Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02639:02523
Extra
PDB:
ATOM 1 O3' A A2638 54.795 128.333 148.882 1.00 51.54 O
ATOM 2 P A A2639 54.000 129.690 149.192 1.00 51.56 P
ATOM 3 OP1 A A2639 54.566 130.240 150.452 1.00 50.20 O
ATOM 4 OP2 A A2639 52.532 129.438 149.088 1.00 49.65 O
ATOM 5 O5' A A2639 54.445 130.651 148.006 1.00 50.22 O
ATOM 6 C5' A A2639 54.269 130.283 146.625 1.00 47.78 C
ATOM 7 C4' A A2639 55.335 130.946 145.794 1.00 46.36 C
ATOM 8 O4' A A2639 56.585 130.259 146.029 1.00 45.99 O
ATOM 9 C3' A A2639 55.204 130.837 144.289 1.00 47.33 C
ATOM 10 O3' A A2639 54.300 131.815 143.780 1.00 48.92 O
ATOM 11 C2' A A2639 56.627 131.170 143.846 1.00 46.67 C
ATOM 12 O2' A A2639 56.880 132.556 143.896 1.00 50.85 O
ATOM 13 C1' A A2639 57.461 130.526 144.955 1.00 44.60 C
ATOM 14 N9 A A2639 58.166 129.298 144.586 1.00 43.63 N
ATOM 15 C8 A A2639 59.528 129.139 144.532 1.00 45.14 C
ATOM 16 N7 A A2639 59.910 127.943 144.150 1.00 45.11 N
ATOM 17 C5 A A2639 58.718 127.264 143.942 1.00 43.84 C
ATOM 18 C6 A A2639 58.442 125.951 143.521 1.00 43.26 C
ATOM 19 N6 A A2639 59.385 125.051 143.222 1.00 40.37 N
ATOM 20 N1 A A2639 57.147 125.590 143.415 1.00 44.18 N
ATOM 21 C2 A A2639 56.203 126.492 143.716 1.00 45.28 C
ATOM 22 N3 A A2639 56.337 127.752 144.120 1.00 44.58 N
ATOM 23 C4 A A2639 57.634 128.083 144.214 1.00 43.68 C
ATOM 24 P A A2640 52.761 131.429 143.493 1.00 52.03 P
ATOM 25 OP1 A A2640 52.281 132.331 142.414 1.00 53.08 O
ATOM 26 OP2 A A2640 52.030 131.388 144.788 1.00 54.58 O
ATOM 27 O5' A A2640 52.797 129.939 142.926 1.00 51.11 O
TER
ATOM 1 O3' G B2522 60.606 134.111 143.051 1.00 37.48 O
ATOM 2 P A B2523 61.286 133.762 144.465 1.00 35.63 P
ATOM 3 OP1 A B2523 61.422 132.290 144.517 1.00 32.90 O
ATOM 4 OP2 A B2523 60.516 134.459 145.517 1.00 36.16 O
ATOM 5 O5' A B2523 62.749 134.388 144.359 1.00 35.91 O
ATOM 6 C5' A B2523 63.786 133.667 143.673 1.00 38.81 C
ATOM 7 C4' A B2523 65.087 134.438 143.669 1.00 39.23 C
ATOM 8 O4' A B2523 64.885 135.743 143.074 1.00 41.58 O
ATOM 9 C3' A B2523 65.748 134.773 144.994 1.00 39.67 C
ATOM 10 O3' A B2523 66.444 133.661 145.549 1.00 41.67 O
ATOM 11 C2' A B2523 66.721 135.859 144.563 1.00 39.19 C
ATOM 12 O2' A B2523 67.830 135.333 143.866 1.00 39.32 O
ATOM 13 C1' A B2523 65.868 136.641 143.568 1.00 39.77 C
ATOM 14 N9 A B2523 65.203 137.768 144.220 1.00 40.35 N
ATOM 15 C8 A B2523 63.938 137.835 144.751 1.00 37.97 C
ATOM 16 N7 A B2523 63.665 138.986 145.312 1.00 38.27 N
ATOM 17 C5 A B2523 64.821 139.728 145.133 1.00 37.18 C
ATOM 18 C6 A B2523 65.171 141.028 145.509 1.00 38.35 C
ATOM 19 N6 A B2523 64.362 141.843 146.185 1.00 41.03 N
ATOM 20 N1 A B2523 66.398 141.471 145.166 1.00 40.16 N
ATOM 21 C2 A B2523 67.214 140.649 144.494 1.00 38.93 C
ATOM 22 N3 A B2523 67.001 139.405 144.090 1.00 38.67 N
ATOM 23 C4 A B2523 65.770 138.998 144.447 1.00 38.64 C
ATOM 24 P C B2524 66.973 133.730 147.066 1.00 40.39 P
ATOM 25 OP1 C B2524 67.487 132.386 147.424 1.00 40.58 O
ATOM 26 OP2 C B2524 65.920 134.359 147.896 1.00 38.61 O
ATOM 27 O5' C B2524 68.213 134.728 147.010 1.00 39.44 O
TER
ATOM 2 P A A2639 54.000 129.690 149.192 1.00 51.56 P
ATOM 3 OP1 A A2639 54.566 130.240 150.452 1.00 50.20 O
ATOM 4 OP2 A A2639 52.532 129.438 149.088 1.00 49.65 O
ATOM 5 O5' A A2639 54.445 130.651 148.006 1.00 50.22 O
ATOM 6 C5' A A2639 54.269 130.283 146.625 1.00 47.78 C
ATOM 7 C4' A A2639 55.335 130.946 145.794 1.00 46.36 C
ATOM 8 O4' A A2639 56.585 130.259 146.029 1.00 45.99 O
ATOM 9 C3' A A2639 55.204 130.837 144.289 1.00 47.33 C
ATOM 10 O3' A A2639 54.300 131.815 143.780 1.00 48.92 O
ATOM 11 C2' A A2639 56.627 131.170 143.846 1.00 46.67 C
ATOM 12 O2' A A2639 56.880 132.556 143.896 1.00 50.85 O
ATOM 13 C1' A A2639 57.461 130.526 144.955 1.00 44.60 C
ATOM 14 N9 A A2639 58.166 129.298 144.586 1.00 43.63 N
ATOM 15 C8 A A2639 59.528 129.139 144.532 1.00 45.14 C
ATOM 16 N7 A A2639 59.910 127.943 144.150 1.00 45.11 N
ATOM 17 C5 A A2639 58.718 127.264 143.942 1.00 43.84 C
ATOM 18 C6 A A2639 58.442 125.951 143.521 1.00 43.26 C
ATOM 19 N6 A A2639 59.385 125.051 143.222 1.00 40.37 N
ATOM 20 N1 A A2639 57.147 125.590 143.415 1.00 44.18 N
ATOM 21 C2 A A2639 56.203 126.492 143.716 1.00 45.28 C
ATOM 22 N3 A A2639 56.337 127.752 144.120 1.00 44.58 N
ATOM 23 C4 A A2639 57.634 128.083 144.214 1.00 43.68 C
ATOM 24 P A A2640 52.761 131.429 143.493 1.00 52.03 P
ATOM 25 OP1 A A2640 52.281 132.331 142.414 1.00 53.08 O
ATOM 26 OP2 A A2640 52.030 131.388 144.788 1.00 54.58 O
ATOM 27 O5' A A2640 52.797 129.939 142.926 1.00 51.11 O
TER
ATOM 1 O3' G B2522 60.606 134.111 143.051 1.00 37.48 O
ATOM 2 P A B2523 61.286 133.762 144.465 1.00 35.63 P
ATOM 3 OP1 A B2523 61.422 132.290 144.517 1.00 32.90 O
ATOM 4 OP2 A B2523 60.516 134.459 145.517 1.00 36.16 O
ATOM 5 O5' A B2523 62.749 134.388 144.359 1.00 35.91 O
ATOM 6 C5' A B2523 63.786 133.667 143.673 1.00 38.81 C
ATOM 7 C4' A B2523 65.087 134.438 143.669 1.00 39.23 C
ATOM 8 O4' A B2523 64.885 135.743 143.074 1.00 41.58 O
ATOM 9 C3' A B2523 65.748 134.773 144.994 1.00 39.67 C
ATOM 10 O3' A B2523 66.444 133.661 145.549 1.00 41.67 O
ATOM 11 C2' A B2523 66.721 135.859 144.563 1.00 39.19 C
ATOM 12 O2' A B2523 67.830 135.333 143.866 1.00 39.32 O
ATOM 13 C1' A B2523 65.868 136.641 143.568 1.00 39.77 C
ATOM 14 N9 A B2523 65.203 137.768 144.220 1.00 40.35 N
ATOM 15 C8 A B2523 63.938 137.835 144.751 1.00 37.97 C
ATOM 16 N7 A B2523 63.665 138.986 145.312 1.00 38.27 N
ATOM 17 C5 A B2523 64.821 139.728 145.133 1.00 37.18 C
ATOM 18 C6 A B2523 65.171 141.028 145.509 1.00 38.35 C
ATOM 19 N6 A B2523 64.362 141.843 146.185 1.00 41.03 N
ATOM 20 N1 A B2523 66.398 141.471 145.166 1.00 40.16 N
ATOM 21 C2 A B2523 67.214 140.649 144.494 1.00 38.93 C
ATOM 22 N3 A B2523 67.001 139.405 144.090 1.00 38.67 N
ATOM 23 C4 A B2523 65.770 138.998 144.447 1.00 38.64 C
ATOM 24 P C B2524 66.973 133.730 147.066 1.00 40.39 P
ATOM 25 OP1 C B2524 67.487 132.386 147.424 1.00 40.58 O
ATOM 26 OP2 C B2524 65.920 134.359 147.896 1.00 38.61 O
ATOM 27 O5' C B2524 68.213 134.728 147.010 1.00 39.44 O
TER
Atoms:
OP1: (54.566,130.240,150.452)
OP2: (52.532,129.438,149.088)
C3': (55.204,130.837,144.289)
C1': (57.461,130.526,144.955)
C5': (54.269,130.283,146.625)
O4': (56.585,130.259,146.029)
C8: (59.528,129.139,144.532)
O2': (56.880,132.556,143.896)
C6: (58.442,125.951,143.521)
C5: (58.718,127.264,143.942)
C4: (57.634,128.083,144.214)
P: (54.000,129.690,149.192)
C4': (55.335,130.946,145.794)
C2': (56.627,131.170,143.846)
C2: (56.203,126.492,143.716)
N1: (57.147,125.590,143.415)
N3: (56.337,127.752,144.120)
N6: (59.385,125.051,143.222)
N7: (59.910,127.943,144.150)
N9: (58.166,129.298,144.586)
O5': (54.445,130.651,148.006)
O3': (54.300,131.815,143.780)
OP2: (52.532,129.438,149.088)
C3': (55.204,130.837,144.289)
C1': (57.461,130.526,144.955)
C5': (54.269,130.283,146.625)
O4': (56.585,130.259,146.029)
C8: (59.528,129.139,144.532)
O2': (56.880,132.556,143.896)
C6: (58.442,125.951,143.521)
C5: (58.718,127.264,143.942)
C4: (57.634,128.083,144.214)
P: (54.000,129.690,149.192)
C4': (55.335,130.946,145.794)
C2': (56.627,131.170,143.846)
C2: (56.203,126.492,143.716)
N1: (57.147,125.590,143.415)
N3: (56.337,127.752,144.120)
N6: (59.385,125.051,143.222)
N7: (59.910,127.943,144.150)
N9: (58.166,129.298,144.586)
O5': (54.445,130.651,148.006)
O3': (54.300,131.815,143.780)
OP1: (61.422,132.290,144.517)
OP2: (60.516,134.459,145.517)
C3': (65.748,134.773,144.994)
C1': (65.868,136.641,143.568)
C5': (63.786,133.667,143.673)
O4': (64.885,135.743,143.074)
C8: (63.938,137.835,144.751)
O2': (67.830,135.333,143.866)
C6: (65.171,141.028,145.509)
C5: (64.821,139.728,145.133)
C4: (65.770,138.998,144.447)
P: (61.286,133.762,144.465)
C4': (65.087,134.438,143.669)
C2': (66.721,135.859,144.563)
C2: (67.214,140.649,144.494)
N1: (66.398,141.471,145.166)
N3: (67.001,139.405,144.090)
N6: (64.362,141.843,146.185)
N7: (63.665,138.986,145.312)
N9: (65.203,137.768,144.220)
O5': (62.749,134.388,144.359)
O3': (66.444,133.661,145.549)
OP2: (60.516,134.459,145.517)
C3': (65.748,134.773,144.994)
C1': (65.868,136.641,143.568)
C5': (63.786,133.667,143.673)
O4': (64.885,135.743,143.074)
C8: (63.938,137.835,144.751)
O2': (67.830,135.333,143.866)
C6: (65.171,141.028,145.509)
C5: (64.821,139.728,145.133)
C4: (65.770,138.998,144.447)
P: (61.286,133.762,144.465)
C4': (65.087,134.438,143.669)
C2': (66.721,135.859,144.563)
C2: (67.214,140.649,144.494)
N1: (66.398,141.471,145.166)
N3: (67.001,139.405,144.090)
N6: (64.362,141.843,146.185)
N7: (63.665,138.986,145.312)
N9: (65.203,137.768,144.220)
O5': (62.749,134.388,144.359)
O3': (66.444,133.661,145.549)
Image (generated by PyMOL):