Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0104:0103
Extra
PDB:
ATOM 1 O3' A A 103 78.157 141.444 35.766 1.00 32.60 O
ATOM 2 P A A 104 79.645 141.941 35.410 1.00 36.00 P
ATOM 3 OP1 A A 104 80.267 140.988 34.444 1.00 33.09 O
ATOM 4 OP2 A A 104 80.343 142.245 36.683 1.00 35.45 O
ATOM 5 O5' A A 104 79.405 143.311 34.639 1.00 34.30 O
ATOM 6 C5' A A 104 79.063 144.519 35.335 1.00 32.91 C
ATOM 7 C4' A A 104 79.022 145.663 34.356 1.00 33.04 C
ATOM 8 O4' A A 104 77.891 145.481 33.460 1.00 33.02 O
ATOM 9 C3' A A 104 78.878 147.061 34.949 1.00 34.01 C
ATOM 10 O3' A A 104 79.557 147.999 34.112 1.00 35.82 O
ATOM 11 C2' A A 104 77.384 147.313 34.802 1.00 35.13 C
ATOM 12 O2' A A 104 77.035 148.680 34.758 1.00 36.18 O
ATOM 13 C1' A A 104 77.121 146.659 33.452 1.00 34.89 C
ATOM 14 N9 A A 104 75.721 146.332 33.190 1.00 35.15 N
ATOM 15 C8 A A 104 74.902 145.438 33.820 1.00 36.06 C
ATOM 16 N7 A A 104 73.674 145.431 33.358 1.00 38.98 N
ATOM 17 C5 A A 104 73.692 146.378 32.346 1.00 37.69 C
ATOM 18 C6 A A 104 72.695 146.856 31.464 1.00 38.22 C
ATOM 19 N6 A A 104 71.433 146.422 31.449 1.00 37.72 N
ATOM 20 N1 A A 104 73.049 147.811 30.582 1.00 39.98 N
ATOM 21 C2 A A 104 74.316 148.246 30.583 1.00 39.99 C
ATOM 22 N3 A A 104 75.337 147.873 31.349 1.00 37.97 N
ATOM 23 C4 A A 104 74.951 146.930 32.223 1.00 37.03 C
ATOM 24 P U A 105 81.166 148.064 34.095 1.00 37.21 P
ATOM 25 OP1 U A 105 81.758 146.770 34.528 1.00 36.92 O
ATOM 26 OP2 U A 105 81.568 149.315 34.777 1.00 37.33 O
ATOM 27 O5' U A 105 81.473 148.231 32.544 1.00 40.11 O
TER
ATOM 1 O3' G B 102 74.594 145.123 38.277 1.00 31.95 O
ATOM 2 P A B 103 75.983 144.544 37.742 1.00 34.42 P
ATOM 3 OP1 A B 103 76.504 143.635 38.790 1.00 32.04 O
ATOM 4 OP2 A B 103 76.818 145.671 37.277 1.00 33.94 O
ATOM 5 O5' A B 103 75.575 143.662 36.481 1.00 35.45 O
ATOM 6 C5' A B 103 75.210 142.283 36.651 1.00 35.71 C
ATOM 7 C4' A B 103 75.730 141.443 35.509 1.00 34.92 C
ATOM 8 O4' A B 103 74.867 141.557 34.350 1.00 35.80 O
ATOM 9 C3' A B 103 77.075 141.829 34.933 1.00 34.06 C
ATOM 10 O3' A B 103 78.157 141.444 35.766 1.00 32.60 O
ATOM 11 C2' A B 103 77.077 141.068 33.609 1.00 34.82 C
ATOM 12 O2' A B 103 77.487 139.728 33.783 1.00 31.25 O
ATOM 13 C1' A B 103 75.592 141.127 33.209 1.00 36.56 C
ATOM 14 N9 A B 103 75.247 141.997 32.079 1.00 39.88 N
ATOM 15 C8 A B 103 75.895 143.122 31.629 1.00 40.26 C
ATOM 16 N7 A B 103 75.327 143.677 30.584 1.00 40.32 N
ATOM 17 C5 A B 103 74.232 142.865 30.327 1.00 40.78 C
ATOM 18 C6 A B 103 73.228 142.908 29.339 1.00 40.99 C
ATOM 19 N6 A B 103 73.155 143.842 28.388 1.00 40.78 N
ATOM 20 N1 A B 103 72.286 141.944 29.360 1.00 40.38 N
ATOM 21 C2 A B 103 72.353 141.008 30.303 1.00 40.63 C
ATOM 22 N3 A B 103 73.243 140.856 31.281 1.00 42.47 N
ATOM 23 C4 A B 103 74.169 141.828 31.238 1.00 41.27 C
ATOM 24 P A B 104 79.645 141.941 35.410 1.00 36.00 P
ATOM 25 OP1 A B 104 80.267 140.988 34.444 1.00 33.09 O
ATOM 26 OP2 A B 104 80.343 142.245 36.683 1.00 35.45 O
ATOM 27 O5' A B 104 79.405 143.311 34.639 1.00 34.30 O
TER
ATOM 2 P A A 104 79.645 141.941 35.410 1.00 36.00 P
ATOM 3 OP1 A A 104 80.267 140.988 34.444 1.00 33.09 O
ATOM 4 OP2 A A 104 80.343 142.245 36.683 1.00 35.45 O
ATOM 5 O5' A A 104 79.405 143.311 34.639 1.00 34.30 O
ATOM 6 C5' A A 104 79.063 144.519 35.335 1.00 32.91 C
ATOM 7 C4' A A 104 79.022 145.663 34.356 1.00 33.04 C
ATOM 8 O4' A A 104 77.891 145.481 33.460 1.00 33.02 O
ATOM 9 C3' A A 104 78.878 147.061 34.949 1.00 34.01 C
ATOM 10 O3' A A 104 79.557 147.999 34.112 1.00 35.82 O
ATOM 11 C2' A A 104 77.384 147.313 34.802 1.00 35.13 C
ATOM 12 O2' A A 104 77.035 148.680 34.758 1.00 36.18 O
ATOM 13 C1' A A 104 77.121 146.659 33.452 1.00 34.89 C
ATOM 14 N9 A A 104 75.721 146.332 33.190 1.00 35.15 N
ATOM 15 C8 A A 104 74.902 145.438 33.820 1.00 36.06 C
ATOM 16 N7 A A 104 73.674 145.431 33.358 1.00 38.98 N
ATOM 17 C5 A A 104 73.692 146.378 32.346 1.00 37.69 C
ATOM 18 C6 A A 104 72.695 146.856 31.464 1.00 38.22 C
ATOM 19 N6 A A 104 71.433 146.422 31.449 1.00 37.72 N
ATOM 20 N1 A A 104 73.049 147.811 30.582 1.00 39.98 N
ATOM 21 C2 A A 104 74.316 148.246 30.583 1.00 39.99 C
ATOM 22 N3 A A 104 75.337 147.873 31.349 1.00 37.97 N
ATOM 23 C4 A A 104 74.951 146.930 32.223 1.00 37.03 C
ATOM 24 P U A 105 81.166 148.064 34.095 1.00 37.21 P
ATOM 25 OP1 U A 105 81.758 146.770 34.528 1.00 36.92 O
ATOM 26 OP2 U A 105 81.568 149.315 34.777 1.00 37.33 O
ATOM 27 O5' U A 105 81.473 148.231 32.544 1.00 40.11 O
TER
ATOM 1 O3' G B 102 74.594 145.123 38.277 1.00 31.95 O
ATOM 2 P A B 103 75.983 144.544 37.742 1.00 34.42 P
ATOM 3 OP1 A B 103 76.504 143.635 38.790 1.00 32.04 O
ATOM 4 OP2 A B 103 76.818 145.671 37.277 1.00 33.94 O
ATOM 5 O5' A B 103 75.575 143.662 36.481 1.00 35.45 O
ATOM 6 C5' A B 103 75.210 142.283 36.651 1.00 35.71 C
ATOM 7 C4' A B 103 75.730 141.443 35.509 1.00 34.92 C
ATOM 8 O4' A B 103 74.867 141.557 34.350 1.00 35.80 O
ATOM 9 C3' A B 103 77.075 141.829 34.933 1.00 34.06 C
ATOM 10 O3' A B 103 78.157 141.444 35.766 1.00 32.60 O
ATOM 11 C2' A B 103 77.077 141.068 33.609 1.00 34.82 C
ATOM 12 O2' A B 103 77.487 139.728 33.783 1.00 31.25 O
ATOM 13 C1' A B 103 75.592 141.127 33.209 1.00 36.56 C
ATOM 14 N9 A B 103 75.247 141.997 32.079 1.00 39.88 N
ATOM 15 C8 A B 103 75.895 143.122 31.629 1.00 40.26 C
ATOM 16 N7 A B 103 75.327 143.677 30.584 1.00 40.32 N
ATOM 17 C5 A B 103 74.232 142.865 30.327 1.00 40.78 C
ATOM 18 C6 A B 103 73.228 142.908 29.339 1.00 40.99 C
ATOM 19 N6 A B 103 73.155 143.842 28.388 1.00 40.78 N
ATOM 20 N1 A B 103 72.286 141.944 29.360 1.00 40.38 N
ATOM 21 C2 A B 103 72.353 141.008 30.303 1.00 40.63 C
ATOM 22 N3 A B 103 73.243 140.856 31.281 1.00 42.47 N
ATOM 23 C4 A B 103 74.169 141.828 31.238 1.00 41.27 C
ATOM 24 P A B 104 79.645 141.941 35.410 1.00 36.00 P
ATOM 25 OP1 A B 104 80.267 140.988 34.444 1.00 33.09 O
ATOM 26 OP2 A B 104 80.343 142.245 36.683 1.00 35.45 O
ATOM 27 O5' A B 104 79.405 143.311 34.639 1.00 34.30 O
TER
Atoms:
OP1: (80.267,140.988,34.444)
OP2: (80.343,142.245,36.683)
C3': (78.878,147.061,34.949)
C1': (77.121,146.659,33.452)
C5': (79.063,144.519,35.335)
O4': (77.891,145.481,33.460)
C8: (74.902,145.438,33.820)
O2': (77.035,148.680,34.758)
C6: (72.695,146.856,31.464)
C5: (73.692,146.378,32.346)
C4: (74.951,146.930,32.223)
P: (79.645,141.941,35.410)
C4': (79.022,145.663,34.356)
C2': (77.384,147.313,34.802)
C2: (74.316,148.246,30.583)
N1: (73.049,147.811,30.582)
N3: (75.337,147.873,31.349)
N6: (71.433,146.422,31.449)
N7: (73.674,145.431,33.358)
N9: (75.721,146.332,33.190)
O5': (79.405,143.311,34.639)
O3': (79.557,147.999,34.112)
OP2: (80.343,142.245,36.683)
C3': (78.878,147.061,34.949)
C1': (77.121,146.659,33.452)
C5': (79.063,144.519,35.335)
O4': (77.891,145.481,33.460)
C8: (74.902,145.438,33.820)
O2': (77.035,148.680,34.758)
C6: (72.695,146.856,31.464)
C5: (73.692,146.378,32.346)
C4: (74.951,146.930,32.223)
P: (79.645,141.941,35.410)
C4': (79.022,145.663,34.356)
C2': (77.384,147.313,34.802)
C2: (74.316,148.246,30.583)
N1: (73.049,147.811,30.582)
N3: (75.337,147.873,31.349)
N6: (71.433,146.422,31.449)
N7: (73.674,145.431,33.358)
N9: (75.721,146.332,33.190)
O5': (79.405,143.311,34.639)
O3': (79.557,147.999,34.112)
OP1: (76.504,143.635,38.790)
OP2: (76.818,145.671,37.277)
C3': (77.075,141.829,34.933)
C1': (75.592,141.127,33.209)
C5': (75.210,142.283,36.651)
O4': (74.867,141.557,34.350)
C8: (75.895,143.122,31.629)
O2': (77.487,139.728,33.783)
C6: (73.228,142.908,29.339)
C5: (74.232,142.865,30.327)
C4: (74.169,141.828,31.238)
P: (75.983,144.544,37.742)
C4': (75.730,141.443,35.509)
C2': (77.077,141.068,33.609)
C2: (72.353,141.008,30.303)
N1: (72.286,141.944,29.360)
N3: (73.243,140.856,31.281)
N6: (73.155,143.842,28.388)
N7: (75.327,143.677,30.584)
N9: (75.247,141.997,32.079)
O5': (75.575,143.662,36.481)
O3': (78.157,141.444,35.766)
OP2: (76.818,145.671,37.277)
C3': (77.075,141.829,34.933)
C1': (75.592,141.127,33.209)
C5': (75.210,142.283,36.651)
O4': (74.867,141.557,34.350)
C8: (75.895,143.122,31.629)
O2': (77.487,139.728,33.783)
C6: (73.228,142.908,29.339)
C5: (74.232,142.865,30.327)
C4: (74.169,141.828,31.238)
P: (75.983,144.544,37.742)
C4': (75.730,141.443,35.509)
C2': (77.077,141.068,33.609)
C2: (72.353,141.008,30.303)
N1: (72.286,141.944,29.360)
N3: (73.243,140.856,31.281)
N6: (73.155,143.842,28.388)
N7: (75.327,143.677,30.584)
N9: (75.247,141.997,32.079)
O5': (75.575,143.662,36.481)
O3': (78.157,141.444,35.766)
Image (generated by PyMOL):