Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1639:A1267
Extra
PDB:
ATOM 1 O3' G A1638 1.752 111.900 180.383 1.00 9.97 O
ATOM 2 P C A1639 1.401 112.496 181.828 1.00 1.40 P
ATOM 3 OP1 C A1639 2.696 112.686 182.562 1.00 1.40 O
ATOM 4 OP2 C A1639 0.352 111.604 182.404 1.00 1.40 O
ATOM 5 O5' C A1639 0.797 113.904 181.482 1.00 1.40 O
ATOM 6 C5' C A1639 1.618 114.873 180.889 1.00 1.40 C
ATOM 7 C4' C A1639 1.127 115.244 179.524 1.00 1.40 C
ATOM 8 O4' C A1639 1.271 114.145 178.615 1.00 1.40 O
ATOM 9 C3' C A1639 -0.334 115.576 179.409 1.00 1.40 C
ATOM 10 O3' C A1639 -0.638 116.836 179.939 1.00 1.40 O
ATOM 11 C2' C A1639 -0.574 115.460 177.908 1.00 1.40 C
ATOM 12 O2' C A1639 -0.176 116.641 177.237 1.00 1.40 O
ATOM 13 C1' C A1639 0.402 114.359 177.527 1.00 1.40 C
ATOM 14 N1 C A1639 -0.258 113.110 177.148 1.00 1.35 N
ATOM 15 C2 C A1639 -0.736 113.211 175.869 1.00 1.35 C
ATOM 16 O2 C A1639 -0.600 114.327 175.311 1.00 1.35 O
ATOM 17 N3 C A1639 -1.323 112.134 175.298 1.00 1.35 N
ATOM 18 C4 C A1639 -1.437 110.983 175.970 1.00 1.35 C
ATOM 19 N4 C A1639 -2.058 109.957 175.343 1.00 1.35 N
ATOM 20 C5 C A1639 -0.924 110.874 177.295 1.00 1.35 C
ATOM 21 C6 C A1639 -0.332 111.950 177.831 1.00 1.35 C
ATOM 22 P U A1640 -1.602 116.938 181.191 1.00 10.26 P
ATOM 23 OP1 U A1640 -2.281 115.644 181.324 1.00 10.26 O
ATOM 24 OP2 U A1640 -2.408 118.129 180.995 1.00 10.26 O
ATOM 25 O5' U A1640 -0.610 117.139 182.411 1.00 10.26 O
TER
ATOM 1 O3' U B1266 -3.760 107.334 174.620 1.00 8.05 O
ATOM 2 P A B1267 -3.433 107.728 173.114 1.00 0.01 P
ATOM 3 OP1 A B1267 -3.505 109.219 173.036 1.00 0.01 O
ATOM 4 OP2 A B1267 -4.331 106.901 172.266 1.00 0.01 O
ATOM 5 O5' A B1267 -1.931 107.271 172.921 1.00 0.01 O
ATOM 6 C5' A B1267 -1.571 105.919 173.045 1.00 0.01 C
ATOM 7 C4' A B1267 -0.326 105.771 173.858 1.00 0.01 C
ATOM 8 O4' A B1267 0.734 106.572 173.294 1.00 0.01 O
ATOM 9 C3' A B1267 -0.415 106.243 175.280 1.00 0.01 C
ATOM 10 O3' A B1267 -1.076 105.295 176.087 1.00 0.01 O
ATOM 11 C2' A B1267 1.045 106.426 175.629 1.00 0.01 C
ATOM 12 O2' A B1267 1.642 105.162 175.867 1.00 0.01 O
ATOM 13 C1' A B1267 1.610 106.970 174.315 1.00 0.01 C
ATOM 14 N9 A B1267 1.711 108.435 174.282 1.00 0.01 N
ATOM 15 C8 A B1267 0.769 109.272 173.728 1.00 0.01 C
ATOM 16 N7 A B1267 1.081 110.549 173.775 1.00 0.01 N
ATOM 17 C5 A B1267 2.333 110.546 174.377 1.00 0.01 C
ATOM 18 C6 A B1267 3.189 111.605 174.722 1.00 0.01 C
ATOM 19 N6 A B1267 2.883 112.885 174.479 1.00 0.01 N
ATOM 20 N1 A B1267 4.359 111.295 175.309 1.00 0.01 N
ATOM 21 C2 A B1267 4.597 110.004 175.526 1.00 0.01 C
ATOM 22 N3 A B1267 3.868 108.917 175.255 1.00 0.01 N
ATOM 23 C4 A B1267 2.734 109.254 174.668 1.00 0.01 C
ATOM 24 P A B1268 -1.958 105.740 177.358 1.00 8.86 P
ATOM 25 OP1 A B1268 -3.174 104.884 177.367 1.00 8.86 O
ATOM 26 OP2 A B1268 -2.121 107.236 177.291 1.00 8.86 O
ATOM 27 O5' A B1268 -1.007 105.333 178.575 1.00 8.86 O
TER
ATOM 2 P C A1639 1.401 112.496 181.828 1.00 1.40 P
ATOM 3 OP1 C A1639 2.696 112.686 182.562 1.00 1.40 O
ATOM 4 OP2 C A1639 0.352 111.604 182.404 1.00 1.40 O
ATOM 5 O5' C A1639 0.797 113.904 181.482 1.00 1.40 O
ATOM 6 C5' C A1639 1.618 114.873 180.889 1.00 1.40 C
ATOM 7 C4' C A1639 1.127 115.244 179.524 1.00 1.40 C
ATOM 8 O4' C A1639 1.271 114.145 178.615 1.00 1.40 O
ATOM 9 C3' C A1639 -0.334 115.576 179.409 1.00 1.40 C
ATOM 10 O3' C A1639 -0.638 116.836 179.939 1.00 1.40 O
ATOM 11 C2' C A1639 -0.574 115.460 177.908 1.00 1.40 C
ATOM 12 O2' C A1639 -0.176 116.641 177.237 1.00 1.40 O
ATOM 13 C1' C A1639 0.402 114.359 177.527 1.00 1.40 C
ATOM 14 N1 C A1639 -0.258 113.110 177.148 1.00 1.35 N
ATOM 15 C2 C A1639 -0.736 113.211 175.869 1.00 1.35 C
ATOM 16 O2 C A1639 -0.600 114.327 175.311 1.00 1.35 O
ATOM 17 N3 C A1639 -1.323 112.134 175.298 1.00 1.35 N
ATOM 18 C4 C A1639 -1.437 110.983 175.970 1.00 1.35 C
ATOM 19 N4 C A1639 -2.058 109.957 175.343 1.00 1.35 N
ATOM 20 C5 C A1639 -0.924 110.874 177.295 1.00 1.35 C
ATOM 21 C6 C A1639 -0.332 111.950 177.831 1.00 1.35 C
ATOM 22 P U A1640 -1.602 116.938 181.191 1.00 10.26 P
ATOM 23 OP1 U A1640 -2.281 115.644 181.324 1.00 10.26 O
ATOM 24 OP2 U A1640 -2.408 118.129 180.995 1.00 10.26 O
ATOM 25 O5' U A1640 -0.610 117.139 182.411 1.00 10.26 O
TER
ATOM 1 O3' U B1266 -3.760 107.334 174.620 1.00 8.05 O
ATOM 2 P A B1267 -3.433 107.728 173.114 1.00 0.01 P
ATOM 3 OP1 A B1267 -3.505 109.219 173.036 1.00 0.01 O
ATOM 4 OP2 A B1267 -4.331 106.901 172.266 1.00 0.01 O
ATOM 5 O5' A B1267 -1.931 107.271 172.921 1.00 0.01 O
ATOM 6 C5' A B1267 -1.571 105.919 173.045 1.00 0.01 C
ATOM 7 C4' A B1267 -0.326 105.771 173.858 1.00 0.01 C
ATOM 8 O4' A B1267 0.734 106.572 173.294 1.00 0.01 O
ATOM 9 C3' A B1267 -0.415 106.243 175.280 1.00 0.01 C
ATOM 10 O3' A B1267 -1.076 105.295 176.087 1.00 0.01 O
ATOM 11 C2' A B1267 1.045 106.426 175.629 1.00 0.01 C
ATOM 12 O2' A B1267 1.642 105.162 175.867 1.00 0.01 O
ATOM 13 C1' A B1267 1.610 106.970 174.315 1.00 0.01 C
ATOM 14 N9 A B1267 1.711 108.435 174.282 1.00 0.01 N
ATOM 15 C8 A B1267 0.769 109.272 173.728 1.00 0.01 C
ATOM 16 N7 A B1267 1.081 110.549 173.775 1.00 0.01 N
ATOM 17 C5 A B1267 2.333 110.546 174.377 1.00 0.01 C
ATOM 18 C6 A B1267 3.189 111.605 174.722 1.00 0.01 C
ATOM 19 N6 A B1267 2.883 112.885 174.479 1.00 0.01 N
ATOM 20 N1 A B1267 4.359 111.295 175.309 1.00 0.01 N
ATOM 21 C2 A B1267 4.597 110.004 175.526 1.00 0.01 C
ATOM 22 N3 A B1267 3.868 108.917 175.255 1.00 0.01 N
ATOM 23 C4 A B1267 2.734 109.254 174.668 1.00 0.01 C
ATOM 24 P A B1268 -1.958 105.740 177.358 1.00 8.86 P
ATOM 25 OP1 A B1268 -3.174 104.884 177.367 1.00 8.86 O
ATOM 26 OP2 A B1268 -2.121 107.236 177.291 1.00 8.86 O
ATOM 27 O5' A B1268 -1.007 105.333 178.575 1.00 8.86 O
TER
Atoms:
C2: (-0.736,113.211,175.869)
OP1: (2.696,112.686,182.562)
OP2: (0.352,111.604,182.404)
C4: (-1.437,110.983,175.970)
O5': (0.797,113.904,181.482)
C3': (-0.334,115.576,179.409)
C1': (0.402,114.359,177.527)
O4': (1.271,114.145,178.615)
C5': (1.618,114.873,180.889)
P: (1.401,112.496,181.828)
O2: (-0.600,114.327,175.311)
C4': (1.127,115.244,179.524)
C2': (-0.574,115.460,177.908)
O2': (-0.176,116.641,177.237)
N1: (-0.258,113.110,177.148)
N3: (-1.323,112.134,175.298)
N4: (-2.058,109.957,175.343)
C6: (-0.332,111.950,177.831)
C5: (-0.924,110.874,177.295)
O3': (-0.638,116.836,179.939)
OP1: (2.696,112.686,182.562)
OP2: (0.352,111.604,182.404)
C4: (-1.437,110.983,175.970)
O5': (0.797,113.904,181.482)
C3': (-0.334,115.576,179.409)
C1': (0.402,114.359,177.527)
O4': (1.271,114.145,178.615)
C5': (1.618,114.873,180.889)
P: (1.401,112.496,181.828)
O2: (-0.600,114.327,175.311)
C4': (1.127,115.244,179.524)
C2': (-0.574,115.460,177.908)
O2': (-0.176,116.641,177.237)
N1: (-0.258,113.110,177.148)
N3: (-1.323,112.134,175.298)
N4: (-2.058,109.957,175.343)
C6: (-0.332,111.950,177.831)
C5: (-0.924,110.874,177.295)
O3': (-0.638,116.836,179.939)
OP1: (-3.505,109.219,173.036)
OP2: (-4.331,106.901,172.266)
C3': (-0.415,106.243,175.280)
C1': (1.610,106.970,174.315)
C5': (-1.571,105.919,173.045)
O4': (0.734,106.572,173.294)
C8: (0.769,109.272,173.728)
O2': (1.642,105.162,175.867)
C6: (3.189,111.605,174.722)
C5: (2.333,110.546,174.377)
C4: (2.734,109.254,174.668)
P: (-3.433,107.728,173.114)
C4': (-0.326,105.771,173.858)
C2': (1.045,106.426,175.629)
C2: (4.597,110.004,175.526)
N1: (4.359,111.295,175.309)
N3: (3.868,108.917,175.255)
N6: (2.883,112.885,174.479)
N7: (1.081,110.549,173.775)
N9: (1.711,108.435,174.282)
O5': (-1.931,107.271,172.921)
O3': (-1.076,105.295,176.087)
OP2: (-4.331,106.901,172.266)
C3': (-0.415,106.243,175.280)
C1': (1.610,106.970,174.315)
C5': (-1.571,105.919,173.045)
O4': (0.734,106.572,173.294)
C8: (0.769,109.272,173.728)
O2': (1.642,105.162,175.867)
C6: (3.189,111.605,174.722)
C5: (2.333,110.546,174.377)
C4: (2.734,109.254,174.668)
P: (-3.433,107.728,173.114)
C4': (-0.326,105.771,173.858)
C2': (1.045,106.426,175.629)
C2: (4.597,110.004,175.526)
N1: (4.359,111.295,175.309)
N3: (3.868,108.917,175.255)
N6: (2.883,112.885,174.479)
N7: (1.081,110.549,173.775)
N9: (1.711,108.435,174.282)
O5': (-1.931,107.271,172.921)
O3': (-1.076,105.295,176.087)
Image (generated by PyMOL):