Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1639:A1267
Extra
PDB:
ATOM 1 O3' G A1638 -24.685 -62.572 -3.255 1.00 0.01 O
ATOM 2 P C A1639 -24.809 -63.748 -2.200 1.00 0.01 P
ATOM 3 OP1 C A1639 -23.465 -63.945 -1.594 1.00 0.01 O
ATOM 4 OP2 C A1639 -25.468 -64.889 -2.902 1.00 0.01 O
ATOM 5 O5' C A1639 -25.803 -63.138 -1.138 1.00 0.01 O
ATOM 6 C5' C A1639 -25.366 -62.834 0.153 1.00 0.01 C
ATOM 7 C4' C A1639 -26.181 -61.733 0.730 1.00 0.01 C
ATOM 8 O4' C A1639 -26.092 -60.583 -0.121 1.00 0.01 O
ATOM 9 C3' C A1639 -27.667 -61.989 0.814 1.00 0.01 C
ATOM 10 O3' C A1639 -28.010 -62.784 1.925 1.00 0.01 O
ATOM 11 C2' C A1639 -28.225 -60.582 0.899 1.00 0.01 C
ATOM 12 O2' C A1639 -28.120 -60.102 2.236 1.00 0.01 O
ATOM 13 C1' C A1639 -27.245 -59.808 0.024 1.00 0.01 C
ATOM 14 N1 C A1639 -27.754 -59.540 -1.275 1.00 0.01 N
ATOM 15 C2 C A1639 -28.609 -58.490 -1.412 1.00 0.01 C
ATOM 16 O2 C A1639 -28.909 -57.921 -0.362 1.00 0.01 O
ATOM 17 N3 C A1639 -29.091 -58.142 -2.621 1.00 0.01 N
ATOM 18 C4 C A1639 -28.672 -58.848 -3.658 1.00 0.01 C
ATOM 19 N4 C A1639 -29.126 -58.557 -4.872 1.00 0.01 N
ATOM 20 C5 C A1639 -27.748 -59.910 -3.521 1.00 0.01 C
ATOM 21 C6 C A1639 -27.298 -60.221 -2.309 1.00 0.01 C
ATOM 22 P U A1640 -28.693 -64.199 1.718 1.00 0.01 P
ATOM 23 OP1 U A1640 -29.384 -64.161 0.436 1.00 0.01 O
ATOM 24 OP2 U A1640 -29.465 -64.471 2.911 1.00 0.01 O
ATOM 25 O5' U A1640 -27.457 -65.175 1.663 1.00 0.01 O
TER
ATOM 1 O3' U B1266 -30.755 -57.301 -7.827 1.00 0.01 O
ATOM 2 P A B1267 -30.744 -55.864 -7.122 1.00 0.01 P
ATOM 3 OP1 A B1267 -31.049 -56.058 -5.716 1.00 0.01 O
ATOM 4 OP2 A B1267 -31.607 -54.989 -7.921 1.00 0.01 O
ATOM 5 O5' A B1267 -29.238 -55.420 -7.275 1.00 0.01 O
ATOM 6 C5' A B1267 -28.647 -55.317 -8.549 1.00 0.01 C
ATOM 7 C4' A B1267 -27.252 -55.852 -8.546 1.00 0.01 C
ATOM 8 O4' A B1267 -26.473 -55.179 -7.532 1.00 0.01 O
ATOM 9 C3' A B1267 -27.119 -57.313 -8.194 1.00 0.01 C
ATOM 10 O3' A B1267 -27.418 -58.169 -9.292 1.00 0.01 O
ATOM 11 C2' A B1267 -25.679 -57.410 -7.678 1.00 0.01 C
ATOM 12 O2' A B1267 -24.754 -57.569 -8.737 1.00 0.01 O
ATOM 13 C1' A B1267 -25.466 -56.031 -7.058 1.00 0.01 C
ATOM 14 N9 A B1267 -25.550 -56.058 -5.604 1.00 0.01 N
ATOM 15 C8 A B1267 -26.692 -55.870 -4.911 1.00 0.01 C
ATOM 16 N7 A B1267 -26.526 -55.921 -3.620 1.00 0.01 N
ATOM 17 C5 A B1267 -25.183 -56.132 -3.473 1.00 0.01 C
ATOM 18 C6 A B1267 -24.420 -56.262 -2.350 1.00 0.01 C
ATOM 19 N6 A B1267 -24.931 -56.209 -1.127 1.00 0.01 N
ATOM 20 N1 A B1267 -23.123 -56.470 -2.523 1.00 0.01 N
ATOM 21 C2 A B1267 -22.639 -56.544 -3.741 1.00 0.01 C
ATOM 22 N3 A B1267 -23.265 -56.429 -4.880 1.00 0.01 N
ATOM 23 C4 A B1267 -24.560 -56.223 -4.676 1.00 0.01 C
ATOM 24 P A B1268 -28.000 -59.641 -9.043 1.00 0.01 P
ATOM 25 OP1 A B1268 -29.202 -59.800 -9.877 1.00 0.01 O
ATOM 26 OP2 A B1268 -28.125 -59.808 -7.600 1.00 0.01 O
ATOM 27 O5' A B1268 -26.828 -60.550 -9.590 1.00 0.01 O
TER
ATOM 2 P C A1639 -24.809 -63.748 -2.200 1.00 0.01 P
ATOM 3 OP1 C A1639 -23.465 -63.945 -1.594 1.00 0.01 O
ATOM 4 OP2 C A1639 -25.468 -64.889 -2.902 1.00 0.01 O
ATOM 5 O5' C A1639 -25.803 -63.138 -1.138 1.00 0.01 O
ATOM 6 C5' C A1639 -25.366 -62.834 0.153 1.00 0.01 C
ATOM 7 C4' C A1639 -26.181 -61.733 0.730 1.00 0.01 C
ATOM 8 O4' C A1639 -26.092 -60.583 -0.121 1.00 0.01 O
ATOM 9 C3' C A1639 -27.667 -61.989 0.814 1.00 0.01 C
ATOM 10 O3' C A1639 -28.010 -62.784 1.925 1.00 0.01 O
ATOM 11 C2' C A1639 -28.225 -60.582 0.899 1.00 0.01 C
ATOM 12 O2' C A1639 -28.120 -60.102 2.236 1.00 0.01 O
ATOM 13 C1' C A1639 -27.245 -59.808 0.024 1.00 0.01 C
ATOM 14 N1 C A1639 -27.754 -59.540 -1.275 1.00 0.01 N
ATOM 15 C2 C A1639 -28.609 -58.490 -1.412 1.00 0.01 C
ATOM 16 O2 C A1639 -28.909 -57.921 -0.362 1.00 0.01 O
ATOM 17 N3 C A1639 -29.091 -58.142 -2.621 1.00 0.01 N
ATOM 18 C4 C A1639 -28.672 -58.848 -3.658 1.00 0.01 C
ATOM 19 N4 C A1639 -29.126 -58.557 -4.872 1.00 0.01 N
ATOM 20 C5 C A1639 -27.748 -59.910 -3.521 1.00 0.01 C
ATOM 21 C6 C A1639 -27.298 -60.221 -2.309 1.00 0.01 C
ATOM 22 P U A1640 -28.693 -64.199 1.718 1.00 0.01 P
ATOM 23 OP1 U A1640 -29.384 -64.161 0.436 1.00 0.01 O
ATOM 24 OP2 U A1640 -29.465 -64.471 2.911 1.00 0.01 O
ATOM 25 O5' U A1640 -27.457 -65.175 1.663 1.00 0.01 O
TER
ATOM 1 O3' U B1266 -30.755 -57.301 -7.827 1.00 0.01 O
ATOM 2 P A B1267 -30.744 -55.864 -7.122 1.00 0.01 P
ATOM 3 OP1 A B1267 -31.049 -56.058 -5.716 1.00 0.01 O
ATOM 4 OP2 A B1267 -31.607 -54.989 -7.921 1.00 0.01 O
ATOM 5 O5' A B1267 -29.238 -55.420 -7.275 1.00 0.01 O
ATOM 6 C5' A B1267 -28.647 -55.317 -8.549 1.00 0.01 C
ATOM 7 C4' A B1267 -27.252 -55.852 -8.546 1.00 0.01 C
ATOM 8 O4' A B1267 -26.473 -55.179 -7.532 1.00 0.01 O
ATOM 9 C3' A B1267 -27.119 -57.313 -8.194 1.00 0.01 C
ATOM 10 O3' A B1267 -27.418 -58.169 -9.292 1.00 0.01 O
ATOM 11 C2' A B1267 -25.679 -57.410 -7.678 1.00 0.01 C
ATOM 12 O2' A B1267 -24.754 -57.569 -8.737 1.00 0.01 O
ATOM 13 C1' A B1267 -25.466 -56.031 -7.058 1.00 0.01 C
ATOM 14 N9 A B1267 -25.550 -56.058 -5.604 1.00 0.01 N
ATOM 15 C8 A B1267 -26.692 -55.870 -4.911 1.00 0.01 C
ATOM 16 N7 A B1267 -26.526 -55.921 -3.620 1.00 0.01 N
ATOM 17 C5 A B1267 -25.183 -56.132 -3.473 1.00 0.01 C
ATOM 18 C6 A B1267 -24.420 -56.262 -2.350 1.00 0.01 C
ATOM 19 N6 A B1267 -24.931 -56.209 -1.127 1.00 0.01 N
ATOM 20 N1 A B1267 -23.123 -56.470 -2.523 1.00 0.01 N
ATOM 21 C2 A B1267 -22.639 -56.544 -3.741 1.00 0.01 C
ATOM 22 N3 A B1267 -23.265 -56.429 -4.880 1.00 0.01 N
ATOM 23 C4 A B1267 -24.560 -56.223 -4.676 1.00 0.01 C
ATOM 24 P A B1268 -28.000 -59.641 -9.043 1.00 0.01 P
ATOM 25 OP1 A B1268 -29.202 -59.800 -9.877 1.00 0.01 O
ATOM 26 OP2 A B1268 -28.125 -59.808 -7.600 1.00 0.01 O
ATOM 27 O5' A B1268 -26.828 -60.550 -9.590 1.00 0.01 O
TER
Atoms:
C2: (-28.609,-58.490,-1.412)
OP1: (-23.465,-63.945,-1.594)
OP2: (-25.468,-64.889,-2.902)
C4: (-28.672,-58.848,-3.658)
O5': (-25.803,-63.138,-1.138)
C3': (-27.667,-61.989,0.814)
C1': (-27.245,-59.808,0.024)
O4': (-26.092,-60.583,-0.121)
C5': (-25.366,-62.834,0.153)
P: (-24.809,-63.748,-2.200)
O2: (-28.909,-57.921,-0.362)
C4': (-26.181,-61.733,0.730)
C2': (-28.225,-60.582,0.899)
O2': (-28.120,-60.102,2.236)
N1: (-27.754,-59.540,-1.275)
N3: (-29.091,-58.142,-2.621)
N4: (-29.126,-58.557,-4.872)
C6: (-27.298,-60.221,-2.309)
C5: (-27.748,-59.910,-3.521)
O3': (-28.010,-62.784,1.925)
OP1: (-23.465,-63.945,-1.594)
OP2: (-25.468,-64.889,-2.902)
C4: (-28.672,-58.848,-3.658)
O5': (-25.803,-63.138,-1.138)
C3': (-27.667,-61.989,0.814)
C1': (-27.245,-59.808,0.024)
O4': (-26.092,-60.583,-0.121)
C5': (-25.366,-62.834,0.153)
P: (-24.809,-63.748,-2.200)
O2: (-28.909,-57.921,-0.362)
C4': (-26.181,-61.733,0.730)
C2': (-28.225,-60.582,0.899)
O2': (-28.120,-60.102,2.236)
N1: (-27.754,-59.540,-1.275)
N3: (-29.091,-58.142,-2.621)
N4: (-29.126,-58.557,-4.872)
C6: (-27.298,-60.221,-2.309)
C5: (-27.748,-59.910,-3.521)
O3': (-28.010,-62.784,1.925)
OP1: (-31.049,-56.058,-5.716)
OP2: (-31.607,-54.989,-7.921)
C3': (-27.119,-57.313,-8.194)
C1': (-25.466,-56.031,-7.058)
C5': (-28.647,-55.317,-8.549)
O4': (-26.473,-55.179,-7.532)
C8: (-26.692,-55.870,-4.911)
O2': (-24.754,-57.569,-8.737)
C6: (-24.420,-56.262,-2.350)
C5: (-25.183,-56.132,-3.473)
C4: (-24.560,-56.223,-4.676)
P: (-30.744,-55.864,-7.122)
C4': (-27.252,-55.852,-8.546)
C2': (-25.679,-57.410,-7.678)
C2: (-22.639,-56.544,-3.741)
N1: (-23.123,-56.470,-2.523)
N3: (-23.265,-56.429,-4.880)
N6: (-24.931,-56.209,-1.127)
N7: (-26.526,-55.921,-3.620)
N9: (-25.550,-56.058,-5.604)
O5': (-29.238,-55.420,-7.275)
O3': (-27.418,-58.169,-9.292)
OP2: (-31.607,-54.989,-7.921)
C3': (-27.119,-57.313,-8.194)
C1': (-25.466,-56.031,-7.058)
C5': (-28.647,-55.317,-8.549)
O4': (-26.473,-55.179,-7.532)
C8: (-26.692,-55.870,-4.911)
O2': (-24.754,-57.569,-8.737)
C6: (-24.420,-56.262,-2.350)
C5: (-25.183,-56.132,-3.473)
C4: (-24.560,-56.223,-4.676)
P: (-30.744,-55.864,-7.122)
C4': (-27.252,-55.852,-8.546)
C2': (-25.679,-57.410,-7.678)
C2: (-22.639,-56.544,-3.741)
N1: (-23.123,-56.470,-2.523)
N3: (-23.265,-56.429,-4.880)
N6: (-24.931,-56.209,-1.127)
N7: (-26.526,-55.921,-3.620)
N9: (-25.550,-56.058,-5.604)
O5': (-29.238,-55.420,-7.275)
O3': (-27.418,-58.169,-9.292)
Image (generated by PyMOL):