ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1QVG:0222:0221

Extra

PDB:
ATOM 1 O3' U A 221 50.241 107.881 21.109 1.00 53.95 O
ATOM 2 P A A 222 50.061 108.039 19.524 1.00 53.64 P
ATOM 3 OP1 A A 222 49.132 109.180 19.306 1.00 51.22 O
ATOM 4 OP2 A A 222 49.737 106.717 18.942 1.00 52.67 O
ATOM 5 O5' A A 222 51.520 108.476 19.066 1.00 52.63 O
ATOM 6 C5' A A 222 52.033 109.752 19.455 1.00 52.35 C
ATOM 7 C4' A A 222 53.512 109.777 19.270 1.00 53.27 C
ATOM 8 O4' A A 222 54.100 108.703 20.040 1.00 53.89 O
ATOM 9 C3' A A 222 53.975 109.487 17.863 1.00 54.07 C
ATOM 10 O3' A A 222 53.890 110.654 17.075 1.00 56.93 O
ATOM 11 C2' A A 222 55.406 109.014 18.081 1.00 53.07 C
ATOM 12 O2' A A 222 56.333 110.062 18.288 1.00 53.40 O
ATOM 13 C1' A A 222 55.244 108.213 19.370 1.00 51.91 C
ATOM 14 N9 A A 222 55.014 106.807 19.109 1.00 49.00 N
ATOM 15 C8 A A 222 53.822 106.141 18.991 1.00 47.33 C
ATOM 16 N7 A A 222 53.966 104.858 18.776 1.00 48.95 N
ATOM 17 C5 A A 222 55.351 104.673 18.754 1.00 47.78 C
ATOM 18 C6 A A 222 56.170 103.522 18.608 1.00 48.09 C
ATOM 19 N6 A A 222 55.698 102.281 18.411 1.00 49.16 N
ATOM 20 N1 A A 222 57.509 103.696 18.670 1.00 47.15 N
ATOM 21 C2 A A 222 57.983 104.933 18.849 1.00 46.50 C
ATOM 22 N3 A A 222 57.326 106.075 18.996 1.00 45.55 N
ATOM 23 C4 A A 222 56.001 105.870 18.946 1.00 47.20 C
ATOM 24 P C A 223 54.111 110.554 15.495 1.00 58.83 P
ATOM 25 OP1 C A 223 53.973 111.940 14.951 1.00 57.40 O
ATOM 26 OP2 C A 223 53.229 109.468 14.985 1.00 58.82 O
ATOM 27 O5' C A 223 55.628 110.065 15.390 1.00 58.47 O
TER

ATOM 1 O3' A B 220 48.836 102.136 22.247 1.00 55.97 O
ATOM 2 P U B 221 49.141 102.959 20.894 1.00 56.61 P
ATOM 3 OP1 U B 221 47.807 103.368 20.350 1.00 55.09 O
ATOM 4 OP2 U B 221 50.099 102.185 20.048 1.00 54.32 O
ATOM 5 O5' U B 221 49.906 104.260 21.392 1.00 54.73 O
ATOM 6 C5' U B 221 49.289 105.175 22.315 1.00 53.35 C
ATOM 7 C4' U B 221 50.306 106.186 22.768 1.00 52.83 C
ATOM 8 O4' U B 221 51.359 105.539 23.533 1.00 53.01 O
ATOM 9 C3' U B 221 51.058 106.843 21.630 1.00 52.07 C
ATOM 10 O3' U B 221 50.241 107.881 21.109 1.00 53.95 O
ATOM 11 C2' U B 221 52.310 107.347 22.329 1.00 50.34 C
ATOM 12 O2' U B 221 52.047 108.503 23.098 1.00 48.41 O
ATOM 13 C1' U B 221 52.586 106.207 23.312 1.00 49.41 C
ATOM 14 N1 U B 221 53.595 105.226 22.882 1.00 46.29 N
ATOM 15 C2 U B 221 54.933 105.532 23.137 1.00 45.80 C
ATOM 16 O2 U B 221 55.288 106.563 23.693 1.00 46.34 O
ATOM 17 N3 U B 221 55.843 104.586 22.722 1.00 42.84 N
ATOM 18 C4 U B 221 55.568 103.400 22.106 1.00 40.85 C
ATOM 19 O4 U B 221 56.496 102.660 21.807 1.00 38.66 O
ATOM 20 C5 U B 221 54.168 103.151 21.878 1.00 42.00 C
ATOM 21 C6 U B 221 53.253 104.053 22.261 1.00 43.74 C
ATOM 22 P A B 222 50.061 108.039 19.524 1.00 53.64 P
ATOM 23 OP1 A B 222 49.132 109.180 19.306 1.00 51.22 O
ATOM 24 OP2 A B 222 49.737 106.717 18.942 1.00 52.67 O
ATOM 25 O5' A B 222 51.520 108.476 19.066 1.00 52.63 O
TER

Atoms:
OP1: (49.132,109.180,19.306)
OP2: (49.737,106.717,18.942)
C3': (53.975,109.487,17.863)
C1': (55.244,108.213,19.370)
C5': (52.033,109.752,19.455)
O4': (54.100,108.703,20.040)
C8: (53.822,106.141,18.991)
O2': (56.333,110.062,18.288)
C6: (56.170,103.522,18.608)
C5: (55.351,104.673,18.754)
C4: (56.001,105.870,18.946)
P: (50.061,108.039,19.524)
C4': (53.512,109.777,19.270)
C2': (55.406,109.014,18.081)
C2: (57.983,104.933,18.849)
N1: (57.509,103.696,18.670)
N3: (57.326,106.075,18.996)
N6: (55.698,102.281,18.411)
N7: (53.966,104.858,18.776)
N9: (55.014,106.807,19.109)
O5': (51.520,108.476,19.066)
O3': (53.890,110.654,17.075)
C4: (55.568,103.400,22.106)
N3: (55.843,104.586,22.722)
OP1: (47.807,103.368,20.350)
OP2: (50.099,102.185,20.048)
C2: (54.933,105.532,23.137)
C1': (52.586,106.207,23.312)
C3': (51.058,106.843,21.630)
O5': (49.906,104.260,21.392)
O4': (51.359,105.539,23.533)
C5': (49.289,105.175,22.315)
P: (49.141,102.959,20.894)
C4': (50.306,106.186,22.768)
C2': (52.310,107.347,22.329)
O2': (52.047,108.503,23.098)
N1: (53.595,105.226,22.882)
O4: (56.496,102.660,21.807)
O2: (55.288,106.563,23.693)
C6: (53.253,104.053,22.261)
C5: (54.168,103.151,21.878)
O3': (50.241,107.881,21.109)
Image (generated by PyMOL):
PyMOL image
show in jmol