Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1972:A1973
Extra
PDB:
ATOM 1 O3' U A1971 -11.181 109.592 134.773 1.00 3.51 O
ATOM 2 P G A1972 -11.928 108.772 135.925 1.00 2.95 P
ATOM 3 OP1 G A1972 -10.905 108.516 136.998 1.00 2.95 O
ATOM 4 OP2 G A1972 -12.597 107.601 135.270 1.00 2.95 O
ATOM 5 O5' G A1972 -13.030 109.819 136.429 1.00 2.95 O
ATOM 6 C5' G A1972 -12.732 111.205 136.524 1.00 2.95 C
ATOM 7 C4' G A1972 -13.842 111.959 137.201 1.00 2.95 C
ATOM 8 O4' G A1972 -14.940 112.102 136.271 1.00 2.95 O
ATOM 9 C3' G A1972 -14.424 111.274 138.436 1.00 2.95 C
ATOM 10 O3' G A1972 -14.906 112.250 139.349 1.00 2.95 O
ATOM 11 C2' G A1972 -15.600 110.507 137.877 1.00 2.95 C
ATOM 12 O2' G A1972 -16.611 110.243 138.822 1.00 2.95 O
ATOM 13 C1' G A1972 -16.091 111.457 136.792 1.00 2.95 C
ATOM 14 N9 G A1972 -16.764 110.787 135.699 1.00 2.80 N
ATOM 15 C8 G A1972 -16.311 109.701 135.016 1.00 2.80 C
ATOM 16 N7 G A1972 -17.132 109.335 134.077 1.00 2.80 N
ATOM 17 C5 G A1972 -18.177 110.243 134.166 1.00 2.80 C
ATOM 18 C6 G A1972 -19.354 110.344 133.404 1.00 2.80 C
ATOM 19 O6 G A1972 -19.728 109.623 132.483 1.00 2.80 O
ATOM 20 N1 G A1972 -20.122 111.405 133.826 1.00 2.80 N
ATOM 21 C2 G A1972 -19.796 112.247 134.846 1.00 2.80 C
ATOM 22 N2 G A1972 -20.679 113.204 135.100 1.00 2.80 N
ATOM 23 N3 G A1972 -18.709 112.180 135.581 1.00 2.80 N
ATOM 24 C4 G A1972 -17.957 111.148 135.171 1.00 2.80 C
ATOM 25 P A A1973 -14.030 112.653 140.616 1.00 3.08 P
ATOM 26 OP1 A A1973 -14.166 114.128 140.786 1.00 3.08 O
ATOM 27 OP2 A A1973 -12.674 112.086 140.405 1.00 3.08 O
ATOM 28 O5' A A1973 -14.756 111.879 141.811 1.00 3.08 O
TER
ATOM 1 O3' G B1972 -14.906 112.250 139.349 1.00 2.95 O
ATOM 2 P A B1973 -14.030 112.653 140.616 1.00 3.08 P
ATOM 3 OP1 A B1973 -14.166 114.128 140.786 1.00 3.08 O
ATOM 4 OP2 A B1973 -12.674 112.086 140.405 1.00 3.08 O
ATOM 5 O5' A B1973 -14.756 111.879 141.811 1.00 3.08 O
ATOM 6 C5' A B1973 -14.486 110.511 142.070 1.00 3.08 C
ATOM 7 C4' A B1973 -15.143 110.063 143.354 1.00 3.08 C
ATOM 8 O4' A B1973 -14.377 110.536 144.495 1.00 3.08 O
ATOM 9 C3' A B1973 -16.557 110.583 143.594 1.00 3.08 C
ATOM 10 O3' A B1973 -17.537 109.741 143.039 1.00 3.08 O
ATOM 11 C2' A B1973 -16.643 110.638 145.107 1.00 3.08 C
ATOM 12 O2' A B1973 -16.891 109.350 145.641 1.00 3.08 O
ATOM 13 C1' A B1973 -15.237 111.047 145.480 1.00 3.08 C
ATOM 14 N9 A B1973 -15.095 112.497 145.483 1.00 3.00 N
ATOM 15 C8 A B1973 -15.901 113.422 144.895 1.00 3.00 C
ATOM 16 N7 A B1973 -15.475 114.645 145.088 1.00 3.00 N
ATOM 17 C5 A B1973 -14.313 114.498 145.825 1.00 3.00 C
ATOM 18 C6 A B1973 -13.383 115.397 146.337 1.00 3.00 C
ATOM 19 N6 A B1973 -13.407 116.724 146.218 1.00 3.00 N
ATOM 20 N1 A B1973 -12.373 114.875 147.017 1.00 3.00 N
ATOM 21 C2 A B1973 -12.305 113.563 147.173 1.00 3.00 C
ATOM 22 N3 A B1973 -13.099 112.611 146.736 1.00 3.00 N
ATOM 23 C4 A B1973 -14.087 113.172 146.070 1.00 3.00 C
ATOM 24 P U B1974 -18.185 110.045 141.612 1.00 0.01 P
ATOM 25 OP1 U B1974 -18.033 108.816 140.811 1.00 0.01 O
ATOM 26 OP2 U B1974 -17.589 111.324 141.108 1.00 0.01 O
ATOM 27 O5' U B1974 -19.712 110.259 141.959 1.00 0.01 O
TER
ATOM 2 P G A1972 -11.928 108.772 135.925 1.00 2.95 P
ATOM 3 OP1 G A1972 -10.905 108.516 136.998 1.00 2.95 O
ATOM 4 OP2 G A1972 -12.597 107.601 135.270 1.00 2.95 O
ATOM 5 O5' G A1972 -13.030 109.819 136.429 1.00 2.95 O
ATOM 6 C5' G A1972 -12.732 111.205 136.524 1.00 2.95 C
ATOM 7 C4' G A1972 -13.842 111.959 137.201 1.00 2.95 C
ATOM 8 O4' G A1972 -14.940 112.102 136.271 1.00 2.95 O
ATOM 9 C3' G A1972 -14.424 111.274 138.436 1.00 2.95 C
ATOM 10 O3' G A1972 -14.906 112.250 139.349 1.00 2.95 O
ATOM 11 C2' G A1972 -15.600 110.507 137.877 1.00 2.95 C
ATOM 12 O2' G A1972 -16.611 110.243 138.822 1.00 2.95 O
ATOM 13 C1' G A1972 -16.091 111.457 136.792 1.00 2.95 C
ATOM 14 N9 G A1972 -16.764 110.787 135.699 1.00 2.80 N
ATOM 15 C8 G A1972 -16.311 109.701 135.016 1.00 2.80 C
ATOM 16 N7 G A1972 -17.132 109.335 134.077 1.00 2.80 N
ATOM 17 C5 G A1972 -18.177 110.243 134.166 1.00 2.80 C
ATOM 18 C6 G A1972 -19.354 110.344 133.404 1.00 2.80 C
ATOM 19 O6 G A1972 -19.728 109.623 132.483 1.00 2.80 O
ATOM 20 N1 G A1972 -20.122 111.405 133.826 1.00 2.80 N
ATOM 21 C2 G A1972 -19.796 112.247 134.846 1.00 2.80 C
ATOM 22 N2 G A1972 -20.679 113.204 135.100 1.00 2.80 N
ATOM 23 N3 G A1972 -18.709 112.180 135.581 1.00 2.80 N
ATOM 24 C4 G A1972 -17.957 111.148 135.171 1.00 2.80 C
ATOM 25 P A A1973 -14.030 112.653 140.616 1.00 3.08 P
ATOM 26 OP1 A A1973 -14.166 114.128 140.786 1.00 3.08 O
ATOM 27 OP2 A A1973 -12.674 112.086 140.405 1.00 3.08 O
ATOM 28 O5' A A1973 -14.756 111.879 141.811 1.00 3.08 O
TER
ATOM 1 O3' G B1972 -14.906 112.250 139.349 1.00 2.95 O
ATOM 2 P A B1973 -14.030 112.653 140.616 1.00 3.08 P
ATOM 3 OP1 A B1973 -14.166 114.128 140.786 1.00 3.08 O
ATOM 4 OP2 A B1973 -12.674 112.086 140.405 1.00 3.08 O
ATOM 5 O5' A B1973 -14.756 111.879 141.811 1.00 3.08 O
ATOM 6 C5' A B1973 -14.486 110.511 142.070 1.00 3.08 C
ATOM 7 C4' A B1973 -15.143 110.063 143.354 1.00 3.08 C
ATOM 8 O4' A B1973 -14.377 110.536 144.495 1.00 3.08 O
ATOM 9 C3' A B1973 -16.557 110.583 143.594 1.00 3.08 C
ATOM 10 O3' A B1973 -17.537 109.741 143.039 1.00 3.08 O
ATOM 11 C2' A B1973 -16.643 110.638 145.107 1.00 3.08 C
ATOM 12 O2' A B1973 -16.891 109.350 145.641 1.00 3.08 O
ATOM 13 C1' A B1973 -15.237 111.047 145.480 1.00 3.08 C
ATOM 14 N9 A B1973 -15.095 112.497 145.483 1.00 3.00 N
ATOM 15 C8 A B1973 -15.901 113.422 144.895 1.00 3.00 C
ATOM 16 N7 A B1973 -15.475 114.645 145.088 1.00 3.00 N
ATOM 17 C5 A B1973 -14.313 114.498 145.825 1.00 3.00 C
ATOM 18 C6 A B1973 -13.383 115.397 146.337 1.00 3.00 C
ATOM 19 N6 A B1973 -13.407 116.724 146.218 1.00 3.00 N
ATOM 20 N1 A B1973 -12.373 114.875 147.017 1.00 3.00 N
ATOM 21 C2 A B1973 -12.305 113.563 147.173 1.00 3.00 C
ATOM 22 N3 A B1973 -13.099 112.611 146.736 1.00 3.00 N
ATOM 23 C4 A B1973 -14.087 113.172 146.070 1.00 3.00 C
ATOM 24 P U B1974 -18.185 110.045 141.612 1.00 0.01 P
ATOM 25 OP1 U B1974 -18.033 108.816 140.811 1.00 0.01 O
ATOM 26 OP2 U B1974 -17.589 111.324 141.108 1.00 0.01 O
ATOM 27 O5' U B1974 -19.712 110.259 141.959 1.00 0.01 O
TER
Atoms:
OP1: (-10.905,108.516,136.998)
OP2: (-12.597,107.601,135.270)
C3': (-14.424,111.274,138.436)
C1': (-16.091,111.457,136.792)
C5': (-12.732,111.205,136.524)
O6: (-19.728,109.623,132.483)
O4': (-14.940,112.102,136.271)
C8: (-16.311,109.701,135.016)
C2: (-19.796,112.247,134.846)
C6: (-19.354,110.344,133.404)
C5: (-18.177,110.243,134.166)
C4: (-17.957,111.148,135.171)
P: (-11.928,108.772,135.925)
C4': (-13.842,111.959,137.201)
C2': (-15.600,110.507,137.877)
O2': (-16.611,110.243,138.822)
N1: (-20.122,111.405,133.826)
N2: (-20.679,113.204,135.100)
N3: (-18.709,112.180,135.581)
N7: (-17.132,109.335,134.077)
N9: (-16.764,110.787,135.699)
O5': (-13.030,109.819,136.429)
O3': (-14.906,112.250,139.349)
OP2: (-12.597,107.601,135.270)
C3': (-14.424,111.274,138.436)
C1': (-16.091,111.457,136.792)
C5': (-12.732,111.205,136.524)
O6: (-19.728,109.623,132.483)
O4': (-14.940,112.102,136.271)
C8: (-16.311,109.701,135.016)
C2: (-19.796,112.247,134.846)
C6: (-19.354,110.344,133.404)
C5: (-18.177,110.243,134.166)
C4: (-17.957,111.148,135.171)
P: (-11.928,108.772,135.925)
C4': (-13.842,111.959,137.201)
C2': (-15.600,110.507,137.877)
O2': (-16.611,110.243,138.822)
N1: (-20.122,111.405,133.826)
N2: (-20.679,113.204,135.100)
N3: (-18.709,112.180,135.581)
N7: (-17.132,109.335,134.077)
N9: (-16.764,110.787,135.699)
O5': (-13.030,109.819,136.429)
O3': (-14.906,112.250,139.349)
OP1: (-14.166,114.128,140.786)
OP2: (-12.674,112.086,140.405)
C3': (-16.557,110.583,143.594)
C1': (-15.237,111.047,145.480)
C5': (-14.486,110.511,142.070)
O4': (-14.377,110.536,144.495)
C8: (-15.901,113.422,144.895)
O2': (-16.891,109.350,145.641)
C6: (-13.383,115.397,146.337)
C5: (-14.313,114.498,145.825)
C4: (-14.087,113.172,146.070)
P: (-14.030,112.653,140.616)
C4': (-15.143,110.063,143.354)
C2': (-16.643,110.638,145.107)
C2: (-12.305,113.563,147.173)
N1: (-12.373,114.875,147.017)
N3: (-13.099,112.611,146.736)
N6: (-13.407,116.724,146.218)
N7: (-15.475,114.645,145.088)
N9: (-15.095,112.497,145.483)
O5': (-14.756,111.879,141.811)
O3': (-17.537,109.741,143.039)
OP2: (-12.674,112.086,140.405)
C3': (-16.557,110.583,143.594)
C1': (-15.237,111.047,145.480)
C5': (-14.486,110.511,142.070)
O4': (-14.377,110.536,144.495)
C8: (-15.901,113.422,144.895)
O2': (-16.891,109.350,145.641)
C6: (-13.383,115.397,146.337)
C5: (-14.313,114.498,145.825)
C4: (-14.087,113.172,146.070)
P: (-14.030,112.653,140.616)
C4': (-15.143,110.063,143.354)
C2': (-16.643,110.638,145.107)
C2: (-12.305,113.563,147.173)
N1: (-12.373,114.875,147.017)
N3: (-13.099,112.611,146.736)
N6: (-13.407,116.724,146.218)
N7: (-15.475,114.645,145.088)
N9: (-15.095,112.497,145.483)
O5': (-14.756,111.879,141.811)
O3': (-17.537,109.741,143.039)
Image (generated by PyMOL):