Doublet info:
Details
Nucleotide types:
CC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02619:02629
Extra
PDB:
ATOM 1 O3' G A2618 49.515 112.742 165.278 1.00 48.93 O
ATOM 2 P C A2619 48.520 111.632 165.880 1.00 50.13 P
ATOM 3 OP1 C A2619 48.992 111.394 167.272 1.00 49.69 O
ATOM 4 OP2 C A2619 48.391 110.477 164.944 1.00 49.56 O
ATOM 5 O5' C A2619 47.114 112.376 165.916 1.00 44.88 O
ATOM 6 C5' C A2619 46.927 113.556 166.710 1.00 44.91 C
ATOM 7 C4' C A2619 45.497 114.027 166.606 1.00 46.35 C
ATOM 8 O4' C A2619 45.233 114.503 165.259 1.00 46.01 O
ATOM 9 C3' C A2619 44.439 112.957 166.824 1.00 45.66 C
ATOM 10 O3' C A2619 44.205 112.718 168.200 1.00 47.28 O
ATOM 11 C2' C A2619 43.232 113.567 166.136 1.00 46.41 C
ATOM 12 O2' C A2619 42.622 114.567 166.926 1.00 47.33 O
ATOM 13 C1' C A2619 43.886 114.227 164.919 1.00 45.04 C
ATOM 14 N1 C A2619 43.861 113.391 163.703 1.00 44.17 N
ATOM 15 C2 C A2619 42.661 113.282 162.993 1.00 44.14 C
ATOM 16 O2 C A2619 41.657 113.867 163.421 1.00 43.91 O
ATOM 17 N3 C A2619 42.625 112.543 161.860 1.00 44.92 N
ATOM 18 C4 C A2619 43.726 111.926 161.430 1.00 45.00 C
ATOM 19 N4 C A2619 43.647 111.219 160.293 1.00 43.35 N
ATOM 20 C5 C A2619 44.959 112.005 162.142 1.00 44.59 C
ATOM 21 C6 C A2619 44.981 112.740 163.263 1.00 45.35 C
ATOM 22 P U A2620 43.948 111.218 168.713 1.00 49.12 P
ATOM 23 OP1 U A2620 43.928 111.245 170.203 1.00 51.90 O
ATOM 24 OP2 U A2620 44.902 110.319 168.013 1.00 48.24 O
ATOM 25 O5' U A2620 42.474 110.897 168.214 1.00 46.63 O
TER
ATOM 1 O3' U B2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 2 P C B2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 3 OP1 C B2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 4 OP2 C B2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 5 O5' C B2629 47.918 107.667 161.902 1.00 47.07 O
ATOM 6 C5' C B2629 46.508 107.934 162.002 1.00 46.07 C
ATOM 7 C4' C B2629 46.012 108.577 160.730 1.00 46.45 C
ATOM 8 O4' C B2629 46.693 109.839 160.533 1.00 46.78 O
ATOM 9 C3' C B2629 46.280 107.777 159.466 1.00 46.43 C
ATOM 10 O3' C B2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 11 C2' C B2629 46.348 108.859 158.395 1.00 46.86 C
ATOM 12 O2' C B2629 45.070 109.283 157.984 1.00 50.21 O
ATOM 13 C1' C B2629 46.987 110.018 159.163 1.00 46.29 C
ATOM 14 N1 C B2629 48.448 110.198 159.022 1.00 47.95 N
ATOM 15 C2 C B2629 48.965 110.686 157.807 1.00 48.99 C
ATOM 16 O2 C B2629 48.194 110.863 156.845 1.00 51.06 O
ATOM 17 N3 C B2629 50.291 110.947 157.713 1.00 48.75 N
ATOM 18 C4 C B2629 51.093 110.728 158.760 1.00 48.63 C
ATOM 19 N4 C B2629 52.390 111.049 158.636 1.00 46.19 N
ATOM 20 C5 C B2629 50.603 110.183 159.983 1.00 48.18 C
ATOM 21 C6 C B2629 49.290 109.932 160.068 1.00 47.06 C
ATOM 22 P U B2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 23 OP1 U B2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 24 OP2 U B2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 25 O5' U B2630 44.866 105.911 156.976 1.00 46.10 O
TER
ATOM 2 P C A2619 48.520 111.632 165.880 1.00 50.13 P
ATOM 3 OP1 C A2619 48.992 111.394 167.272 1.00 49.69 O
ATOM 4 OP2 C A2619 48.391 110.477 164.944 1.00 49.56 O
ATOM 5 O5' C A2619 47.114 112.376 165.916 1.00 44.88 O
ATOM 6 C5' C A2619 46.927 113.556 166.710 1.00 44.91 C
ATOM 7 C4' C A2619 45.497 114.027 166.606 1.00 46.35 C
ATOM 8 O4' C A2619 45.233 114.503 165.259 1.00 46.01 O
ATOM 9 C3' C A2619 44.439 112.957 166.824 1.00 45.66 C
ATOM 10 O3' C A2619 44.205 112.718 168.200 1.00 47.28 O
ATOM 11 C2' C A2619 43.232 113.567 166.136 1.00 46.41 C
ATOM 12 O2' C A2619 42.622 114.567 166.926 1.00 47.33 O
ATOM 13 C1' C A2619 43.886 114.227 164.919 1.00 45.04 C
ATOM 14 N1 C A2619 43.861 113.391 163.703 1.00 44.17 N
ATOM 15 C2 C A2619 42.661 113.282 162.993 1.00 44.14 C
ATOM 16 O2 C A2619 41.657 113.867 163.421 1.00 43.91 O
ATOM 17 N3 C A2619 42.625 112.543 161.860 1.00 44.92 N
ATOM 18 C4 C A2619 43.726 111.926 161.430 1.00 45.00 C
ATOM 19 N4 C A2619 43.647 111.219 160.293 1.00 43.35 N
ATOM 20 C5 C A2619 44.959 112.005 162.142 1.00 44.59 C
ATOM 21 C6 C A2619 44.981 112.740 163.263 1.00 45.35 C
ATOM 22 P U A2620 43.948 111.218 168.713 1.00 49.12 P
ATOM 23 OP1 U A2620 43.928 111.245 170.203 1.00 51.90 O
ATOM 24 OP2 U A2620 44.902 110.319 168.013 1.00 48.24 O
ATOM 25 O5' U A2620 42.474 110.897 168.214 1.00 46.63 O
TER
ATOM 1 O3' U B2628 48.459 105.191 162.004 1.00 47.61 O
ATOM 2 P C B2629 48.621 106.567 162.815 1.00 48.91 P
ATOM 3 OP1 C B2629 50.063 106.890 162.865 1.00 50.09 O
ATOM 4 OP2 C B2629 47.852 106.440 164.082 1.00 52.40 O
ATOM 5 O5' C B2629 47.918 107.667 161.902 1.00 47.07 O
ATOM 6 C5' C B2629 46.508 107.934 162.002 1.00 46.07 C
ATOM 7 C4' C B2629 46.012 108.577 160.730 1.00 46.45 C
ATOM 8 O4' C B2629 46.693 109.839 160.533 1.00 46.78 O
ATOM 9 C3' C B2629 46.280 107.777 159.466 1.00 46.43 C
ATOM 10 O3' C B2629 45.202 106.862 159.266 1.00 45.24 O
ATOM 11 C2' C B2629 46.348 108.859 158.395 1.00 46.86 C
ATOM 12 O2' C B2629 45.070 109.283 157.984 1.00 50.21 O
ATOM 13 C1' C B2629 46.987 110.018 159.163 1.00 46.29 C
ATOM 14 N1 C B2629 48.448 110.198 159.022 1.00 47.95 N
ATOM 15 C2 C B2629 48.965 110.686 157.807 1.00 48.99 C
ATOM 16 O2 C B2629 48.194 110.863 156.845 1.00 51.06 O
ATOM 17 N3 C B2629 50.291 110.947 157.713 1.00 48.75 N
ATOM 18 C4 C B2629 51.093 110.728 158.760 1.00 48.63 C
ATOM 19 N4 C B2629 52.390 111.049 158.636 1.00 46.19 N
ATOM 20 C5 C B2629 50.603 110.183 159.983 1.00 48.18 C
ATOM 21 C6 C B2629 49.290 109.932 160.068 1.00 47.06 C
ATOM 22 P U B2630 45.425 105.517 158.418 1.00 46.88 P
ATOM 23 OP1 U B2630 44.521 104.483 158.988 1.00 45.42 O
ATOM 24 OP2 U B2630 46.880 105.230 158.308 1.00 45.09 O
ATOM 25 O5' U B2630 44.866 105.911 156.976 1.00 46.10 O
TER
Atoms:
C2: (42.661,113.282,162.993)
OP1: (48.992,111.394,167.272)
OP2: (48.391,110.477,164.944)
C4: (43.726,111.926,161.430)
O5': (47.114,112.376,165.916)
C3': (44.439,112.957,166.824)
C1': (43.886,114.227,164.919)
O4': (45.233,114.503,165.259)
C5': (46.927,113.556,166.710)
P: (48.520,111.632,165.880)
O2: (41.657,113.867,163.421)
C4': (45.497,114.027,166.606)
C2': (43.232,113.567,166.136)
O2': (42.622,114.567,166.926)
N1: (43.861,113.391,163.703)
N3: (42.625,112.543,161.860)
N4: (43.647,111.219,160.293)
C6: (44.981,112.740,163.263)
C5: (44.959,112.005,162.142)
O3': (44.205,112.718,168.200)
OP1: (48.992,111.394,167.272)
OP2: (48.391,110.477,164.944)
C4: (43.726,111.926,161.430)
O5': (47.114,112.376,165.916)
C3': (44.439,112.957,166.824)
C1': (43.886,114.227,164.919)
O4': (45.233,114.503,165.259)
C5': (46.927,113.556,166.710)
P: (48.520,111.632,165.880)
O2: (41.657,113.867,163.421)
C4': (45.497,114.027,166.606)
C2': (43.232,113.567,166.136)
O2': (42.622,114.567,166.926)
N1: (43.861,113.391,163.703)
N3: (42.625,112.543,161.860)
N4: (43.647,111.219,160.293)
C6: (44.981,112.740,163.263)
C5: (44.959,112.005,162.142)
O3': (44.205,112.718,168.200)
C2: (48.965,110.686,157.807)
OP1: (50.063,106.890,162.865)
OP2: (47.852,106.440,164.082)
C4: (51.093,110.728,158.760)
O5': (47.918,107.667,161.902)
C3': (46.280,107.777,159.466)
C1': (46.987,110.018,159.163)
O4': (46.693,109.839,160.533)
C5': (46.508,107.934,162.002)
P: (48.621,106.567,162.815)
O2: (48.194,110.863,156.845)
C4': (46.012,108.577,160.730)
C2': (46.348,108.859,158.395)
O2': (45.070,109.283,157.984)
N1: (48.448,110.198,159.022)
N3: (50.291,110.947,157.713)
N4: (52.390,111.049,158.636)
C6: (49.290,109.932,160.068)
C5: (50.603,110.183,159.983)
O3': (45.202,106.862,159.266)
OP1: (50.063,106.890,162.865)
OP2: (47.852,106.440,164.082)
C4: (51.093,110.728,158.760)
O5': (47.918,107.667,161.902)
C3': (46.280,107.777,159.466)
C1': (46.987,110.018,159.163)
O4': (46.693,109.839,160.533)
C5': (46.508,107.934,162.002)
P: (48.621,106.567,162.815)
O2: (48.194,110.863,156.845)
C4': (46.012,108.577,160.730)
C2': (46.348,108.859,158.395)
O2': (45.070,109.283,157.984)
N1: (48.448,110.198,159.022)
N3: (50.291,110.947,157.713)
N4: (52.390,111.049,158.636)
C6: (49.290,109.932,160.068)
C5: (50.603,110.183,159.983)
O3': (45.202,106.862,159.266)
Image (generated by PyMOL):