Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1102:A1041
Extra
PDB:
ATOM 1 O3' U A1101 -133.597 -83.229 -68.532 1.00 14.96 O
ATOM 2 P C A1102 -134.533 -84.493 -68.267 1.00 22.35 P
ATOM 3 OP1 C A1102 -134.419 -85.389 -69.464 1.00 22.35 O
ATOM 4 OP2 C A1102 -135.883 -83.960 -67.871 1.00 22.35 O
ATOM 5 O5' C A1102 -133.826 -85.184 -67.023 1.00 22.35 O
ATOM 6 C5' C A1102 -132.442 -85.463 -67.055 1.00 22.35 C
ATOM 7 C4' C A1102 -131.804 -85.140 -65.744 1.00 22.35 C
ATOM 8 O4' C A1102 -132.119 -83.788 -65.363 1.00 22.35 O
ATOM 9 C3' C A1102 -132.271 -85.965 -64.582 1.00 22.35 C
ATOM 10 O3' C A1102 -131.615 -87.205 -64.545 1.00 22.35 O
ATOM 11 C2' C A1102 -131.986 -85.072 -63.369 1.00 22.35 C
ATOM 12 O2' C A1102 -130.669 -85.276 -62.881 1.00 22.35 O
ATOM 13 C1' C A1102 -132.051 -83.667 -63.969 1.00 22.35 C
ATOM 14 N1 C A1102 -133.196 -82.875 -63.493 1.00 22.34 N
ATOM 15 C2 C A1102 -133.147 -82.406 -62.191 1.00 22.34 C
ATOM 16 O2 C A1102 -132.179 -82.751 -61.498 1.00 22.34 O
ATOM 17 N3 C A1102 -134.149 -81.627 -61.720 1.00 22.34 N
ATOM 18 C4 C A1102 -135.164 -81.294 -62.514 1.00 22.34 C
ATOM 19 N4 C A1102 -136.146 -80.532 -62.022 1.00 22.34 N
ATOM 20 C5 C A1102 -135.217 -81.734 -63.859 1.00 22.34 C
ATOM 21 C6 C A1102 -134.217 -82.503 -64.308 1.00 22.34 C
ATOM 22 P G A1103 -132.468 -88.551 -64.542 1.00 17.00 P
ATOM 23 OP1 G A1103 -131.590 -89.643 -65.049 1.00 17.00 O
ATOM 24 OP2 G A1103 -133.745 -88.257 -65.249 1.00 17.00 O
ATOM 25 O5' G A1103 -132.739 -88.759 -63.005 1.00 17.00 O
TER
ATOM 1 O3' G B1040 -138.602 -80.230 -57.901 1.00 7.60 O
ATOM 2 P A B1041 -137.700 -78.982 -58.305 1.00 5.02 P
ATOM 3 OP1 A B1041 -138.599 -78.002 -58.955 1.00 5.02 O
ATOM 4 OP2 A B1041 -136.539 -79.510 -59.076 1.00 5.02 O
ATOM 5 O5' A B1041 -137.223 -78.426 -56.899 1.00 5.02 O
ATOM 6 C5' A B1041 -138.145 -77.854 -56.006 1.00 5.02 C
ATOM 7 C4' A B1041 -137.951 -78.387 -54.621 1.00 5.02 C
ATOM 8 O4' A B1041 -138.133 -79.824 -54.624 1.00 5.02 O
ATOM 9 C3' A B1041 -136.573 -78.187 -54.025 1.00 5.02 C
ATOM 10 O3' A B1041 -136.404 -76.891 -53.469 1.00 5.02 O
ATOM 11 C2' A B1041 -136.509 -79.293 -52.988 1.00 5.02 C
ATOM 12 O2' A B1041 -137.229 -78.908 -51.822 1.00 5.02 O
ATOM 13 C1' A B1041 -137.273 -80.421 -53.688 1.00 5.02 C
ATOM 14 N9 A B1041 -136.385 -81.355 -54.411 1.00 4.99 N
ATOM 15 C8 A B1041 -136.452 -81.593 -55.763 1.00 4.99 C
ATOM 16 N7 A B1041 -135.575 -82.452 -56.220 1.00 4.99 N
ATOM 17 C5 A B1041 -134.878 -82.825 -55.095 1.00 4.99 C
ATOM 18 C6 A B1041 -133.820 -83.730 -54.937 1.00 4.99 C
ATOM 19 N6 A B1041 -133.268 -84.447 -55.936 1.00 4.99 N
ATOM 20 N1 A B1041 -133.360 -83.875 -53.668 1.00 4.99 N
ATOM 21 C2 A B1041 -133.909 -83.177 -52.661 1.00 4.99 C
ATOM 22 N3 A B1041 -134.912 -82.305 -52.716 1.00 4.99 N
ATOM 23 C4 A B1041 -135.368 -82.172 -53.970 1.00 4.99 C
ATOM 24 P C B1042 -135.258 -75.895 -54.026 1.00 12.91 P
ATOM 25 OP1 C B1042 -135.499 -74.568 -53.362 1.00 12.91 O
ATOM 26 OP2 C B1042 -135.267 -75.974 -55.532 1.00 12.91 O
ATOM 27 O5' C B1042 -133.906 -76.539 -53.466 1.00 12.91 O
TER
ATOM 2 P C A1102 -134.533 -84.493 -68.267 1.00 22.35 P
ATOM 3 OP1 C A1102 -134.419 -85.389 -69.464 1.00 22.35 O
ATOM 4 OP2 C A1102 -135.883 -83.960 -67.871 1.00 22.35 O
ATOM 5 O5' C A1102 -133.826 -85.184 -67.023 1.00 22.35 O
ATOM 6 C5' C A1102 -132.442 -85.463 -67.055 1.00 22.35 C
ATOM 7 C4' C A1102 -131.804 -85.140 -65.744 1.00 22.35 C
ATOM 8 O4' C A1102 -132.119 -83.788 -65.363 1.00 22.35 O
ATOM 9 C3' C A1102 -132.271 -85.965 -64.582 1.00 22.35 C
ATOM 10 O3' C A1102 -131.615 -87.205 -64.545 1.00 22.35 O
ATOM 11 C2' C A1102 -131.986 -85.072 -63.369 1.00 22.35 C
ATOM 12 O2' C A1102 -130.669 -85.276 -62.881 1.00 22.35 O
ATOM 13 C1' C A1102 -132.051 -83.667 -63.969 1.00 22.35 C
ATOM 14 N1 C A1102 -133.196 -82.875 -63.493 1.00 22.34 N
ATOM 15 C2 C A1102 -133.147 -82.406 -62.191 1.00 22.34 C
ATOM 16 O2 C A1102 -132.179 -82.751 -61.498 1.00 22.34 O
ATOM 17 N3 C A1102 -134.149 -81.627 -61.720 1.00 22.34 N
ATOM 18 C4 C A1102 -135.164 -81.294 -62.514 1.00 22.34 C
ATOM 19 N4 C A1102 -136.146 -80.532 -62.022 1.00 22.34 N
ATOM 20 C5 C A1102 -135.217 -81.734 -63.859 1.00 22.34 C
ATOM 21 C6 C A1102 -134.217 -82.503 -64.308 1.00 22.34 C
ATOM 22 P G A1103 -132.468 -88.551 -64.542 1.00 17.00 P
ATOM 23 OP1 G A1103 -131.590 -89.643 -65.049 1.00 17.00 O
ATOM 24 OP2 G A1103 -133.745 -88.257 -65.249 1.00 17.00 O
ATOM 25 O5' G A1103 -132.739 -88.759 -63.005 1.00 17.00 O
TER
ATOM 1 O3' G B1040 -138.602 -80.230 -57.901 1.00 7.60 O
ATOM 2 P A B1041 -137.700 -78.982 -58.305 1.00 5.02 P
ATOM 3 OP1 A B1041 -138.599 -78.002 -58.955 1.00 5.02 O
ATOM 4 OP2 A B1041 -136.539 -79.510 -59.076 1.00 5.02 O
ATOM 5 O5' A B1041 -137.223 -78.426 -56.899 1.00 5.02 O
ATOM 6 C5' A B1041 -138.145 -77.854 -56.006 1.00 5.02 C
ATOM 7 C4' A B1041 -137.951 -78.387 -54.621 1.00 5.02 C
ATOM 8 O4' A B1041 -138.133 -79.824 -54.624 1.00 5.02 O
ATOM 9 C3' A B1041 -136.573 -78.187 -54.025 1.00 5.02 C
ATOM 10 O3' A B1041 -136.404 -76.891 -53.469 1.00 5.02 O
ATOM 11 C2' A B1041 -136.509 -79.293 -52.988 1.00 5.02 C
ATOM 12 O2' A B1041 -137.229 -78.908 -51.822 1.00 5.02 O
ATOM 13 C1' A B1041 -137.273 -80.421 -53.688 1.00 5.02 C
ATOM 14 N9 A B1041 -136.385 -81.355 -54.411 1.00 4.99 N
ATOM 15 C8 A B1041 -136.452 -81.593 -55.763 1.00 4.99 C
ATOM 16 N7 A B1041 -135.575 -82.452 -56.220 1.00 4.99 N
ATOM 17 C5 A B1041 -134.878 -82.825 -55.095 1.00 4.99 C
ATOM 18 C6 A B1041 -133.820 -83.730 -54.937 1.00 4.99 C
ATOM 19 N6 A B1041 -133.268 -84.447 -55.936 1.00 4.99 N
ATOM 20 N1 A B1041 -133.360 -83.875 -53.668 1.00 4.99 N
ATOM 21 C2 A B1041 -133.909 -83.177 -52.661 1.00 4.99 C
ATOM 22 N3 A B1041 -134.912 -82.305 -52.716 1.00 4.99 N
ATOM 23 C4 A B1041 -135.368 -82.172 -53.970 1.00 4.99 C
ATOM 24 P C B1042 -135.258 -75.895 -54.026 1.00 12.91 P
ATOM 25 OP1 C B1042 -135.499 -74.568 -53.362 1.00 12.91 O
ATOM 26 OP2 C B1042 -135.267 -75.974 -55.532 1.00 12.91 O
ATOM 27 O5' C B1042 -133.906 -76.539 -53.466 1.00 12.91 O
TER
Atoms:
C2: (-133.147,-82.406,-62.191)
OP1: (-134.419,-85.389,-69.464)
OP2: (-135.883,-83.960,-67.871)
C4: (-135.164,-81.294,-62.514)
O5': (-133.826,-85.184,-67.023)
C3': (-132.271,-85.965,-64.582)
C1': (-132.051,-83.667,-63.969)
O4': (-132.119,-83.788,-65.363)
C5': (-132.442,-85.463,-67.055)
P: (-134.533,-84.493,-68.267)
O2: (-132.179,-82.751,-61.498)
C4': (-131.804,-85.140,-65.744)
C2': (-131.986,-85.072,-63.369)
O2': (-130.669,-85.276,-62.881)
N1: (-133.196,-82.875,-63.493)
N3: (-134.149,-81.627,-61.720)
N4: (-136.146,-80.532,-62.022)
C6: (-134.217,-82.503,-64.308)
C5: (-135.217,-81.734,-63.859)
O3': (-131.615,-87.205,-64.545)
OP1: (-134.419,-85.389,-69.464)
OP2: (-135.883,-83.960,-67.871)
C4: (-135.164,-81.294,-62.514)
O5': (-133.826,-85.184,-67.023)
C3': (-132.271,-85.965,-64.582)
C1': (-132.051,-83.667,-63.969)
O4': (-132.119,-83.788,-65.363)
C5': (-132.442,-85.463,-67.055)
P: (-134.533,-84.493,-68.267)
O2: (-132.179,-82.751,-61.498)
C4': (-131.804,-85.140,-65.744)
C2': (-131.986,-85.072,-63.369)
O2': (-130.669,-85.276,-62.881)
N1: (-133.196,-82.875,-63.493)
N3: (-134.149,-81.627,-61.720)
N4: (-136.146,-80.532,-62.022)
C6: (-134.217,-82.503,-64.308)
C5: (-135.217,-81.734,-63.859)
O3': (-131.615,-87.205,-64.545)
OP1: (-138.599,-78.002,-58.955)
OP2: (-136.539,-79.510,-59.076)
C3': (-136.573,-78.187,-54.025)
C1': (-137.273,-80.421,-53.688)
C5': (-138.145,-77.854,-56.006)
O4': (-138.133,-79.824,-54.624)
C8: (-136.452,-81.593,-55.763)
O2': (-137.229,-78.908,-51.822)
C6: (-133.820,-83.730,-54.937)
C5: (-134.878,-82.825,-55.095)
C4: (-135.368,-82.172,-53.970)
P: (-137.700,-78.982,-58.305)
C4': (-137.951,-78.387,-54.621)
C2': (-136.509,-79.293,-52.988)
C2: (-133.909,-83.177,-52.661)
N1: (-133.360,-83.875,-53.668)
N3: (-134.912,-82.305,-52.716)
N6: (-133.268,-84.447,-55.936)
N7: (-135.575,-82.452,-56.220)
N9: (-136.385,-81.355,-54.411)
O5': (-137.223,-78.426,-56.899)
O3': (-136.404,-76.891,-53.469)
OP2: (-136.539,-79.510,-59.076)
C3': (-136.573,-78.187,-54.025)
C1': (-137.273,-80.421,-53.688)
C5': (-138.145,-77.854,-56.006)
O4': (-138.133,-79.824,-54.624)
C8: (-136.452,-81.593,-55.763)
O2': (-137.229,-78.908,-51.822)
C6: (-133.820,-83.730,-54.937)
C5: (-134.878,-82.825,-55.095)
C4: (-135.368,-82.172,-53.970)
P: (-137.700,-78.982,-58.305)
C4': (-137.951,-78.387,-54.621)
C2': (-136.509,-79.293,-52.988)
C2: (-133.909,-83.177,-52.661)
N1: (-133.360,-83.875,-53.668)
N3: (-134.912,-82.305,-52.716)
N6: (-133.268,-84.447,-55.936)
N7: (-135.575,-82.452,-56.220)
N9: (-136.385,-81.355,-54.411)
O5': (-137.223,-78.426,-56.899)
O3': (-136.404,-76.891,-53.469)
Image (generated by PyMOL):