ClaRNA

Doublet info:

Details

Nucleotide types: GA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3F1H:A1718:A1720

Extra

PDB:
ATOM 1 O3' A A1717 -49.271 -19.206 -13.397 1.00 69.56 O
ATOM 2 P G A1718 -48.385 -19.984 -12.326 1.00 53.92 P
ATOM 3 OP1 G A1718 -49.264 -20.825 -11.489 1.00 56.57 O
ATOM 4 OP2 G A1718 -47.475 -19.012 -11.675 1.00 57.27 O
ATOM 5 O5' G A1718 -47.535 -20.883 -13.337 1.00 54.50 O
ATOM 6 C5' G A1718 -46.723 -20.207 -14.273 1.00 62.79 C
ATOM 7 C4' G A1718 -46.760 -20.865 -15.635 1.00 56.17 C
ATOM 8 O4' G A1718 -46.524 -22.291 -15.526 1.00 56.99 O
ATOM 9 C3' G A1718 -48.079 -20.736 -16.364 1.00 60.64 C
ATOM 10 O3' G A1718 -47.789 -20.603 -17.745 1.00 56.64 O
ATOM 11 C2' G A1718 -48.741 -22.064 -16.029 1.00 62.10 C
ATOM 12 O2' G A1718 -49.812 -22.361 -16.908 1.00 67.23 O
ATOM 13 C1' G A1718 -47.532 -22.975 -16.220 1.00 56.70 C
ATOM 14 N9 G A1718 -47.619 -24.272 -15.571 1.00 65.25 N
ATOM 15 C8 G A1718 -48.084 -24.507 -14.303 1.00 78.96 C
ATOM 16 N7 G A1718 -48.051 -25.768 -13.968 1.00 78.32 N
ATOM 17 C5 G A1718 -47.525 -26.412 -15.081 1.00 63.92 C
ATOM 18 C6 G A1718 -47.263 -27.786 -15.298 1.00 63.10 C
ATOM 19 O6 G A1718 -47.437 -28.745 -14.525 1.00 81.94 O
ATOM 20 N1 G A1718 -46.740 -28.006 -16.564 1.00 59.88 N
ATOM 21 C2 G A1718 -46.501 -27.033 -17.491 1.00 69.88 C
ATOM 22 N2 G A1718 -45.987 -27.457 -18.649 1.00 81.32 N
ATOM 23 N3 G A1718 -46.741 -25.743 -17.305 1.00 66.86 N
ATOM 24 C4 G A1718 -47.250 -25.502 -16.077 1.00 64.16 C
ATOM 25 P A A1719 -47.880 -19.154 -18.414 1.00 51.24 P
ATOM 26 OP1 A A1719 -47.602 -19.337 -19.858 1.00 48.11 O
ATOM 27 OP2 A A1719 -47.082 -18.174 -17.624 1.00 50.32 O
ATOM 28 O5' A A1719 -49.438 -18.829 -18.200 1.00 49.16 O
TER

ATOM 1 O3' A B1719 -52.128 -22.106 -18.833 1.00 46.77 O
ATOM 2 P A B1720 -51.613 -23.027 -20.036 1.00 56.20 P
ATOM 3 OP1 A B1720 -51.894 -24.429 -19.675 1.00 61.11 O
ATOM 4 OP2 A B1720 -50.231 -22.617 -20.377 1.00 53.91 O
ATOM 5 O5' A B1720 -52.567 -22.621 -21.244 1.00 55.33 O
ATOM 6 C5' A B1720 -53.907 -23.052 -21.245 1.00 56.69 C
ATOM 7 C4' A B1720 -54.715 -22.151 -22.153 1.00 63.07 C
ATOM 8 O4' A B1720 -54.360 -20.763 -21.916 1.00 61.83 O
ATOM 9 C3' A B1720 -54.425 -22.331 -23.632 1.00 61.10 C
ATOM 10 O3' A B1720 -55.115 -23.450 -24.162 1.00 58.30 O
ATOM 11 C2' A B1720 -55.000 -21.034 -24.177 1.00 58.09 C
ATOM 12 O2' A B1720 -56.409 -21.067 -24.224 1.00 68.21 O
ATOM 13 C1' A B1720 -54.508 -20.046 -23.131 1.00 64.52 C
ATOM 14 N9 A B1720 -53.228 -19.558 -23.593 1.00 63.52 N
ATOM 15 C8 A B1720 -52.002 -20.086 -23.331 1.00 69.98 C
ATOM 16 N7 A B1720 -51.020 -19.445 -23.911 1.00 73.76 N
ATOM 17 C5 A B1720 -51.651 -18.436 -24.605 1.00 65.87 C
ATOM 18 C6 A B1720 -51.159 -17.409 -25.425 1.00 70.96 C
ATOM 19 N6 A B1720 -49.860 -17.243 -25.678 1.00 81.79 N
ATOM 20 N1 A B1720 -52.054 -16.562 -25.973 1.00 76.57 N
ATOM 21 C2 A B1720 -53.351 -16.749 -25.708 1.00 75.18 C
ATOM 22 N3 A B1720 -53.927 -17.682 -24.952 1.00 72.92 N
ATOM 23 C4 A B1720 -53.013 -18.499 -24.426 1.00 63.44 C
ATOM 24 P G B1721 -54.277 -24.566 -24.933 1.00 80.62 P
ATOM 25 OP1 G B1721 -55.257 -25.514 -25.498 1.00 99.17 O
ATOM 26 OP2 G B1721 -53.216 -25.011 -24.002 1.00 70.86 O
ATOM 27 O5' G B1721 -53.573 -23.806 -26.150 1.00 75.25 O
TER

Atoms:
OP1: (-49.264,-20.825,-11.489)
OP2: (-47.475,-19.012,-11.675)
C3': (-48.079,-20.736,-16.364)
C1': (-47.532,-22.975,-16.220)
C5': (-46.723,-20.207,-14.273)
O6: (-47.437,-28.745,-14.525)
O4': (-46.524,-22.291,-15.526)
C8: (-48.084,-24.507,-14.303)
C2: (-46.501,-27.033,-17.491)
C6: (-47.263,-27.786,-15.298)
C5: (-47.525,-26.412,-15.081)
C4: (-47.250,-25.502,-16.077)
P: (-48.385,-19.984,-12.326)
C4': (-46.760,-20.865,-15.635)
C2': (-48.741,-22.064,-16.029)
O2': (-49.812,-22.361,-16.908)
N1: (-46.740,-28.006,-16.564)
N2: (-45.987,-27.457,-18.649)
N3: (-46.741,-25.743,-17.305)
N7: (-48.051,-25.768,-13.968)
N9: (-47.619,-24.272,-15.571)
O5': (-47.535,-20.883,-13.337)
O3': (-47.789,-20.603,-17.745)
OP1: (-51.894,-24.429,-19.675)
OP2: (-50.231,-22.617,-20.377)
C3': (-54.425,-22.331,-23.632)
C1': (-54.508,-20.046,-23.131)
C5': (-53.907,-23.052,-21.245)
O4': (-54.360,-20.763,-21.916)
C8: (-52.002,-20.086,-23.331)
O2': (-56.409,-21.067,-24.224)
C6: (-51.159,-17.409,-25.425)
C5: (-51.651,-18.436,-24.605)
C4: (-53.013,-18.499,-24.426)
P: (-51.613,-23.027,-20.036)
C4': (-54.715,-22.151,-22.153)
C2': (-55.000,-21.034,-24.177)
C2: (-53.351,-16.749,-25.708)
N1: (-52.054,-16.562,-25.973)
N3: (-53.927,-17.682,-24.952)
N6: (-49.860,-17.243,-25.678)
N7: (-51.020,-19.445,-23.911)
N9: (-53.228,-19.558,-23.593)
O5': (-52.567,-22.621,-21.244)
O3': (-55.115,-23.450,-24.162)
Image (generated by PyMOL):
PyMOL image
show in jmol