Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:B26:B54
Extra
PDB:
ATOM 1 O3' C A 25 61.222 12.170 95.971 1.00 88.65 O
ATOM 2 P C A 26 62.772 12.784 96.067 1.00 83.17 P
ATOM 3 OP1 C A 26 63.046 13.631 94.929 1.00 82.83 O
ATOM 4 OP2 C A 26 63.595 11.658 96.376 1.00 83.95 O
ATOM 5 O5' C A 26 62.954 13.823 97.226 1.00 81.84 O
ATOM 6 C5' C A 26 62.268 15.019 97.213 1.00 79.95 C
ATOM 7 C4' C A 26 62.653 15.896 98.370 1.00 78.20 C
ATOM 8 O4' C A 26 62.059 15.372 99.566 1.00 78.86 O
ATOM 9 C3' C A 26 64.129 15.948 98.670 1.00 76.52 C
ATOM 10 O3' C A 26 64.814 16.873 97.839 1.00 72.94 O
ATOM 11 C2' C A 26 64.143 16.376 100.125 1.00 77.21 C
ATOM 12 O2' C A 26 63.924 17.764 100.253 1.00 77.06 O
ATOM 13 C1' C A 26 62.928 15.622 100.667 1.00 78.75 C
ATOM 14 N1 C A 26 63.293 14.342 101.298 1.00 80.47 N
ATOM 15 C2 C A 26 63.779 14.359 102.613 1.00 81.41 C
ATOM 16 O2 C A 26 63.920 15.456 103.193 1.00 81.54 O
ATOM 17 N3 C A 26 64.086 13.195 103.213 1.00 82.40 N
ATOM 18 C4 C A 26 63.948 12.044 102.552 1.00 82.82 C
ATOM 19 N4 C A 26 64.269 10.921 103.204 1.00 83.74 N
ATOM 20 C5 C A 26 63.476 11.995 101.200 1.00 81.82 C
ATOM 21 C6 C A 26 63.159 13.157 100.622 1.00 80.97 C
ATOM 22 P U A 27 66.411 16.801 97.722 1.00 71.00 P
ATOM 23 OP1 U A 27 66.821 17.662 96.579 1.00 69.73 O
ATOM 24 OP2 U A 27 66.759 15.379 97.712 1.00 72.84 O
ATOM 25 O5' U A 27 66.907 17.416 99.104 1.00 70.52 O
TER
ATOM 1 O3' A B 53 69.572 6.893 112.756 1.00 90.22 O
ATOM 2 P U B 54 68.036 6.747 113.186 1.00 89.31 P
ATOM 3 OP1 U B 54 68.029 6.406 114.633 1.00 89.60 O
ATOM 4 OP2 U B 54 67.378 5.848 112.206 1.00 89.49 O
ATOM 5 O5' U B 54 67.452 8.213 113.010 1.00 90.52 O
ATOM 6 C5' U B 54 68.171 9.332 113.526 1.00 91.63 C
ATOM 7 C4' U B 54 67.560 10.625 113.040 1.00 91.47 C
ATOM 8 O4' U B 54 67.499 10.641 111.584 1.00 91.36 O
ATOM 9 C3' U B 54 66.138 10.920 113.515 1.00 90.17 C
ATOM 10 O3' U B 54 66.072 12.266 113.894 1.00 88.52 O
ATOM 11 C2' U B 54 65.289 10.753 112.267 1.00 90.90 C
ATOM 12 O2' U B 54 64.193 11.642 112.290 1.00 92.20 O
ATOM 13 C1' U B 54 66.269 11.201 111.194 1.00 90.86 C
ATOM 14 N1 U B 54 65.929 10.747 109.840 1.00 90.55 N
ATOM 15 C2 U B 54 66.010 11.686 108.834 1.00 89.81 C
ATOM 16 O2 U B 54 66.366 12.822 109.035 1.00 89.98 O
ATOM 17 N3 U B 54 65.646 11.244 107.590 1.00 88.63 N
ATOM 18 C4 U B 54 65.209 9.977 107.260 1.00 89.09 C
ATOM 19 O4 U B 54 64.898 9.733 106.096 1.00 89.05 O
ATOM 20 C5 U B 54 65.161 9.048 108.356 1.00 89.72 C
ATOM 21 C6 U B 54 65.523 9.451 109.577 1.00 90.66 C
ATOM 22 P A B 55 66.398 12.642 115.399 1.00 88.52 P
ATOM 23 OP1 A B 55 66.138 11.387 116.149 1.00 88.37 O
ATOM 24 OP2 A B 55 65.685 13.888 115.789 1.00 88.57 O
ATOM 25 O5' A B 55 67.971 12.909 115.349 1.00 87.08 O
TER
ATOM 2 P C A 26 62.772 12.784 96.067 1.00 83.17 P
ATOM 3 OP1 C A 26 63.046 13.631 94.929 1.00 82.83 O
ATOM 4 OP2 C A 26 63.595 11.658 96.376 1.00 83.95 O
ATOM 5 O5' C A 26 62.954 13.823 97.226 1.00 81.84 O
ATOM 6 C5' C A 26 62.268 15.019 97.213 1.00 79.95 C
ATOM 7 C4' C A 26 62.653 15.896 98.370 1.00 78.20 C
ATOM 8 O4' C A 26 62.059 15.372 99.566 1.00 78.86 O
ATOM 9 C3' C A 26 64.129 15.948 98.670 1.00 76.52 C
ATOM 10 O3' C A 26 64.814 16.873 97.839 1.00 72.94 O
ATOM 11 C2' C A 26 64.143 16.376 100.125 1.00 77.21 C
ATOM 12 O2' C A 26 63.924 17.764 100.253 1.00 77.06 O
ATOM 13 C1' C A 26 62.928 15.622 100.667 1.00 78.75 C
ATOM 14 N1 C A 26 63.293 14.342 101.298 1.00 80.47 N
ATOM 15 C2 C A 26 63.779 14.359 102.613 1.00 81.41 C
ATOM 16 O2 C A 26 63.920 15.456 103.193 1.00 81.54 O
ATOM 17 N3 C A 26 64.086 13.195 103.213 1.00 82.40 N
ATOM 18 C4 C A 26 63.948 12.044 102.552 1.00 82.82 C
ATOM 19 N4 C A 26 64.269 10.921 103.204 1.00 83.74 N
ATOM 20 C5 C A 26 63.476 11.995 101.200 1.00 81.82 C
ATOM 21 C6 C A 26 63.159 13.157 100.622 1.00 80.97 C
ATOM 22 P U A 27 66.411 16.801 97.722 1.00 71.00 P
ATOM 23 OP1 U A 27 66.821 17.662 96.579 1.00 69.73 O
ATOM 24 OP2 U A 27 66.759 15.379 97.712 1.00 72.84 O
ATOM 25 O5' U A 27 66.907 17.416 99.104 1.00 70.52 O
TER
ATOM 1 O3' A B 53 69.572 6.893 112.756 1.00 90.22 O
ATOM 2 P U B 54 68.036 6.747 113.186 1.00 89.31 P
ATOM 3 OP1 U B 54 68.029 6.406 114.633 1.00 89.60 O
ATOM 4 OP2 U B 54 67.378 5.848 112.206 1.00 89.49 O
ATOM 5 O5' U B 54 67.452 8.213 113.010 1.00 90.52 O
ATOM 6 C5' U B 54 68.171 9.332 113.526 1.00 91.63 C
ATOM 7 C4' U B 54 67.560 10.625 113.040 1.00 91.47 C
ATOM 8 O4' U B 54 67.499 10.641 111.584 1.00 91.36 O
ATOM 9 C3' U B 54 66.138 10.920 113.515 1.00 90.17 C
ATOM 10 O3' U B 54 66.072 12.266 113.894 1.00 88.52 O
ATOM 11 C2' U B 54 65.289 10.753 112.267 1.00 90.90 C
ATOM 12 O2' U B 54 64.193 11.642 112.290 1.00 92.20 O
ATOM 13 C1' U B 54 66.269 11.201 111.194 1.00 90.86 C
ATOM 14 N1 U B 54 65.929 10.747 109.840 1.00 90.55 N
ATOM 15 C2 U B 54 66.010 11.686 108.834 1.00 89.81 C
ATOM 16 O2 U B 54 66.366 12.822 109.035 1.00 89.98 O
ATOM 17 N3 U B 54 65.646 11.244 107.590 1.00 88.63 N
ATOM 18 C4 U B 54 65.209 9.977 107.260 1.00 89.09 C
ATOM 19 O4 U B 54 64.898 9.733 106.096 1.00 89.05 O
ATOM 20 C5 U B 54 65.161 9.048 108.356 1.00 89.72 C
ATOM 21 C6 U B 54 65.523 9.451 109.577 1.00 90.66 C
ATOM 22 P A B 55 66.398 12.642 115.399 1.00 88.52 P
ATOM 23 OP1 A B 55 66.138 11.387 116.149 1.00 88.37 O
ATOM 24 OP2 A B 55 65.685 13.888 115.789 1.00 88.57 O
ATOM 25 O5' A B 55 67.971 12.909 115.349 1.00 87.08 O
TER
Atoms:
C2: (63.779,14.359,102.613)
OP1: (63.046,13.631,94.929)
OP2: (63.595,11.658,96.376)
C4: (63.948,12.044,102.552)
O5': (62.954,13.823,97.226)
C3': (64.129,15.948,98.670)
C1': (62.928,15.622,100.667)
O4': (62.059,15.372,99.566)
C5': (62.268,15.019,97.213)
P: (62.772,12.784,96.067)
O2: (63.920,15.456,103.193)
C4': (62.653,15.896,98.370)
C2': (64.143,16.376,100.125)
O2': (63.924,17.764,100.253)
N1: (63.293,14.342,101.298)
N3: (64.086,13.195,103.213)
N4: (64.269,10.921,103.204)
C6: (63.159,13.157,100.622)
C5: (63.476,11.995,101.200)
O3': (64.814,16.873,97.839)
OP1: (63.046,13.631,94.929)
OP2: (63.595,11.658,96.376)
C4: (63.948,12.044,102.552)
O5': (62.954,13.823,97.226)
C3': (64.129,15.948,98.670)
C1': (62.928,15.622,100.667)
O4': (62.059,15.372,99.566)
C5': (62.268,15.019,97.213)
P: (62.772,12.784,96.067)
O2: (63.920,15.456,103.193)
C4': (62.653,15.896,98.370)
C2': (64.143,16.376,100.125)
O2': (63.924,17.764,100.253)
N1: (63.293,14.342,101.298)
N3: (64.086,13.195,103.213)
N4: (64.269,10.921,103.204)
C6: (63.159,13.157,100.622)
C5: (63.476,11.995,101.200)
O3': (64.814,16.873,97.839)
C4: (65.209,9.977,107.260)
N3: (65.646,11.244,107.590)
OP1: (68.029,6.406,114.633)
OP2: (67.378,5.848,112.206)
C2: (66.010,11.686,108.834)
C1': (66.269,11.201,111.194)
C3': (66.138,10.920,113.515)
O5': (67.452,8.213,113.010)
O4': (67.499,10.641,111.584)
C5': (68.171,9.332,113.526)
P: (68.036,6.747,113.186)
C4': (67.560,10.625,113.040)
C2': (65.289,10.753,112.267)
O2': (64.193,11.642,112.290)
N1: (65.929,10.747,109.840)
O4: (64.898,9.733,106.096)
O2: (66.366,12.822,109.035)
C6: (65.523,9.451,109.577)
C5: (65.161,9.048,108.356)
O3': (66.072,12.266,113.894)
N3: (65.646,11.244,107.590)
OP1: (68.029,6.406,114.633)
OP2: (67.378,5.848,112.206)
C2: (66.010,11.686,108.834)
C1': (66.269,11.201,111.194)
C3': (66.138,10.920,113.515)
O5': (67.452,8.213,113.010)
O4': (67.499,10.641,111.584)
C5': (68.171,9.332,113.526)
P: (68.036,6.747,113.186)
C4': (67.560,10.625,113.040)
C2': (65.289,10.753,112.267)
O2': (64.193,11.642,112.290)
N1: (65.929,10.747,109.840)
O4: (64.898,9.733,106.096)
O2: (66.366,12.822,109.035)
C6: (65.523,9.451,109.577)
C5: (65.161,9.048,108.356)
O3': (66.072,12.266,113.894)
Image (generated by PyMOL):