ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0293:0333

Extra

PDB:
ATOM 1 O3' G A 292 18.261 137.635 18.753 1.00 67.04 O
ATOM 2 P A A 293 17.385 138.611 19.674 1.00 67.26 P
ATOM 3 OP1 A A 293 17.156 139.855 18.907 1.00 67.40 O
ATOM 4 OP2 A A 293 18.015 138.689 21.011 1.00 68.05 O
ATOM 5 O5' A A 293 15.994 137.852 19.810 1.00 66.50 O
ATOM 6 C5' A A 293 15.391 137.212 18.670 1.00 66.40 C
ATOM 7 C4' A A 293 14.508 136.077 19.118 1.00 66.03 C
ATOM 8 O4' A A 293 15.320 135.040 19.720 1.00 66.45 O
ATOM 9 C3' A A 293 13.498 136.453 20.188 1.00 65.66 C
ATOM 10 O3' A A 293 12.336 137.015 19.588 1.00 64.24 O
ATOM 11 C2' A A 293 13.240 135.125 20.895 1.00 66.09 C
ATOM 12 O2' A A 293 12.295 134.307 20.237 1.00 64.86 O
ATOM 13 C1' A A 293 14.621 134.462 20.812 1.00 67.15 C
ATOM 14 N9 A A 293 15.455 134.581 22.012 1.00 67.84 N
ATOM 15 C8 A A 293 16.140 135.678 22.476 1.00 67.73 C
ATOM 16 N7 A A 293 16.814 135.454 23.577 1.00 67.47 N
ATOM 17 C5 A A 293 16.552 134.121 23.860 1.00 68.77 C
ATOM 18 C6 A A 293 16.971 133.277 24.900 1.00 69.62 C
ATOM 19 N6 A A 293 17.771 133.667 25.895 1.00 70.20 N
ATOM 20 N1 A A 293 16.530 132.000 24.887 1.00 69.11 N
ATOM 21 C2 A A 293 15.721 131.611 23.897 1.00 67.91 C
ATOM 22 N3 A A 293 15.257 132.310 22.869 1.00 68.07 N
ATOM 23 C4 A A 293 15.716 133.573 22.907 1.00 68.04 C
ATOM 24 P A A 294 11.721 138.378 20.165 1.00 63.19 P
ATOM 25 OP1 A A 294 10.743 138.884 19.177 1.00 64.80 O
ATOM 26 OP2 A A 294 12.837 139.255 20.604 1.00 64.02 O
ATOM 27 O5' A A 294 10.891 137.893 21.426 1.00 60.42 O
TER

ATOM 1 O3' C B 332 26.136 141.947 26.878 1.00 47.97 O
ATOM 2 P G B 333 26.393 140.872 25.721 1.00 48.81 P
ATOM 3 OP1 G B 333 27.493 141.375 24.863 1.00 49.40 O
ATOM 4 OP2 G B 333 25.089 140.503 25.122 1.00 49.37 O
ATOM 5 O5' G B 333 26.970 139.614 26.491 1.00 48.87 O
ATOM 6 C5' G B 333 26.800 138.284 25.992 1.00 48.81 C
ATOM 7 C4' G B 333 26.707 137.335 27.154 1.00 50.39 C
ATOM 8 O4' G B 333 25.605 137.748 28.000 1.00 51.87 O
ATOM 9 C3' G B 333 26.441 135.879 26.832 1.00 49.64 C
ATOM 10 O3' G B 333 27.669 135.212 26.591 1.00 48.45 O
ATOM 11 C2' G B 333 25.791 135.393 28.116 1.00 51.83 C
ATOM 12 O2' G B 333 26.760 135.198 29.128 1.00 50.95 O
ATOM 13 C1' G B 333 24.941 136.609 28.503 1.00 53.80 C
ATOM 14 N9 G B 333 23.576 136.629 27.976 1.00 57.63 N
ATOM 15 C8 G B 333 22.982 137.651 27.272 1.00 58.62 C
ATOM 16 N7 G B 333 21.736 137.410 26.968 1.00 59.62 N
ATOM 17 C5 G B 333 21.492 136.149 27.494 1.00 60.86 C
ATOM 18 C6 G B 333 20.309 135.363 27.488 1.00 61.48 C
ATOM 19 O6 G B 333 19.206 135.637 27.004 1.00 62.48 O
ATOM 20 N1 G B 333 20.499 134.147 28.134 1.00 61.96 N
ATOM 21 C2 G B 333 21.676 133.736 28.715 1.00 61.97 C
ATOM 22 N2 G B 333 21.661 132.529 29.299 1.00 63.16 N
ATOM 23 N3 G B 333 22.785 134.456 28.726 1.00 61.22 N
ATOM 24 C4 G B 333 22.622 135.646 28.107 1.00 59.98 C
ATOM 25 P U B 334 27.730 134.001 25.543 1.00 50.71 P
ATOM 26 OP1 U B 334 29.066 133.373 25.657 1.00 51.93 O
ATOM 27 OP2 U B 334 27.275 134.499 24.228 1.00 51.61 O
ATOM 28 O5' U B 334 26.647 132.968 26.080 1.00 51.24 O
TER

Atoms:
OP1: (17.156,139.855,18.907)
OP2: (18.015,138.689,21.011)
C3': (13.498,136.453,20.188)
C1': (14.621,134.462,20.812)
C5': (15.391,137.212,18.670)
O4': (15.320,135.040,19.720)
C8: (16.140,135.678,22.476)
O2': (12.295,134.307,20.237)
C6: (16.971,133.277,24.900)
C5: (16.552,134.121,23.860)
C4: (15.716,133.573,22.907)
P: (17.385,138.611,19.674)
C4': (14.508,136.077,19.118)
C2': (13.240,135.125,20.895)
C2: (15.721,131.611,23.897)
N1: (16.530,132.000,24.887)
N3: (15.257,132.310,22.869)
N6: (17.771,133.667,25.895)
N7: (16.814,135.454,23.577)
N9: (15.455,134.581,22.012)
O5': (15.994,137.852,19.810)
O3': (12.336,137.015,19.588)
OP1: (27.493,141.375,24.863)
OP2: (25.089,140.503,25.122)
C3': (26.441,135.879,26.832)
C1': (24.941,136.609,28.503)
C5': (26.800,138.284,25.992)
O6: (19.206,135.637,27.004)
O4': (25.605,137.748,28.000)
C8: (22.982,137.651,27.272)
C2: (21.676,133.736,28.715)
C6: (20.309,135.363,27.488)
C5: (21.492,136.149,27.494)
C4: (22.622,135.646,28.107)
P: (26.393,140.872,25.721)
C4': (26.707,137.335,27.154)
C2': (25.791,135.393,28.116)
O2': (26.760,135.198,29.128)
N1: (20.499,134.147,28.134)
N2: (21.661,132.529,29.299)
N3: (22.785,134.456,28.726)
N7: (21.736,137.410,26.968)
N9: (23.576,136.629,27.976)
O5': (26.970,139.614,26.491)
O3': (27.669,135.212,26.591)
Image (generated by PyMOL):
PyMOL image
show in jmol