Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0104:0103
Extra
PDB:
ATOM 1 O3' A A 103 78.060 141.622 35.784 1.00 33.56 O
ATOM 2 P A A 104 79.542 142.152 35.456 1.00 34.53 P
ATOM 3 OP1 A A 104 80.217 141.198 34.527 1.00 32.64 O
ATOM 4 OP2 A A 104 80.178 142.477 36.756 1.00 34.69 O
ATOM 5 O5' A A 104 79.291 143.506 34.656 1.00 33.06 O
ATOM 6 C5' A A 104 78.975 144.732 35.333 1.00 32.49 C
ATOM 7 C4' A A 104 78.890 145.852 34.330 1.00 32.51 C
ATOM 8 O4' A A 104 77.720 145.640 33.489 1.00 31.96 O
ATOM 9 C3' A A 104 78.753 147.264 34.901 1.00 33.86 C
ATOM 10 O3' A A 104 79.432 148.191 34.052 1.00 34.05 O
ATOM 11 C2' A A 104 77.256 147.520 34.767 1.00 34.59 C
ATOM 12 O2' A A 104 76.915 148.885 34.688 1.00 36.60 O
ATOM 13 C1' A A 104 76.972 146.834 33.438 1.00 34.57 C
ATOM 14 N9 A A 104 75.566 146.527 33.185 1.00 35.99 N
ATOM 15 C8 A A 104 74.743 145.632 33.817 1.00 37.04 C
ATOM 16 N7 A A 104 73.516 145.624 33.350 1.00 39.07 N
ATOM 17 C5 A A 104 73.535 146.572 32.339 1.00 37.70 C
ATOM 18 C6 A A 104 72.543 147.040 31.452 1.00 38.63 C
ATOM 19 N6 A A 104 71.287 146.593 31.430 1.00 37.96 N
ATOM 20 N1 A A 104 72.893 148.000 30.570 1.00 38.82 N
ATOM 21 C2 A A 104 74.152 148.443 30.577 1.00 39.28 C
ATOM 22 N3 A A 104 75.174 148.078 31.351 1.00 39.71 N
ATOM 23 C4 A A 104 74.793 147.131 32.223 1.00 37.68 C
ATOM 24 P U A 105 81.037 148.313 34.098 1.00 35.20 P
ATOM 25 OP1 U A 105 81.647 147.047 34.582 1.00 34.16 O
ATOM 26 OP2 U A 105 81.359 149.584 34.780 1.00 36.41 O
ATOM 27 O5' U A 105 81.388 148.477 32.556 1.00 38.41 O
TER
ATOM 1 O3' G B 102 74.514 145.252 38.288 1.00 30.41 O
ATOM 2 P A B 103 75.928 144.724 37.769 1.00 33.90 P
ATOM 3 OP1 A B 103 76.479 143.836 38.823 1.00 32.34 O
ATOM 4 OP2 A B 103 76.714 145.896 37.314 1.00 33.71 O
ATOM 5 O5' A B 103 75.564 143.835 36.497 1.00 34.13 O
ATOM 6 C5' A B 103 75.136 142.476 36.660 1.00 34.64 C
ATOM 7 C4' A B 103 75.639 141.615 35.527 1.00 34.10 C
ATOM 8 O4' A B 103 74.770 141.716 34.372 1.00 35.70 O
ATOM 9 C3' A B 103 76.981 141.994 34.942 1.00 33.80 C
ATOM 10 O3' A B 103 78.060 141.622 35.784 1.00 33.56 O
ATOM 11 C2' A B 103 76.976 141.226 33.622 1.00 33.48 C
ATOM 12 O2' A B 103 77.365 139.881 33.790 1.00 30.77 O
ATOM 13 C1' A B 103 75.492 141.291 33.226 1.00 35.52 C
ATOM 14 N9 A B 103 75.155 142.171 32.100 1.00 38.33 N
ATOM 15 C8 A B 103 75.804 143.304 31.674 1.00 38.64 C
ATOM 16 N7 A B 103 75.252 143.868 30.627 1.00 39.41 N
ATOM 17 C5 A B 103 74.165 143.055 30.342 1.00 40.16 C
ATOM 18 C6 A B 103 73.174 143.108 29.341 1.00 41.11 C
ATOM 19 N6 A B 103 73.111 144.055 28.399 1.00 40.72 N
ATOM 20 N1 A B 103 72.234 142.140 29.340 1.00 40.25 N
ATOM 21 C2 A B 103 72.290 141.197 30.274 1.00 37.63 C
ATOM 22 N3 A B 103 73.164 141.037 31.259 1.00 39.60 N
ATOM 23 C4 A B 103 74.090 142.009 31.240 1.00 39.31 C
ATOM 24 P A B 104 79.542 142.152 35.456 1.00 34.53 P
ATOM 25 OP1 A B 104 80.217 141.198 34.527 1.00 32.64 O
ATOM 26 OP2 A B 104 80.178 142.477 36.756 1.00 34.69 O
ATOM 27 O5' A B 104 79.291 143.506 34.656 1.00 33.06 O
TER
ATOM 2 P A A 104 79.542 142.152 35.456 1.00 34.53 P
ATOM 3 OP1 A A 104 80.217 141.198 34.527 1.00 32.64 O
ATOM 4 OP2 A A 104 80.178 142.477 36.756 1.00 34.69 O
ATOM 5 O5' A A 104 79.291 143.506 34.656 1.00 33.06 O
ATOM 6 C5' A A 104 78.975 144.732 35.333 1.00 32.49 C
ATOM 7 C4' A A 104 78.890 145.852 34.330 1.00 32.51 C
ATOM 8 O4' A A 104 77.720 145.640 33.489 1.00 31.96 O
ATOM 9 C3' A A 104 78.753 147.264 34.901 1.00 33.86 C
ATOM 10 O3' A A 104 79.432 148.191 34.052 1.00 34.05 O
ATOM 11 C2' A A 104 77.256 147.520 34.767 1.00 34.59 C
ATOM 12 O2' A A 104 76.915 148.885 34.688 1.00 36.60 O
ATOM 13 C1' A A 104 76.972 146.834 33.438 1.00 34.57 C
ATOM 14 N9 A A 104 75.566 146.527 33.185 1.00 35.99 N
ATOM 15 C8 A A 104 74.743 145.632 33.817 1.00 37.04 C
ATOM 16 N7 A A 104 73.516 145.624 33.350 1.00 39.07 N
ATOM 17 C5 A A 104 73.535 146.572 32.339 1.00 37.70 C
ATOM 18 C6 A A 104 72.543 147.040 31.452 1.00 38.63 C
ATOM 19 N6 A A 104 71.287 146.593 31.430 1.00 37.96 N
ATOM 20 N1 A A 104 72.893 148.000 30.570 1.00 38.82 N
ATOM 21 C2 A A 104 74.152 148.443 30.577 1.00 39.28 C
ATOM 22 N3 A A 104 75.174 148.078 31.351 1.00 39.71 N
ATOM 23 C4 A A 104 74.793 147.131 32.223 1.00 37.68 C
ATOM 24 P U A 105 81.037 148.313 34.098 1.00 35.20 P
ATOM 25 OP1 U A 105 81.647 147.047 34.582 1.00 34.16 O
ATOM 26 OP2 U A 105 81.359 149.584 34.780 1.00 36.41 O
ATOM 27 O5' U A 105 81.388 148.477 32.556 1.00 38.41 O
TER
ATOM 1 O3' G B 102 74.514 145.252 38.288 1.00 30.41 O
ATOM 2 P A B 103 75.928 144.724 37.769 1.00 33.90 P
ATOM 3 OP1 A B 103 76.479 143.836 38.823 1.00 32.34 O
ATOM 4 OP2 A B 103 76.714 145.896 37.314 1.00 33.71 O
ATOM 5 O5' A B 103 75.564 143.835 36.497 1.00 34.13 O
ATOM 6 C5' A B 103 75.136 142.476 36.660 1.00 34.64 C
ATOM 7 C4' A B 103 75.639 141.615 35.527 1.00 34.10 C
ATOM 8 O4' A B 103 74.770 141.716 34.372 1.00 35.70 O
ATOM 9 C3' A B 103 76.981 141.994 34.942 1.00 33.80 C
ATOM 10 O3' A B 103 78.060 141.622 35.784 1.00 33.56 O
ATOM 11 C2' A B 103 76.976 141.226 33.622 1.00 33.48 C
ATOM 12 O2' A B 103 77.365 139.881 33.790 1.00 30.77 O
ATOM 13 C1' A B 103 75.492 141.291 33.226 1.00 35.52 C
ATOM 14 N9 A B 103 75.155 142.171 32.100 1.00 38.33 N
ATOM 15 C8 A B 103 75.804 143.304 31.674 1.00 38.64 C
ATOM 16 N7 A B 103 75.252 143.868 30.627 1.00 39.41 N
ATOM 17 C5 A B 103 74.165 143.055 30.342 1.00 40.16 C
ATOM 18 C6 A B 103 73.174 143.108 29.341 1.00 41.11 C
ATOM 19 N6 A B 103 73.111 144.055 28.399 1.00 40.72 N
ATOM 20 N1 A B 103 72.234 142.140 29.340 1.00 40.25 N
ATOM 21 C2 A B 103 72.290 141.197 30.274 1.00 37.63 C
ATOM 22 N3 A B 103 73.164 141.037 31.259 1.00 39.60 N
ATOM 23 C4 A B 103 74.090 142.009 31.240 1.00 39.31 C
ATOM 24 P A B 104 79.542 142.152 35.456 1.00 34.53 P
ATOM 25 OP1 A B 104 80.217 141.198 34.527 1.00 32.64 O
ATOM 26 OP2 A B 104 80.178 142.477 36.756 1.00 34.69 O
ATOM 27 O5' A B 104 79.291 143.506 34.656 1.00 33.06 O
TER
Atoms:
OP1: (80.217,141.198,34.527)
OP2: (80.178,142.477,36.756)
C3': (78.753,147.264,34.901)
C1': (76.972,146.834,33.438)
C5': (78.975,144.732,35.333)
O4': (77.720,145.640,33.489)
C8: (74.743,145.632,33.817)
O2': (76.915,148.885,34.688)
C6: (72.543,147.040,31.452)
C5: (73.535,146.572,32.339)
C4: (74.793,147.131,32.223)
P: (79.542,142.152,35.456)
C4': (78.890,145.852,34.330)
C2': (77.256,147.520,34.767)
C2: (74.152,148.443,30.577)
N1: (72.893,148.000,30.570)
N3: (75.174,148.078,31.351)
N6: (71.287,146.593,31.430)
N7: (73.516,145.624,33.350)
N9: (75.566,146.527,33.185)
O5': (79.291,143.506,34.656)
O3': (79.432,148.191,34.052)
OP2: (80.178,142.477,36.756)
C3': (78.753,147.264,34.901)
C1': (76.972,146.834,33.438)
C5': (78.975,144.732,35.333)
O4': (77.720,145.640,33.489)
C8: (74.743,145.632,33.817)
O2': (76.915,148.885,34.688)
C6: (72.543,147.040,31.452)
C5: (73.535,146.572,32.339)
C4: (74.793,147.131,32.223)
P: (79.542,142.152,35.456)
C4': (78.890,145.852,34.330)
C2': (77.256,147.520,34.767)
C2: (74.152,148.443,30.577)
N1: (72.893,148.000,30.570)
N3: (75.174,148.078,31.351)
N6: (71.287,146.593,31.430)
N7: (73.516,145.624,33.350)
N9: (75.566,146.527,33.185)
O5': (79.291,143.506,34.656)
O3': (79.432,148.191,34.052)
OP1: (76.479,143.836,38.823)
OP2: (76.714,145.896,37.314)
C3': (76.981,141.994,34.942)
C1': (75.492,141.291,33.226)
C5': (75.136,142.476,36.660)
O4': (74.770,141.716,34.372)
C8: (75.804,143.304,31.674)
O2': (77.365,139.881,33.790)
C6: (73.174,143.108,29.341)
C5: (74.165,143.055,30.342)
C4: (74.090,142.009,31.240)
P: (75.928,144.724,37.769)
C4': (75.639,141.615,35.527)
C2': (76.976,141.226,33.622)
C2: (72.290,141.197,30.274)
N1: (72.234,142.140,29.340)
N3: (73.164,141.037,31.259)
N6: (73.111,144.055,28.399)
N7: (75.252,143.868,30.627)
N9: (75.155,142.171,32.100)
O5': (75.564,143.835,36.497)
O3': (78.060,141.622,35.784)
OP2: (76.714,145.896,37.314)
C3': (76.981,141.994,34.942)
C1': (75.492,141.291,33.226)
C5': (75.136,142.476,36.660)
O4': (74.770,141.716,34.372)
C8: (75.804,143.304,31.674)
O2': (77.365,139.881,33.790)
C6: (73.174,143.108,29.341)
C5: (74.165,143.055,30.342)
C4: (74.090,142.009,31.240)
P: (75.928,144.724,37.769)
C4': (75.639,141.615,35.527)
C2': (76.976,141.226,33.622)
C2: (72.290,141.197,30.274)
N1: (72.234,142.140,29.340)
N3: (73.164,141.037,31.259)
N6: (73.111,144.055,28.399)
N7: (75.252,143.868,30.627)
N9: (75.155,142.171,32.100)
O5': (75.564,143.835,36.497)
O3': (78.060,141.622,35.784)
Image (generated by PyMOL):