Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1587:A1223
Extra
PDB:
ATOM 1 O3' G A1586 34.138 -65.117 2.421 1.00 30.91 O
ATOM 2 P C A1587 34.354 -66.552 1.717 1.00 40.23 P
ATOM 3 OP1 C A1587 33.044 -66.990 1.195 1.00 30.97 O
ATOM 4 OP2 C A1587 35.063 -67.427 2.687 1.00 39.65 O
ATOM 5 O5' C A1587 35.321 -66.204 0.515 1.00 36.61 O
ATOM 6 C5' C A1587 34.806 -65.815 -0.736 1.00 30.67 C
ATOM 7 C4' C A1587 35.449 -64.552 -1.212 1.00 29.75 C
ATOM 8 O4' C A1587 35.399 -63.559 -0.180 1.00 34.34 O
ATOM 9 C3' C A1587 36.916 -64.634 -1.565 1.00 29.98 C
ATOM 10 O3' C A1587 37.120 -65.197 -2.858 1.00 31.63 O
ATOM 11 C2' C A1587 37.361 -63.159 -1.452 1.00 36.04 C
ATOM 12 O2' C A1587 37.132 -62.464 -2.663 1.00 43.17 O
ATOM 13 C1' C A1587 36.391 -62.597 -0.426 1.00 32.92 C
ATOM 14 N1 C A1587 37.021 -62.176 0.846 1.00 31.22 N
ATOM 15 C2 C A1587 37.704 -60.965 0.875 1.00 38.86 C
ATOM 16 O2 C A1587 37.854 -60.326 -0.174 1.00 47.71 O
ATOM 17 N3 C A1587 38.225 -60.516 2.025 1.00 40.12 N
ATOM 18 C4 C A1587 38.043 -61.214 3.139 1.00 40.04 C
ATOM 19 N4 C A1587 38.575 -60.741 4.282 1.00 39.83 N
ATOM 20 C5 C A1587 37.313 -62.431 3.140 1.00 36.48 C
ATOM 21 C6 C A1587 36.806 -62.857 1.993 1.00 33.25 C
ATOM 22 P G A1588 38.137 -66.419 -3.103 1.00 33.21 P
ATOM 23 OP1 G A1588 39.504 -65.894 -2.927 1.00 74.41 O
ATOM 24 OP2 G A1588 37.787 -67.030 -4.399 1.00 52.69 O
ATOM 25 O5' G A1588 37.792 -67.406 -1.939 1.00 21.75 O
TER
ATOM 1 O3' U B1222 40.225 -60.044 7.033 1.00 35.67 O
ATOM 2 P A B1223 40.089 -58.550 6.465 1.00 42.39 P
ATOM 3 OP1 A B1223 40.343 -58.600 4.999 1.00 48.54 O
ATOM 4 OP2 A B1223 40.942 -57.674 7.314 1.00 53.77 O
ATOM 5 O5' A B1223 38.572 -58.247 6.740 1.00 35.03 O
ATOM 6 C5' A B1223 38.092 -58.213 8.066 1.00 34.65 C
ATOM 7 C4' A B1223 36.744 -58.866 8.186 1.00 34.07 C
ATOM 8 O4' A B1223 35.780 -58.185 7.339 1.00 44.72 O
ATOM 9 C3' A B1223 36.670 -60.316 7.762 1.00 30.29 C
ATOM 10 O3' A B1223 37.104 -61.180 8.793 1.00 37.26 O
ATOM 11 C2' A B1223 35.191 -60.478 7.425 1.00 31.18 C
ATOM 12 O2' A B1223 34.440 -60.644 8.614 1.00 34.71 O
ATOM 13 C1' A B1223 34.849 -59.110 6.830 1.00 29.56 C
ATOM 14 N9 A B1223 34.949 -59.103 5.366 1.00 33.43 N
ATOM 15 C8 A B1223 36.065 -58.866 4.609 1.00 38.08 C
ATOM 16 N7 A B1223 35.870 -58.941 3.318 1.00 38.17 N
ATOM 17 C5 A B1223 34.533 -59.244 3.223 1.00 34.86 C
ATOM 18 C6 A B1223 33.709 -59.451 2.118 1.00 37.87 C
ATOM 19 N6 A B1223 34.157 -59.366 0.863 1.00 34.26 N
ATOM 20 N1 A B1223 32.402 -59.747 2.361 1.00 39.76 N
ATOM 21 C2 A B1223 31.963 -59.812 3.624 1.00 34.20 C
ATOM 22 N3 A B1223 32.659 -59.617 4.747 1.00 38.25 N
ATOM 23 C4 A B1223 33.948 -59.338 4.473 1.00 37.37 C
ATOM 24 P A B1224 37.791 -62.595 8.463 1.00 36.11 P
ATOM 25 OP1 A B1224 39.023 -62.687 9.305 1.00 36.85 O
ATOM 26 OP2 A B1224 37.923 -62.697 6.984 1.00 28.29 O
ATOM 27 O5' A B1224 36.714 -63.638 8.983 1.00 30.27 O
TER
ATOM 2 P C A1587 34.354 -66.552 1.717 1.00 40.23 P
ATOM 3 OP1 C A1587 33.044 -66.990 1.195 1.00 30.97 O
ATOM 4 OP2 C A1587 35.063 -67.427 2.687 1.00 39.65 O
ATOM 5 O5' C A1587 35.321 -66.204 0.515 1.00 36.61 O
ATOM 6 C5' C A1587 34.806 -65.815 -0.736 1.00 30.67 C
ATOM 7 C4' C A1587 35.449 -64.552 -1.212 1.00 29.75 C
ATOM 8 O4' C A1587 35.399 -63.559 -0.180 1.00 34.34 O
ATOM 9 C3' C A1587 36.916 -64.634 -1.565 1.00 29.98 C
ATOM 10 O3' C A1587 37.120 -65.197 -2.858 1.00 31.63 O
ATOM 11 C2' C A1587 37.361 -63.159 -1.452 1.00 36.04 C
ATOM 12 O2' C A1587 37.132 -62.464 -2.663 1.00 43.17 O
ATOM 13 C1' C A1587 36.391 -62.597 -0.426 1.00 32.92 C
ATOM 14 N1 C A1587 37.021 -62.176 0.846 1.00 31.22 N
ATOM 15 C2 C A1587 37.704 -60.965 0.875 1.00 38.86 C
ATOM 16 O2 C A1587 37.854 -60.326 -0.174 1.00 47.71 O
ATOM 17 N3 C A1587 38.225 -60.516 2.025 1.00 40.12 N
ATOM 18 C4 C A1587 38.043 -61.214 3.139 1.00 40.04 C
ATOM 19 N4 C A1587 38.575 -60.741 4.282 1.00 39.83 N
ATOM 20 C5 C A1587 37.313 -62.431 3.140 1.00 36.48 C
ATOM 21 C6 C A1587 36.806 -62.857 1.993 1.00 33.25 C
ATOM 22 P G A1588 38.137 -66.419 -3.103 1.00 33.21 P
ATOM 23 OP1 G A1588 39.504 -65.894 -2.927 1.00 74.41 O
ATOM 24 OP2 G A1588 37.787 -67.030 -4.399 1.00 52.69 O
ATOM 25 O5' G A1588 37.792 -67.406 -1.939 1.00 21.75 O
TER
ATOM 1 O3' U B1222 40.225 -60.044 7.033 1.00 35.67 O
ATOM 2 P A B1223 40.089 -58.550 6.465 1.00 42.39 P
ATOM 3 OP1 A B1223 40.343 -58.600 4.999 1.00 48.54 O
ATOM 4 OP2 A B1223 40.942 -57.674 7.314 1.00 53.77 O
ATOM 5 O5' A B1223 38.572 -58.247 6.740 1.00 35.03 O
ATOM 6 C5' A B1223 38.092 -58.213 8.066 1.00 34.65 C
ATOM 7 C4' A B1223 36.744 -58.866 8.186 1.00 34.07 C
ATOM 8 O4' A B1223 35.780 -58.185 7.339 1.00 44.72 O
ATOM 9 C3' A B1223 36.670 -60.316 7.762 1.00 30.29 C
ATOM 10 O3' A B1223 37.104 -61.180 8.793 1.00 37.26 O
ATOM 11 C2' A B1223 35.191 -60.478 7.425 1.00 31.18 C
ATOM 12 O2' A B1223 34.440 -60.644 8.614 1.00 34.71 O
ATOM 13 C1' A B1223 34.849 -59.110 6.830 1.00 29.56 C
ATOM 14 N9 A B1223 34.949 -59.103 5.366 1.00 33.43 N
ATOM 15 C8 A B1223 36.065 -58.866 4.609 1.00 38.08 C
ATOM 16 N7 A B1223 35.870 -58.941 3.318 1.00 38.17 N
ATOM 17 C5 A B1223 34.533 -59.244 3.223 1.00 34.86 C
ATOM 18 C6 A B1223 33.709 -59.451 2.118 1.00 37.87 C
ATOM 19 N6 A B1223 34.157 -59.366 0.863 1.00 34.26 N
ATOM 20 N1 A B1223 32.402 -59.747 2.361 1.00 39.76 N
ATOM 21 C2 A B1223 31.963 -59.812 3.624 1.00 34.20 C
ATOM 22 N3 A B1223 32.659 -59.617 4.747 1.00 38.25 N
ATOM 23 C4 A B1223 33.948 -59.338 4.473 1.00 37.37 C
ATOM 24 P A B1224 37.791 -62.595 8.463 1.00 36.11 P
ATOM 25 OP1 A B1224 39.023 -62.687 9.305 1.00 36.85 O
ATOM 26 OP2 A B1224 37.923 -62.697 6.984 1.00 28.29 O
ATOM 27 O5' A B1224 36.714 -63.638 8.983 1.00 30.27 O
TER
Atoms:
C2: (37.704,-60.965,0.875)
OP1: (33.044,-66.990,1.195)
OP2: (35.063,-67.427,2.687)
C4: (38.043,-61.214,3.139)
O5': (35.321,-66.204,0.515)
C3': (36.916,-64.634,-1.565)
C1': (36.391,-62.597,-0.426)
O4': (35.399,-63.559,-0.180)
C5': (34.806,-65.815,-0.736)
P: (34.354,-66.552,1.717)
O2: (37.854,-60.326,-0.174)
C4': (35.449,-64.552,-1.212)
C2': (37.361,-63.159,-1.452)
O2': (37.132,-62.464,-2.663)
N1: (37.021,-62.176,0.846)
N3: (38.225,-60.516,2.025)
N4: (38.575,-60.741,4.282)
C6: (36.806,-62.857,1.993)
C5: (37.313,-62.431,3.140)
O3': (37.120,-65.197,-2.858)
OP1: (33.044,-66.990,1.195)
OP2: (35.063,-67.427,2.687)
C4: (38.043,-61.214,3.139)
O5': (35.321,-66.204,0.515)
C3': (36.916,-64.634,-1.565)
C1': (36.391,-62.597,-0.426)
O4': (35.399,-63.559,-0.180)
C5': (34.806,-65.815,-0.736)
P: (34.354,-66.552,1.717)
O2: (37.854,-60.326,-0.174)
C4': (35.449,-64.552,-1.212)
C2': (37.361,-63.159,-1.452)
O2': (37.132,-62.464,-2.663)
N1: (37.021,-62.176,0.846)
N3: (38.225,-60.516,2.025)
N4: (38.575,-60.741,4.282)
C6: (36.806,-62.857,1.993)
C5: (37.313,-62.431,3.140)
O3': (37.120,-65.197,-2.858)
OP1: (40.343,-58.600,4.999)
OP2: (40.942,-57.674,7.314)
C3': (36.670,-60.316,7.762)
C1': (34.849,-59.110,6.830)
C5': (38.092,-58.213,8.066)
O4': (35.780,-58.185,7.339)
C8: (36.065,-58.866,4.609)
O2': (34.440,-60.644,8.614)
C6: (33.709,-59.451,2.118)
C5: (34.533,-59.244,3.223)
C4: (33.948,-59.338,4.473)
P: (40.089,-58.550,6.465)
C4': (36.744,-58.866,8.186)
C2': (35.191,-60.478,7.425)
C2: (31.963,-59.812,3.624)
N1: (32.402,-59.747,2.361)
N3: (32.659,-59.617,4.747)
N6: (34.157,-59.366,0.863)
N7: (35.870,-58.941,3.318)
N9: (34.949,-59.103,5.366)
O5': (38.572,-58.247,6.740)
O3': (37.104,-61.180,8.793)
OP2: (40.942,-57.674,7.314)
C3': (36.670,-60.316,7.762)
C1': (34.849,-59.110,6.830)
C5': (38.092,-58.213,8.066)
O4': (35.780,-58.185,7.339)
C8: (36.065,-58.866,4.609)
O2': (34.440,-60.644,8.614)
C6: (33.709,-59.451,2.118)
C5: (34.533,-59.244,3.223)
C4: (33.948,-59.338,4.473)
P: (40.089,-58.550,6.465)
C4': (36.744,-58.866,8.186)
C2': (35.191,-60.478,7.425)
C2: (31.963,-59.812,3.624)
N1: (32.402,-59.747,2.361)
N3: (32.659,-59.617,4.747)
N6: (34.157,-59.366,0.863)
N7: (35.870,-58.941,3.318)
N9: (34.949,-59.103,5.366)
O5': (38.572,-58.247,6.740)
O3': (37.104,-61.180,8.793)
Image (generated by PyMOL):