ClaRNA

Doublet info:

Details

Nucleotide types: CC
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ9:02619:02629

Extra

PDB:
ATOM 1 O3' G A2618 49.812 111.554 165.469 1.00 39.86 O
ATOM 2 P C A2619 48.739 110.503 166.024 1.00 41.48 P
ATOM 3 OP1 C A2619 49.110 110.252 167.446 1.00 40.85 O
ATOM 4 OP2 C A2619 48.627 109.352 165.083 1.00 38.97 O
ATOM 5 O5' C A2619 47.374 111.325 165.970 1.00 39.58 O
ATOM 6 C5' C A2619 47.170 112.467 166.818 1.00 39.59 C
ATOM 7 C4' C A2619 45.724 112.892 166.771 1.00 41.32 C
ATOM 8 O4' C A2619 45.414 113.386 165.441 1.00 41.95 O
ATOM 9 C3' C A2619 44.707 111.781 166.989 1.00 42.03 C
ATOM 10 O3' C A2619 44.501 111.510 168.368 1.00 43.30 O
ATOM 11 C2' C A2619 43.465 112.364 166.334 1.00 43.05 C
ATOM 12 O2' C A2619 42.854 113.351 167.143 1.00 42.86 O
ATOM 13 C1' C A2619 44.075 113.053 165.112 1.00 42.14 C
ATOM 14 N1 C A2619 44.073 112.210 163.901 1.00 42.29 N
ATOM 15 C2 C A2619 42.892 112.117 163.144 1.00 43.13 C
ATOM 16 O2 C A2619 41.877 112.729 163.525 1.00 44.27 O
ATOM 17 N3 C A2619 42.884 111.363 162.019 1.00 42.63 N
ATOM 18 C4 C A2619 43.986 110.714 161.642 1.00 42.01 C
ATOM 19 N4 C A2619 43.927 109.988 160.524 1.00 41.99 N
ATOM 20 C5 C A2619 45.196 110.779 162.395 1.00 43.03 C
ATOM 21 C6 C A2619 45.195 111.532 163.509 1.00 43.12 C
ATOM 22 P U A2620 44.126 110.018 168.843 1.00 43.30 P
ATOM 23 OP1 U A2620 44.069 110.022 170.332 1.00 44.37 O
ATOM 24 OP2 U A2620 45.033 109.067 168.153 1.00 44.12 O
ATOM 25 O5' U A2620 42.653 109.793 168.273 1.00 43.58 O
TER

ATOM 1 O3' U B2628 48.646 104.077 162.015 1.00 41.89 O
ATOM 2 P C B2629 48.923 105.419 162.853 1.00 43.97 P
ATOM 3 OP1 C B2629 50.392 105.630 162.870 1.00 43.50 O
ATOM 4 OP2 C B2629 48.182 105.323 164.141 1.00 46.98 O
ATOM 5 O5' C B2629 48.271 106.588 161.981 1.00 43.83 O
ATOM 6 C5' C B2629 46.876 106.944 162.129 1.00 44.80 C
ATOM 7 C4' C B2629 46.365 107.572 160.854 1.00 45.38 C
ATOM 8 O4' C B2629 47.026 108.841 160.640 1.00 46.39 O
ATOM 9 C3' C B2629 46.640 106.747 159.606 1.00 44.83 C
ATOM 10 O3' C B2629 45.553 105.833 159.413 1.00 42.77 O
ATOM 11 C2' C B2629 46.748 107.803 158.513 1.00 45.43 C
ATOM 12 O2' C B2629 45.486 108.219 158.046 1.00 46.48 O
ATOM 13 C1' C B2629 47.372 108.977 159.274 1.00 47.00 C
ATOM 14 N1 C B2629 48.840 109.140 159.185 1.00 50.33 N
ATOM 15 C2 C B2629 49.414 109.640 157.995 1.00 51.43 C
ATOM 16 O2 C B2629 48.687 109.854 157.009 1.00 54.03 O
ATOM 17 N3 C B2629 50.749 109.870 157.953 1.00 50.66 N
ATOM 18 C4 C B2629 51.508 109.612 159.022 1.00 49.28 C
ATOM 19 N4 C B2629 52.812 109.895 158.948 1.00 46.92 N
ATOM 20 C5 C B2629 50.961 109.062 160.220 1.00 49.67 C
ATOM 21 C6 C B2629 49.639 108.842 160.257 1.00 49.92 C
ATOM 22 P U B2630 45.768 104.478 158.575 1.00 42.62 P
ATOM 23 OP1 U B2630 44.933 103.408 159.189 1.00 40.53 O
ATOM 24 OP2 U B2630 47.230 104.255 158.420 1.00 42.63 O
ATOM 25 O5' U B2630 45.140 104.850 157.154 1.00 42.55 O
TER

Atoms:
C2: (42.892,112.117,163.144)
OP1: (49.110,110.252,167.446)
OP2: (48.627,109.352,165.083)
C4: (43.986,110.714,161.642)
O5': (47.374,111.325,165.970)
C3': (44.707,111.781,166.989)
C1': (44.075,113.053,165.112)
O4': (45.414,113.386,165.441)
C5': (47.170,112.467,166.818)
P: (48.739,110.503,166.024)
O2: (41.877,112.729,163.525)
C4': (45.724,112.892,166.771)
C2': (43.465,112.364,166.334)
O2': (42.854,113.351,167.143)
N1: (44.073,112.210,163.901)
N3: (42.884,111.363,162.019)
N4: (43.927,109.988,160.524)
C6: (45.195,111.532,163.509)
C5: (45.196,110.779,162.395)
O3': (44.501,111.510,168.368)
C2: (49.414,109.640,157.995)
OP1: (50.392,105.630,162.870)
OP2: (48.182,105.323,164.141)
C4: (51.508,109.612,159.022)
O5': (48.271,106.588,161.981)
C3': (46.640,106.747,159.606)
C1': (47.372,108.977,159.274)
O4': (47.026,108.841,160.640)
C5': (46.876,106.944,162.129)
P: (48.923,105.419,162.853)
O2: (48.687,109.854,157.009)
C4': (46.365,107.572,160.854)
C2': (46.748,107.803,158.513)
O2': (45.486,108.219,158.046)
N1: (48.840,109.140,159.185)
N3: (50.749,109.870,157.953)
N4: (52.812,109.895,158.948)
C6: (49.639,108.842,160.257)
C5: (50.961,109.062,160.220)
O3': (45.553,105.833,159.413)
Image (generated by PyMOL):
PyMOL image
show in jmol