Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1K9M:A586:A547
Extra
PDB:
ATOM 1 O3' A A 585 -17.261 110.413 87.668 1.00 69.67 O
ATOM 2 P C A 586 -17.548 111.996 87.730 1.00 70.94 P
ATOM 3 OP1 C A 586 -18.425 112.314 86.582 1.00 72.15 O
ATOM 4 OP2 C A 586 -16.281 112.746 87.907 1.00 70.80 O
ATOM 5 O5' C A 586 -18.400 112.166 89.063 1.00 72.99 O
ATOM 6 C5' C A 586 -19.721 111.601 89.184 1.00 75.20 C
ATOM 7 C4' C A 586 -20.328 111.962 90.523 1.00 77.79 C
ATOM 8 O4' C A 586 -19.640 111.262 91.595 1.00 79.18 O
ATOM 9 C3' C A 586 -20.239 113.426 90.923 1.00 78.67 C
ATOM 10 O3' C A 586 -21.233 114.239 90.300 1.00 78.59 O
ATOM 11 C2' C A 586 -20.395 113.363 92.437 1.00 79.75 C
ATOM 12 O2' C A 586 -21.741 113.277 92.857 1.00 79.23 O
ATOM 13 C1' C A 586 -19.639 112.070 92.769 1.00 80.65 C
ATOM 14 N1 C A 586 -18.240 112.327 93.182 1.00 82.93 N
ATOM 15 C2 C A 586 -17.939 112.462 94.555 1.00 84.81 C
ATOM 16 O2 C A 586 -18.839 112.298 95.404 1.00 86.25 O
ATOM 17 N3 C A 586 -16.672 112.764 94.919 1.00 85.67 N
ATOM 18 C4 C A 586 -15.724 112.916 93.990 1.00 85.24 C
ATOM 19 N4 C A 586 -14.497 113.244 94.400 1.00 86.01 N
ATOM 20 C5 C A 586 -15.993 112.747 92.603 1.00 84.46 C
ATOM 21 C6 C A 586 -17.248 112.457 92.248 1.00 83.78 C
ATOM 22 P G A 587 -20.914 115.782 89.974 1.00 77.96 P
ATOM 23 OP1 G A 587 -22.121 116.329 89.329 1.00 78.97 O
ATOM 24 OP2 G A 587 -19.606 115.885 89.283 1.00 78.88 O
ATOM 25 O5' G A 587 -20.767 116.459 91.405 1.00 77.65 O
TER
ATOM 1 O3' C B 546 -8.965 117.002 103.068 1.00 83.78 O
ATOM 2 P U B 547 -9.321 115.457 103.336 1.00 85.01 P
ATOM 3 OP1 U B 547 -8.474 115.004 104.468 1.00 85.44 O
ATOM 4 OP2 U B 547 -9.289 114.719 102.043 1.00 85.11 O
ATOM 5 O5' U B 547 -10.828 115.474 103.839 1.00 84.74 O
ATOM 6 C5' U B 547 -11.827 116.139 103.071 1.00 83.78 C
ATOM 7 C4' U B 547 -13.202 115.842 103.604 1.00 83.25 C
ATOM 8 O4' U B 547 -14.147 116.557 102.763 1.00 82.97 O
ATOM 9 C3' U B 547 -13.612 114.374 103.530 1.00 82.87 C
ATOM 10 O3' U B 547 -13.374 113.669 104.746 1.00 81.74 O
ATOM 11 C2' U B 547 -15.083 114.449 103.156 1.00 82.70 C
ATOM 12 O2' U B 547 -15.899 114.719 104.278 1.00 81.10 O
ATOM 13 C1' U B 547 -15.066 115.645 102.204 1.00 83.40 C
ATOM 14 N1 U B 547 -14.626 115.312 100.835 1.00 84.76 N
ATOM 15 C2 U B 547 -15.601 115.206 99.864 1.00 86.13 C
ATOM 16 O2 U B 547 -16.787 115.408 100.083 1.00 87.39 O
ATOM 17 N3 U B 547 -15.142 114.861 98.616 1.00 87.12 N
ATOM 18 C4 U B 547 -13.837 114.632 98.236 1.00 87.70 C
ATOM 19 O4 U B 547 -13.592 114.329 97.066 1.00 88.49 O
ATOM 20 C5 U B 547 -12.879 114.776 99.286 1.00 86.99 C
ATOM 21 C6 U B 547 -13.292 115.100 100.516 1.00 85.55 C
ATOM 22 P C B 548 -13.100 112.087 104.707 1.00 81.11 P
ATOM 23 OP1 C B 548 -13.238 111.589 106.098 1.00 81.12 O
ATOM 24 OP2 C B 548 -11.825 111.873 103.973 1.00 81.35 O
ATOM 25 O5' C B 548 -14.298 111.495 103.834 1.00 78.34 O
TER
ATOM 2 P C A 586 -17.548 111.996 87.730 1.00 70.94 P
ATOM 3 OP1 C A 586 -18.425 112.314 86.582 1.00 72.15 O
ATOM 4 OP2 C A 586 -16.281 112.746 87.907 1.00 70.80 O
ATOM 5 O5' C A 586 -18.400 112.166 89.063 1.00 72.99 O
ATOM 6 C5' C A 586 -19.721 111.601 89.184 1.00 75.20 C
ATOM 7 C4' C A 586 -20.328 111.962 90.523 1.00 77.79 C
ATOM 8 O4' C A 586 -19.640 111.262 91.595 1.00 79.18 O
ATOM 9 C3' C A 586 -20.239 113.426 90.923 1.00 78.67 C
ATOM 10 O3' C A 586 -21.233 114.239 90.300 1.00 78.59 O
ATOM 11 C2' C A 586 -20.395 113.363 92.437 1.00 79.75 C
ATOM 12 O2' C A 586 -21.741 113.277 92.857 1.00 79.23 O
ATOM 13 C1' C A 586 -19.639 112.070 92.769 1.00 80.65 C
ATOM 14 N1 C A 586 -18.240 112.327 93.182 1.00 82.93 N
ATOM 15 C2 C A 586 -17.939 112.462 94.555 1.00 84.81 C
ATOM 16 O2 C A 586 -18.839 112.298 95.404 1.00 86.25 O
ATOM 17 N3 C A 586 -16.672 112.764 94.919 1.00 85.67 N
ATOM 18 C4 C A 586 -15.724 112.916 93.990 1.00 85.24 C
ATOM 19 N4 C A 586 -14.497 113.244 94.400 1.00 86.01 N
ATOM 20 C5 C A 586 -15.993 112.747 92.603 1.00 84.46 C
ATOM 21 C6 C A 586 -17.248 112.457 92.248 1.00 83.78 C
ATOM 22 P G A 587 -20.914 115.782 89.974 1.00 77.96 P
ATOM 23 OP1 G A 587 -22.121 116.329 89.329 1.00 78.97 O
ATOM 24 OP2 G A 587 -19.606 115.885 89.283 1.00 78.88 O
ATOM 25 O5' G A 587 -20.767 116.459 91.405 1.00 77.65 O
TER
ATOM 1 O3' C B 546 -8.965 117.002 103.068 1.00 83.78 O
ATOM 2 P U B 547 -9.321 115.457 103.336 1.00 85.01 P
ATOM 3 OP1 U B 547 -8.474 115.004 104.468 1.00 85.44 O
ATOM 4 OP2 U B 547 -9.289 114.719 102.043 1.00 85.11 O
ATOM 5 O5' U B 547 -10.828 115.474 103.839 1.00 84.74 O
ATOM 6 C5' U B 547 -11.827 116.139 103.071 1.00 83.78 C
ATOM 7 C4' U B 547 -13.202 115.842 103.604 1.00 83.25 C
ATOM 8 O4' U B 547 -14.147 116.557 102.763 1.00 82.97 O
ATOM 9 C3' U B 547 -13.612 114.374 103.530 1.00 82.87 C
ATOM 10 O3' U B 547 -13.374 113.669 104.746 1.00 81.74 O
ATOM 11 C2' U B 547 -15.083 114.449 103.156 1.00 82.70 C
ATOM 12 O2' U B 547 -15.899 114.719 104.278 1.00 81.10 O
ATOM 13 C1' U B 547 -15.066 115.645 102.204 1.00 83.40 C
ATOM 14 N1 U B 547 -14.626 115.312 100.835 1.00 84.76 N
ATOM 15 C2 U B 547 -15.601 115.206 99.864 1.00 86.13 C
ATOM 16 O2 U B 547 -16.787 115.408 100.083 1.00 87.39 O
ATOM 17 N3 U B 547 -15.142 114.861 98.616 1.00 87.12 N
ATOM 18 C4 U B 547 -13.837 114.632 98.236 1.00 87.70 C
ATOM 19 O4 U B 547 -13.592 114.329 97.066 1.00 88.49 O
ATOM 20 C5 U B 547 -12.879 114.776 99.286 1.00 86.99 C
ATOM 21 C6 U B 547 -13.292 115.100 100.516 1.00 85.55 C
ATOM 22 P C B 548 -13.100 112.087 104.707 1.00 81.11 P
ATOM 23 OP1 C B 548 -13.238 111.589 106.098 1.00 81.12 O
ATOM 24 OP2 C B 548 -11.825 111.873 103.973 1.00 81.35 O
ATOM 25 O5' C B 548 -14.298 111.495 103.834 1.00 78.34 O
TER
Atoms:
C2: (-17.939,112.462,94.555)
OP1: (-18.425,112.314,86.582)
OP2: (-16.281,112.746,87.907)
C4: (-15.724,112.916,93.990)
O5': (-18.400,112.166,89.063)
C3': (-20.239,113.426,90.923)
C1': (-19.639,112.070,92.769)
O4': (-19.640,111.262,91.595)
C5': (-19.721,111.601,89.184)
P: (-17.548,111.996,87.730)
O2: (-18.839,112.298,95.404)
C4': (-20.328,111.962,90.523)
C2': (-20.395,113.363,92.437)
O2': (-21.741,113.277,92.857)
N1: (-18.240,112.327,93.182)
N3: (-16.672,112.764,94.919)
N4: (-14.497,113.244,94.400)
C6: (-17.248,112.457,92.248)
C5: (-15.993,112.747,92.603)
O3': (-21.233,114.239,90.300)
OP1: (-18.425,112.314,86.582)
OP2: (-16.281,112.746,87.907)
C4: (-15.724,112.916,93.990)
O5': (-18.400,112.166,89.063)
C3': (-20.239,113.426,90.923)
C1': (-19.639,112.070,92.769)
O4': (-19.640,111.262,91.595)
C5': (-19.721,111.601,89.184)
P: (-17.548,111.996,87.730)
O2: (-18.839,112.298,95.404)
C4': (-20.328,111.962,90.523)
C2': (-20.395,113.363,92.437)
O2': (-21.741,113.277,92.857)
N1: (-18.240,112.327,93.182)
N3: (-16.672,112.764,94.919)
N4: (-14.497,113.244,94.400)
C6: (-17.248,112.457,92.248)
C5: (-15.993,112.747,92.603)
O3': (-21.233,114.239,90.300)
C4: (-13.837,114.632,98.236)
N3: (-15.142,114.861,98.616)
OP1: (-8.474,115.004,104.468)
OP2: (-9.289,114.719,102.043)
C2: (-15.601,115.206,99.864)
C1': (-15.066,115.645,102.204)
C3': (-13.612,114.374,103.530)
O5': (-10.828,115.474,103.839)
O4': (-14.147,116.557,102.763)
C5': (-11.827,116.139,103.071)
P: (-9.321,115.457,103.336)
C4': (-13.202,115.842,103.604)
C2': (-15.083,114.449,103.156)
O2': (-15.899,114.719,104.278)
N1: (-14.626,115.312,100.835)
O4: (-13.592,114.329,97.066)
O2: (-16.787,115.408,100.083)
C6: (-13.292,115.100,100.516)
C5: (-12.879,114.776,99.286)
O3': (-13.374,113.669,104.746)
N3: (-15.142,114.861,98.616)
OP1: (-8.474,115.004,104.468)
OP2: (-9.289,114.719,102.043)
C2: (-15.601,115.206,99.864)
C1': (-15.066,115.645,102.204)
C3': (-13.612,114.374,103.530)
O5': (-10.828,115.474,103.839)
O4': (-14.147,116.557,102.763)
C5': (-11.827,116.139,103.071)
P: (-9.321,115.457,103.336)
C4': (-13.202,115.842,103.604)
C2': (-15.083,114.449,103.156)
O2': (-15.899,114.719,104.278)
N1: (-14.626,115.312,100.835)
O4: (-13.592,114.329,97.066)
O2: (-16.787,115.408,100.083)
C6: (-13.292,115.100,100.516)
C5: (-12.879,114.776,99.286)
O3': (-13.374,113.669,104.746)
Image (generated by PyMOL):