Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3OHJ:A1878:A1852
Extra
PDB:
ATOM 1 O3' C A1877 90.164 -10.169 12.434 1.00 42.55 O
ATOM 2 P C A1878 90.363 -9.588 10.971 1.00 48.13 P
ATOM 3 OP1 C A1878 91.198 -8.374 11.097 1.00 76.75 O
ATOM 4 OP2 C A1878 89.011 -9.452 10.388 1.00 58.00 O
ATOM 5 O5' C A1878 91.191 -10.747 10.226 1.00 67.74 O
ATOM 6 C5' C A1878 92.175 -10.416 9.233 1.00 88.85 C
ATOM 7 C4' C A1878 92.065 -11.259 8.014 1.00 84.77 C
ATOM 8 O4' C A1878 90.741 -11.573 7.678 1.00 90.02 O
ATOM 9 C3' C A1878 92.861 -12.500 7.928 1.00 82.65 C
ATOM 10 O3' C A1878 93.949 -12.440 8.836 1.00 92.85 O
ATOM 11 C2' C A1878 91.832 -13.548 8.364 1.00 79.68 C
ATOM 12 O2' C A1878 91.731 -13.669 9.763 1.00 80.01 O
ATOM 13 C1' C A1878 90.589 -12.932 7.810 1.00 72.19 C
ATOM 14 N1 C A1878 89.252 -13.373 8.166 1.00 65.65 N
ATOM 15 C2 C A1878 88.805 -14.708 8.210 1.00 64.89 C
ATOM 16 O2 C A1878 89.605 -15.637 8.025 1.00 57.94 O
ATOM 17 N3 C A1878 87.484 -14.942 8.496 1.00 62.62 N
ATOM 18 C4 C A1878 86.628 -13.914 8.694 1.00 60.39 C
ATOM 19 N4 C A1878 85.337 -14.153 8.966 1.00 64.66 N
ATOM 20 C5 C A1878 87.047 -12.563 8.624 1.00 49.93 C
ATOM 21 C6 C A1878 88.329 -12.368 8.345 1.00 60.15 C
ATOM 22 P U A1879 95.401 -11.925 8.332 1.00 66.57 P
ATOM 23 OP1 U A1879 96.413 -12.798 8.967 1.00136.99 O
ATOM 24 OP2 U A1879 95.457 -10.464 8.586 1.00138.44 O
ATOM 25 O5' U A1879 95.386 -12.190 6.779 1.00 68.55 O
TER
ATOM 1 O3' G B1851 83.886 -17.479 6.405 1.00 31.29 O
ATOM 2 P A B1852 84.161 -17.842 7.934 1.00 47.34 P
ATOM 3 OP1 A B1852 82.834 -17.985 8.603 1.00 57.41 O
ATOM 4 OP2 A B1852 85.131 -16.850 8.465 1.00 51.07 O
ATOM 5 O5' A B1852 84.852 -19.249 7.821 1.00 39.66 O
ATOM 6 C5' A B1852 85.607 -19.608 6.682 1.00 35.54 C
ATOM 7 C4' A B1852 85.862 -21.069 6.724 1.00 43.16 C
ATOM 8 O4' A B1852 87.306 -21.319 6.744 1.00 41.19 O
ATOM 9 C3' A B1852 85.308 -21.737 7.988 1.00 48.37 C
ATOM 10 O3' A B1852 84.874 -23.062 7.681 1.00 54.24 O
ATOM 11 C2' A B1852 86.544 -21.807 8.863 1.00 48.69 C
ATOM 12 O2' A B1852 86.470 -22.736 9.924 1.00 54.57 O
ATOM 13 C1' A B1852 87.570 -22.195 7.808 1.00 41.82 C
ATOM 14 N9 A B1852 88.951 -22.061 8.224 1.00 45.14 N
ATOM 15 C8 A B1852 89.851 -23.083 8.277 1.00 51.23 C
ATOM 16 N7 A B1852 91.025 -22.739 8.731 1.00 55.72 N
ATOM 17 C5 A B1852 90.861 -21.394 9.010 1.00 55.80 C
ATOM 18 C6 A B1852 91.736 -20.453 9.517 1.00 48.63 C
ATOM 19 N6 A B1852 92.996 -20.731 9.840 1.00 55.07 N
ATOM 20 N1 A B1852 91.264 -19.215 9.674 1.00 48.85 N
ATOM 21 C2 A B1852 90.012 -18.937 9.342 1.00 52.27 C
ATOM 22 N3 A B1852 89.088 -19.741 8.852 1.00 60.25 N
ATOM 23 C4 A B1852 89.588 -20.967 8.711 1.00 55.99 C
ATOM 24 P A B1853 83.359 -23.501 7.967 1.00 51.29 P
ATOM 25 OP1 A B1853 83.001 -23.010 9.323 1.00 46.12 O
ATOM 26 OP2 A B1853 83.269 -24.960 7.690 1.00 53.21 O
ATOM 27 O5' A B1853 82.558 -22.682 6.855 1.00 53.39 O
TER
ATOM 2 P C A1878 90.363 -9.588 10.971 1.00 48.13 P
ATOM 3 OP1 C A1878 91.198 -8.374 11.097 1.00 76.75 O
ATOM 4 OP2 C A1878 89.011 -9.452 10.388 1.00 58.00 O
ATOM 5 O5' C A1878 91.191 -10.747 10.226 1.00 67.74 O
ATOM 6 C5' C A1878 92.175 -10.416 9.233 1.00 88.85 C
ATOM 7 C4' C A1878 92.065 -11.259 8.014 1.00 84.77 C
ATOM 8 O4' C A1878 90.741 -11.573 7.678 1.00 90.02 O
ATOM 9 C3' C A1878 92.861 -12.500 7.928 1.00 82.65 C
ATOM 10 O3' C A1878 93.949 -12.440 8.836 1.00 92.85 O
ATOM 11 C2' C A1878 91.832 -13.548 8.364 1.00 79.68 C
ATOM 12 O2' C A1878 91.731 -13.669 9.763 1.00 80.01 O
ATOM 13 C1' C A1878 90.589 -12.932 7.810 1.00 72.19 C
ATOM 14 N1 C A1878 89.252 -13.373 8.166 1.00 65.65 N
ATOM 15 C2 C A1878 88.805 -14.708 8.210 1.00 64.89 C
ATOM 16 O2 C A1878 89.605 -15.637 8.025 1.00 57.94 O
ATOM 17 N3 C A1878 87.484 -14.942 8.496 1.00 62.62 N
ATOM 18 C4 C A1878 86.628 -13.914 8.694 1.00 60.39 C
ATOM 19 N4 C A1878 85.337 -14.153 8.966 1.00 64.66 N
ATOM 20 C5 C A1878 87.047 -12.563 8.624 1.00 49.93 C
ATOM 21 C6 C A1878 88.329 -12.368 8.345 1.00 60.15 C
ATOM 22 P U A1879 95.401 -11.925 8.332 1.00 66.57 P
ATOM 23 OP1 U A1879 96.413 -12.798 8.967 1.00136.99 O
ATOM 24 OP2 U A1879 95.457 -10.464 8.586 1.00138.44 O
ATOM 25 O5' U A1879 95.386 -12.190 6.779 1.00 68.55 O
TER
ATOM 1 O3' G B1851 83.886 -17.479 6.405 1.00 31.29 O
ATOM 2 P A B1852 84.161 -17.842 7.934 1.00 47.34 P
ATOM 3 OP1 A B1852 82.834 -17.985 8.603 1.00 57.41 O
ATOM 4 OP2 A B1852 85.131 -16.850 8.465 1.00 51.07 O
ATOM 5 O5' A B1852 84.852 -19.249 7.821 1.00 39.66 O
ATOM 6 C5' A B1852 85.607 -19.608 6.682 1.00 35.54 C
ATOM 7 C4' A B1852 85.862 -21.069 6.724 1.00 43.16 C
ATOM 8 O4' A B1852 87.306 -21.319 6.744 1.00 41.19 O
ATOM 9 C3' A B1852 85.308 -21.737 7.988 1.00 48.37 C
ATOM 10 O3' A B1852 84.874 -23.062 7.681 1.00 54.24 O
ATOM 11 C2' A B1852 86.544 -21.807 8.863 1.00 48.69 C
ATOM 12 O2' A B1852 86.470 -22.736 9.924 1.00 54.57 O
ATOM 13 C1' A B1852 87.570 -22.195 7.808 1.00 41.82 C
ATOM 14 N9 A B1852 88.951 -22.061 8.224 1.00 45.14 N
ATOM 15 C8 A B1852 89.851 -23.083 8.277 1.00 51.23 C
ATOM 16 N7 A B1852 91.025 -22.739 8.731 1.00 55.72 N
ATOM 17 C5 A B1852 90.861 -21.394 9.010 1.00 55.80 C
ATOM 18 C6 A B1852 91.736 -20.453 9.517 1.00 48.63 C
ATOM 19 N6 A B1852 92.996 -20.731 9.840 1.00 55.07 N
ATOM 20 N1 A B1852 91.264 -19.215 9.674 1.00 48.85 N
ATOM 21 C2 A B1852 90.012 -18.937 9.342 1.00 52.27 C
ATOM 22 N3 A B1852 89.088 -19.741 8.852 1.00 60.25 N
ATOM 23 C4 A B1852 89.588 -20.967 8.711 1.00 55.99 C
ATOM 24 P A B1853 83.359 -23.501 7.967 1.00 51.29 P
ATOM 25 OP1 A B1853 83.001 -23.010 9.323 1.00 46.12 O
ATOM 26 OP2 A B1853 83.269 -24.960 7.690 1.00 53.21 O
ATOM 27 O5' A B1853 82.558 -22.682 6.855 1.00 53.39 O
TER
Atoms:
C2: (88.805,-14.708,8.210)
OP1: (91.198,-8.374,11.097)
OP2: (89.011,-9.452,10.388)
C4: (86.628,-13.914,8.694)
O5': (91.191,-10.747,10.226)
C3': (92.861,-12.500,7.928)
C1': (90.589,-12.932,7.810)
O4': (90.741,-11.573,7.678)
C5': (92.175,-10.416,9.233)
P: (90.363,-9.588,10.971)
O2: (89.605,-15.637,8.025)
C4': (92.065,-11.259,8.014)
C2': (91.832,-13.548,8.364)
O2': (91.731,-13.669,9.763)
N1: (89.252,-13.373,8.166)
N3: (87.484,-14.942,8.496)
N4: (85.337,-14.153,8.966)
C6: (88.329,-12.368,8.345)
C5: (87.047,-12.563,8.624)
O3': (93.949,-12.440,8.836)
OP1: (91.198,-8.374,11.097)
OP2: (89.011,-9.452,10.388)
C4: (86.628,-13.914,8.694)
O5': (91.191,-10.747,10.226)
C3': (92.861,-12.500,7.928)
C1': (90.589,-12.932,7.810)
O4': (90.741,-11.573,7.678)
C5': (92.175,-10.416,9.233)
P: (90.363,-9.588,10.971)
O2: (89.605,-15.637,8.025)
C4': (92.065,-11.259,8.014)
C2': (91.832,-13.548,8.364)
O2': (91.731,-13.669,9.763)
N1: (89.252,-13.373,8.166)
N3: (87.484,-14.942,8.496)
N4: (85.337,-14.153,8.966)
C6: (88.329,-12.368,8.345)
C5: (87.047,-12.563,8.624)
O3': (93.949,-12.440,8.836)
OP1: (82.834,-17.985,8.603)
OP2: (85.131,-16.850,8.465)
C3': (85.308,-21.737,7.988)
C1': (87.570,-22.195,7.808)
C5': (85.607,-19.608,6.682)
O4': (87.306,-21.319,6.744)
C8: (89.851,-23.083,8.277)
O2': (86.470,-22.736,9.924)
C6: (91.736,-20.453,9.517)
C5: (90.861,-21.394,9.010)
C4: (89.588,-20.967,8.711)
P: (84.161,-17.842,7.934)
C4': (85.862,-21.069,6.724)
C2': (86.544,-21.807,8.863)
C2: (90.012,-18.937,9.342)
N1: (91.264,-19.215,9.674)
N3: (89.088,-19.741,8.852)
N6: (92.996,-20.731,9.840)
N7: (91.025,-22.739,8.731)
N9: (88.951,-22.061,8.224)
O5': (84.852,-19.249,7.821)
O3': (84.874,-23.062,7.681)
OP2: (85.131,-16.850,8.465)
C3': (85.308,-21.737,7.988)
C1': (87.570,-22.195,7.808)
C5': (85.607,-19.608,6.682)
O4': (87.306,-21.319,6.744)
C8: (89.851,-23.083,8.277)
O2': (86.470,-22.736,9.924)
C6: (91.736,-20.453,9.517)
C5: (90.861,-21.394,9.010)
C4: (89.588,-20.967,8.711)
P: (84.161,-17.842,7.934)
C4': (85.862,-21.069,6.724)
C2': (86.544,-21.807,8.863)
C2: (90.012,-18.937,9.342)
N1: (91.264,-19.215,9.674)
N3: (89.088,-19.741,8.852)
N6: (92.996,-20.731,9.840)
N7: (91.025,-22.739,8.731)
N9: (88.951,-22.061,8.224)
O5': (84.852,-19.249,7.821)
O3': (84.874,-23.062,7.681)
Image (generated by PyMOL):