Doublet info:
Details
Nucleotide types:
GA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12130:12131
Extra
PDB:
ATOM 1 O3' C A2129 -3.317 24.149 91.789 1.00 43.85 O
ATOM 2 P G A2130 -2.627 24.582 90.406 1.00 48.42 P
ATOM 3 OP1 G A2130 -1.726 25.673 90.712 1.00 48.54 O
ATOM 4 OP2 G A2130 -3.710 24.829 89.424 1.00 48.57 O
ATOM 5 O5' G A2130 -1.794 23.289 89.989 1.00 47.90 O
ATOM 6 C5' G A2130 -0.697 22.844 90.761 1.00 47.69 C
ATOM 7 C4' G A2130 0.146 21.861 90.004 1.00 47.22 C
ATOM 8 O4' G A2130 -0.676 20.745 89.602 1.00 47.08 O
ATOM 9 C3' G A2130 0.782 22.403 88.718 1.00 47.05 C
ATOM 10 O3' G A2130 2.066 21.789 88.500 1.00 46.65 O
ATOM 11 C2' G A2130 -0.157 21.886 87.656 1.00 46.98 C
ATOM 12 O2' G A2130 0.439 21.748 86.402 1.00 46.69 O
ATOM 13 C1' G A2130 -0.542 20.535 88.226 1.00 46.84 C
ATOM 14 N9 G A2130 -1.809 20.003 87.703 1.00 46.91 N
ATOM 15 C8 G A2130 -3.024 20.666 87.638 1.00 47.28 C
ATOM 16 N7 G A2130 -3.976 19.964 87.095 1.00 47.27 N
ATOM 17 C5 G A2130 -3.382 18.758 86.766 1.00 46.87 C
ATOM 18 C6 G A2130 -3.913 17.586 86.165 1.00 46.69 C
ATOM 19 O6 G A2130 -5.032 17.288 85.749 1.00 46.83 O
ATOM 20 N1 G A2130 -2.960 16.615 86.045 1.00 46.30 N
ATOM 21 C2 G A2130 -1.665 16.708 86.411 1.00 46.10 C
ATOM 22 N2 G A2130 -0.975 15.604 86.124 1.00 45.74 N
ATOM 23 N3 G A2130 -1.141 17.767 86.966 1.00 46.26 N
ATOM 24 C4 G A2130 -2.041 18.756 87.126 1.00 46.64 C
ATOM 25 P A A2131 3.388 22.191 89.360 1.00 48.31 P
ATOM 26 OP1 A A2131 4.034 20.913 89.765 1.00 47.98 O
ATOM 27 OP2 A A2131 2.982 23.182 90.428 1.00 48.74 O
ATOM 28 O5' A A2131 4.282 22.927 88.270 1.00 48.17 O
TER
ATOM 1 O3' G B2130 2.066 21.789 88.500 1.00 46.65 O
ATOM 2 P A B2131 3.388 22.191 89.360 1.00 48.31 P
ATOM 3 OP1 A B2131 4.034 20.913 89.765 1.00 47.98 O
ATOM 4 OP2 A B2131 2.982 23.182 90.428 1.00 48.74 O
ATOM 5 O5' A B2131 4.282 22.927 88.270 1.00 48.17 O
ATOM 6 C5' A B2131 3.782 24.009 87.511 1.00 48.41 C
ATOM 7 C4' A B2131 4.696 24.278 86.357 1.00 48.17 C
ATOM 8 O4' A B2131 5.977 24.724 86.848 1.00 48.12 O
ATOM 9 C3' A B2131 4.991 23.080 85.501 1.00 47.76 C
ATOM 10 O3' A B2131 4.063 22.973 84.459 1.00 47.78 O
ATOM 11 C2' A B2131 6.393 23.339 84.998 1.00 47.53 C
ATOM 12 O2' A B2131 6.331 24.187 83.869 1.00 47.61 O
ATOM 13 C1' A B2131 7.017 24.123 86.146 1.00 47.73 C
ATOM 14 N9 A B2131 7.752 23.288 87.113 1.00 47.55 N
ATOM 15 C8 A B2131 7.506 22.005 87.504 1.00 47.35 C
ATOM 16 N7 A B2131 8.277 21.563 88.475 1.00 47.27 N
ATOM 17 C5 A B2131 9.061 22.660 88.769 1.00 47.42 C
ATOM 18 C6 A B2131 10.060 22.816 89.717 1.00 47.44 C
ATOM 19 N6 A B2131 10.434 21.824 90.524 1.00 47.29 N
ATOM 20 N1 A B2131 10.660 24.020 89.771 1.00 47.63 N
ATOM 21 C2 A B2131 10.279 24.967 88.913 1.00 47.78 C
ATOM 22 N3 A B2131 9.349 24.926 87.982 1.00 47.78 N
ATOM 23 C4 A B2131 8.758 23.725 87.957 1.00 47.60 C
ATOM 24 P G B2132 2.945 21.836 84.472 1.00 45.84 P
ATOM 25 OP1 G B2132 1.709 22.462 83.915 1.00 46.15 O
ATOM 26 OP2 G B2132 2.924 21.231 85.845 1.00 45.86 O
ATOM 27 O5' G B2132 3.524 20.761 83.443 1.00 45.42 O
TER
ATOM 2 P G A2130 -2.627 24.582 90.406 1.00 48.42 P
ATOM 3 OP1 G A2130 -1.726 25.673 90.712 1.00 48.54 O
ATOM 4 OP2 G A2130 -3.710 24.829 89.424 1.00 48.57 O
ATOM 5 O5' G A2130 -1.794 23.289 89.989 1.00 47.90 O
ATOM 6 C5' G A2130 -0.697 22.844 90.761 1.00 47.69 C
ATOM 7 C4' G A2130 0.146 21.861 90.004 1.00 47.22 C
ATOM 8 O4' G A2130 -0.676 20.745 89.602 1.00 47.08 O
ATOM 9 C3' G A2130 0.782 22.403 88.718 1.00 47.05 C
ATOM 10 O3' G A2130 2.066 21.789 88.500 1.00 46.65 O
ATOM 11 C2' G A2130 -0.157 21.886 87.656 1.00 46.98 C
ATOM 12 O2' G A2130 0.439 21.748 86.402 1.00 46.69 O
ATOM 13 C1' G A2130 -0.542 20.535 88.226 1.00 46.84 C
ATOM 14 N9 G A2130 -1.809 20.003 87.703 1.00 46.91 N
ATOM 15 C8 G A2130 -3.024 20.666 87.638 1.00 47.28 C
ATOM 16 N7 G A2130 -3.976 19.964 87.095 1.00 47.27 N
ATOM 17 C5 G A2130 -3.382 18.758 86.766 1.00 46.87 C
ATOM 18 C6 G A2130 -3.913 17.586 86.165 1.00 46.69 C
ATOM 19 O6 G A2130 -5.032 17.288 85.749 1.00 46.83 O
ATOM 20 N1 G A2130 -2.960 16.615 86.045 1.00 46.30 N
ATOM 21 C2 G A2130 -1.665 16.708 86.411 1.00 46.10 C
ATOM 22 N2 G A2130 -0.975 15.604 86.124 1.00 45.74 N
ATOM 23 N3 G A2130 -1.141 17.767 86.966 1.00 46.26 N
ATOM 24 C4 G A2130 -2.041 18.756 87.126 1.00 46.64 C
ATOM 25 P A A2131 3.388 22.191 89.360 1.00 48.31 P
ATOM 26 OP1 A A2131 4.034 20.913 89.765 1.00 47.98 O
ATOM 27 OP2 A A2131 2.982 23.182 90.428 1.00 48.74 O
ATOM 28 O5' A A2131 4.282 22.927 88.270 1.00 48.17 O
TER
ATOM 1 O3' G B2130 2.066 21.789 88.500 1.00 46.65 O
ATOM 2 P A B2131 3.388 22.191 89.360 1.00 48.31 P
ATOM 3 OP1 A B2131 4.034 20.913 89.765 1.00 47.98 O
ATOM 4 OP2 A B2131 2.982 23.182 90.428 1.00 48.74 O
ATOM 5 O5' A B2131 4.282 22.927 88.270 1.00 48.17 O
ATOM 6 C5' A B2131 3.782 24.009 87.511 1.00 48.41 C
ATOM 7 C4' A B2131 4.696 24.278 86.357 1.00 48.17 C
ATOM 8 O4' A B2131 5.977 24.724 86.848 1.00 48.12 O
ATOM 9 C3' A B2131 4.991 23.080 85.501 1.00 47.76 C
ATOM 10 O3' A B2131 4.063 22.973 84.459 1.00 47.78 O
ATOM 11 C2' A B2131 6.393 23.339 84.998 1.00 47.53 C
ATOM 12 O2' A B2131 6.331 24.187 83.869 1.00 47.61 O
ATOM 13 C1' A B2131 7.017 24.123 86.146 1.00 47.73 C
ATOM 14 N9 A B2131 7.752 23.288 87.113 1.00 47.55 N
ATOM 15 C8 A B2131 7.506 22.005 87.504 1.00 47.35 C
ATOM 16 N7 A B2131 8.277 21.563 88.475 1.00 47.27 N
ATOM 17 C5 A B2131 9.061 22.660 88.769 1.00 47.42 C
ATOM 18 C6 A B2131 10.060 22.816 89.717 1.00 47.44 C
ATOM 19 N6 A B2131 10.434 21.824 90.524 1.00 47.29 N
ATOM 20 N1 A B2131 10.660 24.020 89.771 1.00 47.63 N
ATOM 21 C2 A B2131 10.279 24.967 88.913 1.00 47.78 C
ATOM 22 N3 A B2131 9.349 24.926 87.982 1.00 47.78 N
ATOM 23 C4 A B2131 8.758 23.725 87.957 1.00 47.60 C
ATOM 24 P G B2132 2.945 21.836 84.472 1.00 45.84 P
ATOM 25 OP1 G B2132 1.709 22.462 83.915 1.00 46.15 O
ATOM 26 OP2 G B2132 2.924 21.231 85.845 1.00 45.86 O
ATOM 27 O5' G B2132 3.524 20.761 83.443 1.00 45.42 O
TER
Atoms:
OP1: (-1.726,25.673,90.712)
OP2: (-3.710,24.829,89.424)
C3': (0.782,22.403,88.718)
C1': (-0.542,20.535,88.226)
C5': (-0.697,22.844,90.761)
O6: (-5.032,17.288,85.749)
O4': (-0.676,20.745,89.602)
C8: (-3.024,20.666,87.638)
C2: (-1.665,16.708,86.411)
C6: (-3.913,17.586,86.165)
C5: (-3.382,18.758,86.766)
C4: (-2.041,18.756,87.126)
P: (-2.627,24.582,90.406)
C4': (0.146,21.861,90.004)
C2': (-0.157,21.886,87.656)
O2': (0.439,21.748,86.402)
N1: (-2.960,16.615,86.045)
N2: (-0.975,15.604,86.124)
N3: (-1.141,17.767,86.966)
N7: (-3.976,19.964,87.095)
N9: (-1.809,20.003,87.703)
O5': (-1.794,23.289,89.989)
O3': (2.066,21.789,88.500)
OP2: (-3.710,24.829,89.424)
C3': (0.782,22.403,88.718)
C1': (-0.542,20.535,88.226)
C5': (-0.697,22.844,90.761)
O6: (-5.032,17.288,85.749)
O4': (-0.676,20.745,89.602)
C8: (-3.024,20.666,87.638)
C2: (-1.665,16.708,86.411)
C6: (-3.913,17.586,86.165)
C5: (-3.382,18.758,86.766)
C4: (-2.041,18.756,87.126)
P: (-2.627,24.582,90.406)
C4': (0.146,21.861,90.004)
C2': (-0.157,21.886,87.656)
O2': (0.439,21.748,86.402)
N1: (-2.960,16.615,86.045)
N2: (-0.975,15.604,86.124)
N3: (-1.141,17.767,86.966)
N7: (-3.976,19.964,87.095)
N9: (-1.809,20.003,87.703)
O5': (-1.794,23.289,89.989)
O3': (2.066,21.789,88.500)
OP1: (4.034,20.913,89.765)
OP2: (2.982,23.182,90.428)
C3': (4.991,23.080,85.501)
C1': (7.017,24.123,86.146)
C5': (3.782,24.009,87.511)
O4': (5.977,24.724,86.848)
C8: (7.506,22.005,87.504)
O2': (6.331,24.187,83.869)
C6: (10.060,22.816,89.717)
C5: (9.061,22.660,88.769)
C4: (8.758,23.725,87.957)
P: (3.388,22.191,89.360)
C4': (4.696,24.278,86.357)
C2': (6.393,23.339,84.998)
C2: (10.279,24.967,88.913)
N1: (10.660,24.020,89.771)
N3: (9.349,24.926,87.982)
N6: (10.434,21.824,90.524)
N7: (8.277,21.563,88.475)
N9: (7.752,23.288,87.113)
O5': (4.282,22.927,88.270)
O3': (4.063,22.973,84.459)
OP2: (2.982,23.182,90.428)
C3': (4.991,23.080,85.501)
C1': (7.017,24.123,86.146)
C5': (3.782,24.009,87.511)
O4': (5.977,24.724,86.848)
C8: (7.506,22.005,87.504)
O2': (6.331,24.187,83.869)
C6: (10.060,22.816,89.717)
C5: (9.061,22.660,88.769)
C4: (8.758,23.725,87.957)
P: (3.388,22.191,89.360)
C4': (4.696,24.278,86.357)
C2': (6.393,23.339,84.998)
C2: (10.279,24.967,88.913)
N1: (10.660,24.020,89.771)
N3: (9.349,24.926,87.982)
N6: (10.434,21.824,90.524)
N7: (8.277,21.563,88.475)
N9: (7.752,23.288,87.113)
O5': (4.282,22.927,88.270)
O3': (4.063,22.973,84.459)
Image (generated by PyMOL):