 49.51 N
ATOM 15 C2 U B2842 18.775 53.981 56.880 1.00 49.94 C
ATOM 16 O2 U B2842 17.860 53.475 57.491 1.00 49.84 O
ATOM 17 N3 U B2842 18.772 55.249 56.358 1.00 50.48 N
ATOM 18 C4 U B2842 19.837 55.810 55.663 1.00 50.60 C
ATOM 19 O4 U B2842 19.788 56.950 55.197 1.00 51.11 O
ATOM 20 C5 U B2842 20.985 54.962 55.545 1.00 50.11 C
ATOM 21 C6 U B2842 21.004 53.732 56.051 1.00 49.59 C
ATOM 22 P A B2843 19.723 48.612 53.941 1.00 47.91 P
ATOM 23 OP1 A B2843 20.162 47.264 53.496 1.00 47.40 O
ATOM 24 OP2 A B2843 19.840 49.731 53.005 1.00 48.38 O
ATOM 25 O5' A B2843 18.266 48.595 54.525 1.00 48.07 O
TER
Atoms:
OP1: (25.810,60.278,48.951)
OP2: (25.855,57.912,49.993)
C3': (21.746,60.414,51.704)
C1': (20.322,58.551,51.658)
C5': (22.659,59.841,49.370)
O4': (20.787,58.669,50.357)
C8: (18.706,56.785,52.312)
O2': (20.990,59.422,53.812)
C6: (20.250,53.722,52.459)
C5: (19.773,55.033,52.360)
C4: (20.685,55.995,51.978)
P: (25.115,58.981,49.275)
C4': (21.461,59.962,50.258)
C2': (21.425,59.156,52.509)
C2: (22.317,54.551,51.825)
N1: (21.568,53.530,52.173)
N3: (21.972,55.811,51.691)
N6: (19.453,52.695,52.829)
N7: (18.518,55.543,52.574)
N9: (19.975,57.155,51.946)
O5': (23.752,59.265,50.042)
O3': (20.839,61.471,52.084)
OP2: (25.855,57.912,49.993)
C3': (21.746,60.414,51.704)
C1': (20.322,58.551,51.658)
C5': (22.659,59.841,49.370)
O4': (20.787,58.669,50.357)
C8: (18.706,56.785,52.312)
O2': (20.990,59.422,53.812)
C6: (20.250,53.722,52.459)
C5: (19.773,55.033,52.360)
C4: (20.685,55.995,51.978)
P: (25.115,58.981,49.275)
C4': (21.461,59.962,50.258)
C2': (21.425,59.156,52.509)
C2: (22.317,54.551,51.825)
N1: (21.568,53.530,52.173)
N3: (21.972,55.811,51.691)
N6: (19.453,52.695,52.829)
N7: (18.518,55.543,52.574)
N9: (19.975,57.155,51.946)
O5': (23.752,59.265,50.042)
O3': (20.839,61.471,52.084)
C4: (19.837,55.810,55.663)
N3: (18.772,55.249,56.358)
OP1: (25.730,50.531,55.190)
OP2: (25.055,53.002,54.773)
C2: (18.775,53.981,56.880)
C1': (19.932,51.936,57.273)
C3': (20.673,50.281,55.759)
O5': (23.458,51.432,55.892)
O4': (21.264,51.616,57.552)
C5': (23.070,50.307,56.643)
P: (24.983,51.766,55.618)
C4': (21.599,50.357,56.947)
C2': (19.375,50.864,56.338)
O2': (18.671,49.911,57.136)
N1: (19.912,53.250,56.680)
O4: (19.788,56.950,55.197)
O2: (17.860,53.475,57.491)
C6: (21.004,53.732,56.051)
C5: (20.985,54.962,55.545)
O3': (20.577,48.955,55.248)
N3: (18.772,55.249,56.358)
OP1: (25.730,50.531,55.190)
OP2: (25.055,53.002,54.773)
C2: (18.775,53.981,56.880)
C1': (19.932,51.936,57.273)
C3': (20.673,50.281,55.759)
O5': (23.458,51.432,55.892)
O4': (21.264,51.616,57.552)
C5': (23.070,50.307,56.643)
P: (24.983,51.766,55.618)
C4': (21.599,50.357,56.947)
C2': (19.375,50.864,56.338)
O2': (18.671,49.911,57.136)
N1: (19.912,53.250,56.680)
O4: (19.788,56.950,55.197)
O2: (17.860,53.475,57.491)
C6: (21.004,53.732,56.051)
C5: (20.985,54.962,55.545)
O3': (20.577,48.955,55.248)
Image (generated by PyMOL):