Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OH5:A1587:A1223
Extra
PDB:
ATOM 1 O3' G A1586 33.926 -65.311 2.292 1.00 28.80 O
ATOM 2 P C A1587 34.063 -66.658 1.442 1.00 38.76 P
ATOM 3 OP1 C A1587 32.725 -66.960 0.884 1.00 35.65 O
ATOM 4 OP2 C A1587 34.719 -67.669 2.317 1.00 44.13 O
ATOM 5 O5' C A1587 35.047 -66.229 0.271 1.00 39.08 O
ATOM 6 C5' C A1587 34.543 -65.737 -0.953 1.00 34.40 C
ATOM 7 C4' C A1587 35.286 -64.514 -1.395 1.00 31.80 C
ATOM 8 O4' C A1587 35.221 -63.519 -0.370 1.00 40.74 O
ATOM 9 C3' C A1587 36.771 -64.674 -1.656 1.00 30.69 C
ATOM 10 O3' C A1587 37.030 -65.208 -2.945 1.00 28.76 O
ATOM 11 C2' C A1587 37.292 -63.241 -1.491 1.00 41.78 C
ATOM 12 O2' C A1587 37.186 -62.529 -2.715 1.00 46.21 O
ATOM 13 C1' C A1587 36.292 -62.631 -0.518 1.00 42.47 C
ATOM 14 N1 C A1587 36.858 -62.321 0.800 1.00 36.60 N
ATOM 15 C2 C A1587 37.446 -61.074 0.893 1.00 44.37 C
ATOM 16 O2 C A1587 37.506 -60.372 -0.126 1.00 45.12 O
ATOM 17 N3 C A1587 37.950 -60.683 2.074 1.00 50.50 N
ATOM 18 C4 C A1587 37.837 -61.476 3.138 1.00 40.00 C
ATOM 19 N4 C A1587 38.353 -61.027 4.285 1.00 40.61 N
ATOM 20 C5 C A1587 37.204 -62.745 3.071 1.00 35.71 C
ATOM 21 C6 C A1587 36.712 -63.119 1.889 1.00 35.92 C
ATOM 22 P G A1588 37.962 -66.489 -3.142 1.00 32.63 P
ATOM 23 OP1 G A1588 39.344 -66.073 -2.859 1.00 76.01 O
ATOM 24 OP2 G A1588 37.658 -67.052 -4.475 1.00 45.78 O
ATOM 25 O5' G A1588 37.467 -67.469 -2.027 1.00 21.45 O
TER
ATOM 1 O3' U B1222 40.007 -60.182 6.830 1.00 39.36 O
ATOM 2 P A B1223 39.865 -58.664 6.318 1.00 37.78 P
ATOM 3 OP1 A B1223 40.154 -58.660 4.858 1.00 41.86 O
ATOM 4 OP2 A B1223 40.676 -57.800 7.226 1.00 43.36 O
ATOM 5 O5' A B1223 38.344 -58.386 6.559 1.00 31.57 O
ATOM 6 C5' A B1223 37.849 -58.278 7.869 1.00 37.13 C
ATOM 7 C4' A B1223 36.486 -58.906 8.004 1.00 39.66 C
ATOM 8 O4' A B1223 35.524 -58.223 7.155 1.00 49.58 O
ATOM 9 C3' A B1223 36.379 -60.357 7.607 1.00 28.50 C
ATOM 10 O3' A B1223 36.823 -61.207 8.643 1.00 35.89 O
ATOM 11 C2' A B1223 34.884 -60.493 7.300 1.00 33.11 C
ATOM 12 O2' A B1223 34.131 -60.589 8.497 1.00 30.96 O
ATOM 13 C1' A B1223 34.573 -59.140 6.670 1.00 35.10 C
ATOM 14 N9 A B1223 34.680 -59.168 5.210 1.00 34.39 N
ATOM 15 C8 A B1223 35.808 -58.913 4.497 1.00 40.51 C
ATOM 16 N7 A B1223 35.650 -58.993 3.208 1.00 44.33 N
ATOM 17 C5 A B1223 34.324 -59.309 3.080 1.00 36.95 C
ATOM 18 C6 A B1223 33.560 -59.527 1.946 1.00 35.31 C
ATOM 19 N6 A B1223 34.078 -59.438 0.728 1.00 36.06 N
ATOM 20 N1 A B1223 32.267 -59.834 2.130 1.00 35.29 N
ATOM 21 C2 A B1223 31.808 -59.896 3.382 1.00 35.61 C
ATOM 22 N3 A B1223 32.444 -59.704 4.538 1.00 34.49 N
ATOM 23 C4 A B1223 33.713 -59.406 4.303 1.00 33.86 C
ATOM 24 P A B1224 37.571 -62.581 8.319 1.00 36.50 P
ATOM 25 OP1 A B1224 38.821 -62.614 9.142 1.00 35.13 O
ATOM 26 OP2 A B1224 37.681 -62.678 6.848 1.00 29.73 O
ATOM 27 O5' A B1224 36.545 -63.665 8.865 1.00 28.44 O
TER
ATOM 2 P C A1587 34.063 -66.658 1.442 1.00 38.76 P
ATOM 3 OP1 C A1587 32.725 -66.960 0.884 1.00 35.65 O
ATOM 4 OP2 C A1587 34.719 -67.669 2.317 1.00 44.13 O
ATOM 5 O5' C A1587 35.047 -66.229 0.271 1.00 39.08 O
ATOM 6 C5' C A1587 34.543 -65.737 -0.953 1.00 34.40 C
ATOM 7 C4' C A1587 35.286 -64.514 -1.395 1.00 31.80 C
ATOM 8 O4' C A1587 35.221 -63.519 -0.370 1.00 40.74 O
ATOM 9 C3' C A1587 36.771 -64.674 -1.656 1.00 30.69 C
ATOM 10 O3' C A1587 37.030 -65.208 -2.945 1.00 28.76 O
ATOM 11 C2' C A1587 37.292 -63.241 -1.491 1.00 41.78 C
ATOM 12 O2' C A1587 37.186 -62.529 -2.715 1.00 46.21 O
ATOM 13 C1' C A1587 36.292 -62.631 -0.518 1.00 42.47 C
ATOM 14 N1 C A1587 36.858 -62.321 0.800 1.00 36.60 N
ATOM 15 C2 C A1587 37.446 -61.074 0.893 1.00 44.37 C
ATOM 16 O2 C A1587 37.506 -60.372 -0.126 1.00 45.12 O
ATOM 17 N3 C A1587 37.950 -60.683 2.074 1.00 50.50 N
ATOM 18 C4 C A1587 37.837 -61.476 3.138 1.00 40.00 C
ATOM 19 N4 C A1587 38.353 -61.027 4.285 1.00 40.61 N
ATOM 20 C5 C A1587 37.204 -62.745 3.071 1.00 35.71 C
ATOM 21 C6 C A1587 36.712 -63.119 1.889 1.00 35.92 C
ATOM 22 P G A1588 37.962 -66.489 -3.142 1.00 32.63 P
ATOM 23 OP1 G A1588 39.344 -66.073 -2.859 1.00 76.01 O
ATOM 24 OP2 G A1588 37.658 -67.052 -4.475 1.00 45.78 O
ATOM 25 O5' G A1588 37.467 -67.469 -2.027 1.00 21.45 O
TER
ATOM 1 O3' U B1222 40.007 -60.182 6.830 1.00 39.36 O
ATOM 2 P A B1223 39.865 -58.664 6.318 1.00 37.78 P
ATOM 3 OP1 A B1223 40.154 -58.660 4.858 1.00 41.86 O
ATOM 4 OP2 A B1223 40.676 -57.800 7.226 1.00 43.36 O
ATOM 5 O5' A B1223 38.344 -58.386 6.559 1.00 31.57 O
ATOM 6 C5' A B1223 37.849 -58.278 7.869 1.00 37.13 C
ATOM 7 C4' A B1223 36.486 -58.906 8.004 1.00 39.66 C
ATOM 8 O4' A B1223 35.524 -58.223 7.155 1.00 49.58 O
ATOM 9 C3' A B1223 36.379 -60.357 7.607 1.00 28.50 C
ATOM 10 O3' A B1223 36.823 -61.207 8.643 1.00 35.89 O
ATOM 11 C2' A B1223 34.884 -60.493 7.300 1.00 33.11 C
ATOM 12 O2' A B1223 34.131 -60.589 8.497 1.00 30.96 O
ATOM 13 C1' A B1223 34.573 -59.140 6.670 1.00 35.10 C
ATOM 14 N9 A B1223 34.680 -59.168 5.210 1.00 34.39 N
ATOM 15 C8 A B1223 35.808 -58.913 4.497 1.00 40.51 C
ATOM 16 N7 A B1223 35.650 -58.993 3.208 1.00 44.33 N
ATOM 17 C5 A B1223 34.324 -59.309 3.080 1.00 36.95 C
ATOM 18 C6 A B1223 33.560 -59.527 1.946 1.00 35.31 C
ATOM 19 N6 A B1223 34.078 -59.438 0.728 1.00 36.06 N
ATOM 20 N1 A B1223 32.267 -59.834 2.130 1.00 35.29 N
ATOM 21 C2 A B1223 31.808 -59.896 3.382 1.00 35.61 C
ATOM 22 N3 A B1223 32.444 -59.704 4.538 1.00 34.49 N
ATOM 23 C4 A B1223 33.713 -59.406 4.303 1.00 33.86 C
ATOM 24 P A B1224 37.571 -62.581 8.319 1.00 36.50 P
ATOM 25 OP1 A B1224 38.821 -62.614 9.142 1.00 35.13 O
ATOM 26 OP2 A B1224 37.681 -62.678 6.848 1.00 29.73 O
ATOM 27 O5' A B1224 36.545 -63.665 8.865 1.00 28.44 O
TER
Atoms:
C2: (37.446,-61.074,0.893)
OP1: (32.725,-66.960,0.884)
OP2: (34.719,-67.669,2.317)
C4: (37.837,-61.476,3.138)
O5': (35.047,-66.229,0.271)
C3': (36.771,-64.674,-1.656)
C1': (36.292,-62.631,-0.518)
O4': (35.221,-63.519,-0.370)
C5': (34.543,-65.737,-0.953)
P: (34.063,-66.658,1.442)
O2: (37.506,-60.372,-0.126)
C4': (35.286,-64.514,-1.395)
C2': (37.292,-63.241,-1.491)
O2': (37.186,-62.529,-2.715)
N1: (36.858,-62.321,0.800)
N3: (37.950,-60.683,2.074)
N4: (38.353,-61.027,4.285)
C6: (36.712,-63.119,1.889)
C5: (37.204,-62.745,3.071)
O3': (37.030,-65.208,-2.945)
OP1: (32.725,-66.960,0.884)
OP2: (34.719,-67.669,2.317)
C4: (37.837,-61.476,3.138)
O5': (35.047,-66.229,0.271)
C3': (36.771,-64.674,-1.656)
C1': (36.292,-62.631,-0.518)
O4': (35.221,-63.519,-0.370)
C5': (34.543,-65.737,-0.953)
P: (34.063,-66.658,1.442)
O2: (37.506,-60.372,-0.126)
C4': (35.286,-64.514,-1.395)
C2': (37.292,-63.241,-1.491)
O2': (37.186,-62.529,-2.715)
N1: (36.858,-62.321,0.800)
N3: (37.950,-60.683,2.074)
N4: (38.353,-61.027,4.285)
C6: (36.712,-63.119,1.889)
C5: (37.204,-62.745,3.071)
O3': (37.030,-65.208,-2.945)
OP1: (40.154,-58.660,4.858)
OP2: (40.676,-57.800,7.226)
C3': (36.379,-60.357,7.607)
C1': (34.573,-59.140,6.670)
C5': (37.849,-58.278,7.869)
O4': (35.524,-58.223,7.155)
C8: (35.808,-58.913,4.497)
O2': (34.131,-60.589,8.497)
C6: (33.560,-59.527,1.946)
C5: (34.324,-59.309,3.080)
C4: (33.713,-59.406,4.303)
P: (39.865,-58.664,6.318)
C4': (36.486,-58.906,8.004)
C2': (34.884,-60.493,7.300)
C2: (31.808,-59.896,3.382)
N1: (32.267,-59.834,2.130)
N3: (32.444,-59.704,4.538)
N6: (34.078,-59.438,0.728)
N7: (35.650,-58.993,3.208)
N9: (34.680,-59.168,5.210)
O5': (38.344,-58.386,6.559)
O3': (36.823,-61.207,8.643)
OP2: (40.676,-57.800,7.226)
C3': (36.379,-60.357,7.607)
C1': (34.573,-59.140,6.670)
C5': (37.849,-58.278,7.869)
O4': (35.524,-58.223,7.155)
C8: (35.808,-58.913,4.497)
O2': (34.131,-60.589,8.497)
C6: (33.560,-59.527,1.946)
C5: (34.324,-59.309,3.080)
C4: (33.713,-59.406,4.303)
P: (39.865,-58.664,6.318)
C4': (36.486,-58.906,8.004)
C2': (34.884,-60.493,7.300)
C2: (31.808,-59.896,3.382)
N1: (32.267,-59.834,2.130)
N3: (32.444,-59.704,4.538)
N6: (34.078,-59.438,0.728)
N7: (35.650,-58.993,3.208)
N9: (34.680,-59.168,5.210)
O5': (38.344,-58.386,6.559)
O3': (36.823,-61.207,8.643)
Image (generated by PyMOL):