Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1QBP:F8:E7
Extra
PDB:
ATOM 1 O3' U A 7 -0.311 7.594 -5.461 1.00 58.40 O
ATOM 2 P C A 8 0.052 7.401 -7.002 1.00 56.66 P
ATOM 3 OP1 C A 8 -1.060 6.655 -7.622 1.00 58.35 O
ATOM 4 OP2 C A 8 1.425 6.867 -7.097 1.00 54.72 O
ATOM 5 O5' C A 8 0.051 8.892 -7.546 1.00 57.37 O
ATOM 6 C5' C A 8 -1.114 9.701 -7.389 1.00 57.49 C
ATOM 7 C4' C A 8 -0.761 11.168 -7.392 1.00 57.83 C
ATOM 8 O4' C A 8 0.115 11.486 -6.274 1.00 55.09 O
ATOM 9 C3' C A 8 0.003 11.722 -8.581 1.00 58.38 C
ATOM 10 O3' C A 8 -0.773 11.860 -9.757 1.00 61.30 O
ATOM 11 C2' C A 8 0.512 13.050 -8.030 1.00 57.10 C
ATOM 12 O2' C A 8 -0.497 14.048 -8.068 1.00 55.66 O
ATOM 13 C1' C A 8 0.827 12.676 -6.573 1.00 54.00 C
ATOM 14 N1 C A 8 2.264 12.424 -6.429 1.00 52.00 N
ATOM 15 C2 C A 8 3.124 13.509 -6.485 1.00 51.38 C
ATOM 16 O2 C A 8 2.636 14.641 -6.597 1.00 52.68 O
ATOM 17 N3 C A 8 4.463 13.303 -6.423 1.00 51.57 N
ATOM 18 C4 C A 8 4.937 12.063 -6.313 1.00 49.25 C
ATOM 19 N4 C A 8 6.252 11.900 -6.288 1.00 49.20 N
ATOM 20 C5 C A 8 4.080 10.937 -6.230 1.00 50.49 C
ATOM 21 C6 C A 8 2.758 11.159 -6.283 1.00 52.18 C
ATOM 22 P G A 9 -0.045 11.809 -11.187 1.00 63.28 P
ATOM 23 OP1 G A 9 -1.065 12.125 -12.220 1.00 66.69 O
ATOM 24 OP2 G A 9 0.699 10.527 -11.262 1.00 63.41 O
ATOM 25 O5' G A 9 0.982 13.021 -11.135 1.00 60.28 O
TER
ATOM 1 O3' U B 6 15.680 15.249 -7.183 1.00 30.58 O
ATOM 2 P U B 7 15.157 15.539 -5.695 1.00 32.59 P
ATOM 3 OP1 U B 7 16.257 16.174 -4.953 1.00 38.16 O
ATOM 4 OP2 U B 7 14.533 14.321 -5.166 1.00 35.10 O
ATOM 5 O5' U B 7 14.017 16.616 -5.887 1.00 34.78 O
ATOM 6 C5' U B 7 14.271 17.814 -6.613 1.00 38.22 C
ATOM 7 C4' U B 7 13.034 18.673 -6.612 1.00 40.48 C
ATOM 8 O4' U B 7 12.032 18.137 -7.519 1.00 38.80 O
ATOM 9 C3' U B 7 12.334 18.728 -5.267 1.00 42.33 C
ATOM 10 O3' U B 7 12.976 19.653 -4.400 1.00 44.13 O
ATOM 11 C2' U B 7 10.917 19.122 -5.666 1.00 41.31 C
ATOM 12 O2' U B 7 10.872 20.512 -5.956 1.00 46.01 O
ATOM 13 C1' U B 7 10.746 18.362 -6.991 1.00 36.08 C
ATOM 14 N1 U B 7 10.088 17.064 -6.814 1.00 28.38 N
ATOM 15 C2 U B 7 8.710 17.027 -6.724 1.00 30.33 C
ATOM 16 O2 U B 7 8.011 18.011 -6.776 1.00 35.43 O
ATOM 17 N3 U B 7 8.171 15.783 -6.568 1.00 24.42 N
ATOM 18 C4 U B 7 8.849 14.603 -6.495 1.00 20.71 C
ATOM 19 O4 U B 7 8.221 13.568 -6.307 1.00 19.52 O
ATOM 20 C5 U B 7 10.265 14.720 -6.598 1.00 22.85 C
ATOM 21 C6 U B 7 10.822 15.921 -6.748 1.00 26.63 C
ATOM 22 P C B 8 12.767 19.556 -2.815 1.00 44.86 P
ATOM 23 OP1 C B 8 13.927 20.214 -2.194 1.00 46.67 O
ATOM 24 OP2 C B 8 12.429 18.160 -2.437 1.00 44.78 O
ATOM 25 O5' C B 8 11.520 20.504 -2.562 1.00 46.30 O
TER
ATOM 2 P C A 8 0.052 7.401 -7.002 1.00 56.66 P
ATOM 3 OP1 C A 8 -1.060 6.655 -7.622 1.00 58.35 O
ATOM 4 OP2 C A 8 1.425 6.867 -7.097 1.00 54.72 O
ATOM 5 O5' C A 8 0.051 8.892 -7.546 1.00 57.37 O
ATOM 6 C5' C A 8 -1.114 9.701 -7.389 1.00 57.49 C
ATOM 7 C4' C A 8 -0.761 11.168 -7.392 1.00 57.83 C
ATOM 8 O4' C A 8 0.115 11.486 -6.274 1.00 55.09 O
ATOM 9 C3' C A 8 0.003 11.722 -8.581 1.00 58.38 C
ATOM 10 O3' C A 8 -0.773 11.860 -9.757 1.00 61.30 O
ATOM 11 C2' C A 8 0.512 13.050 -8.030 1.00 57.10 C
ATOM 12 O2' C A 8 -0.497 14.048 -8.068 1.00 55.66 O
ATOM 13 C1' C A 8 0.827 12.676 -6.573 1.00 54.00 C
ATOM 14 N1 C A 8 2.264 12.424 -6.429 1.00 52.00 N
ATOM 15 C2 C A 8 3.124 13.509 -6.485 1.00 51.38 C
ATOM 16 O2 C A 8 2.636 14.641 -6.597 1.00 52.68 O
ATOM 17 N3 C A 8 4.463 13.303 -6.423 1.00 51.57 N
ATOM 18 C4 C A 8 4.937 12.063 -6.313 1.00 49.25 C
ATOM 19 N4 C A 8 6.252 11.900 -6.288 1.00 49.20 N
ATOM 20 C5 C A 8 4.080 10.937 -6.230 1.00 50.49 C
ATOM 21 C6 C A 8 2.758 11.159 -6.283 1.00 52.18 C
ATOM 22 P G A 9 -0.045 11.809 -11.187 1.00 63.28 P
ATOM 23 OP1 G A 9 -1.065 12.125 -12.220 1.00 66.69 O
ATOM 24 OP2 G A 9 0.699 10.527 -11.262 1.00 63.41 O
ATOM 25 O5' G A 9 0.982 13.021 -11.135 1.00 60.28 O
TER
ATOM 1 O3' U B 6 15.680 15.249 -7.183 1.00 30.58 O
ATOM 2 P U B 7 15.157 15.539 -5.695 1.00 32.59 P
ATOM 3 OP1 U B 7 16.257 16.174 -4.953 1.00 38.16 O
ATOM 4 OP2 U B 7 14.533 14.321 -5.166 1.00 35.10 O
ATOM 5 O5' U B 7 14.017 16.616 -5.887 1.00 34.78 O
ATOM 6 C5' U B 7 14.271 17.814 -6.613 1.00 38.22 C
ATOM 7 C4' U B 7 13.034 18.673 -6.612 1.00 40.48 C
ATOM 8 O4' U B 7 12.032 18.137 -7.519 1.00 38.80 O
ATOM 9 C3' U B 7 12.334 18.728 -5.267 1.00 42.33 C
ATOM 10 O3' U B 7 12.976 19.653 -4.400 1.00 44.13 O
ATOM 11 C2' U B 7 10.917 19.122 -5.666 1.00 41.31 C
ATOM 12 O2' U B 7 10.872 20.512 -5.956 1.00 46.01 O
ATOM 13 C1' U B 7 10.746 18.362 -6.991 1.00 36.08 C
ATOM 14 N1 U B 7 10.088 17.064 -6.814 1.00 28.38 N
ATOM 15 C2 U B 7 8.710 17.027 -6.724 1.00 30.33 C
ATOM 16 O2 U B 7 8.011 18.011 -6.776 1.00 35.43 O
ATOM 17 N3 U B 7 8.171 15.783 -6.568 1.00 24.42 N
ATOM 18 C4 U B 7 8.849 14.603 -6.495 1.00 20.71 C
ATOM 19 O4 U B 7 8.221 13.568 -6.307 1.00 19.52 O
ATOM 20 C5 U B 7 10.265 14.720 -6.598 1.00 22.85 C
ATOM 21 C6 U B 7 10.822 15.921 -6.748 1.00 26.63 C
ATOM 22 P C B 8 12.767 19.556 -2.815 1.00 44.86 P
ATOM 23 OP1 C B 8 13.927 20.214 -2.194 1.00 46.67 O
ATOM 24 OP2 C B 8 12.429 18.160 -2.437 1.00 44.78 O
ATOM 25 O5' C B 8 11.520 20.504 -2.562 1.00 46.30 O
TER
Atoms:
C2: (3.124,13.509,-6.485)
OP1: (-1.060,6.655,-7.622)
OP2: (1.425,6.867,-7.097)
C4: (4.937,12.063,-6.313)
O5': (0.051,8.892,-7.546)
C3': (0.003,11.722,-8.581)
C1': (0.827,12.676,-6.573)
O4': (0.115,11.486,-6.274)
C5': (-1.114,9.701,-7.389)
P: (0.052,7.401,-7.002)
O2: (2.636,14.641,-6.597)
C4': (-0.761,11.168,-7.392)
C2': (0.512,13.050,-8.030)
O2': (-0.497,14.048,-8.068)
N1: (2.264,12.424,-6.429)
N3: (4.463,13.303,-6.423)
N4: (6.252,11.900,-6.288)
C6: (2.758,11.159,-6.283)
C5: (4.080,10.937,-6.230)
O3': (-0.773,11.860,-9.757)
OP1: (-1.060,6.655,-7.622)
OP2: (1.425,6.867,-7.097)
C4: (4.937,12.063,-6.313)
O5': (0.051,8.892,-7.546)
C3': (0.003,11.722,-8.581)
C1': (0.827,12.676,-6.573)
O4': (0.115,11.486,-6.274)
C5': (-1.114,9.701,-7.389)
P: (0.052,7.401,-7.002)
O2: (2.636,14.641,-6.597)
C4': (-0.761,11.168,-7.392)
C2': (0.512,13.050,-8.030)
O2': (-0.497,14.048,-8.068)
N1: (2.264,12.424,-6.429)
N3: (4.463,13.303,-6.423)
N4: (6.252,11.900,-6.288)
C6: (2.758,11.159,-6.283)
C5: (4.080,10.937,-6.230)
O3': (-0.773,11.860,-9.757)
C4: (8.849,14.603,-6.495)
N3: (8.171,15.783,-6.568)
OP1: (16.257,16.174,-4.953)
OP2: (14.533,14.321,-5.166)
C2: (8.710,17.027,-6.724)
C1': (10.746,18.362,-6.991)
C3': (12.334,18.728,-5.267)
O5': (14.017,16.616,-5.887)
O4': (12.032,18.137,-7.519)
C5': (14.271,17.814,-6.613)
P: (15.157,15.539,-5.695)
C4': (13.034,18.673,-6.612)
C2': (10.917,19.122,-5.666)
O2': (10.872,20.512,-5.956)
N1: (10.088,17.064,-6.814)
O4: (8.221,13.568,-6.307)
O2: (8.011,18.011,-6.776)
C6: (10.822,15.921,-6.748)
C5: (10.265,14.720,-6.598)
O3': (12.976,19.653,-4.400)
N3: (8.171,15.783,-6.568)
OP1: (16.257,16.174,-4.953)
OP2: (14.533,14.321,-5.166)
C2: (8.710,17.027,-6.724)
C1': (10.746,18.362,-6.991)
C3': (12.334,18.728,-5.267)
O5': (14.017,16.616,-5.887)
O4': (12.032,18.137,-7.519)
C5': (14.271,17.814,-6.613)
P: (15.157,15.539,-5.695)
C4': (13.034,18.673,-6.612)
C2': (10.917,19.122,-5.666)
O2': (10.872,20.512,-5.956)
N1: (10.088,17.064,-6.814)
O4: (8.221,13.568,-6.307)
O2: (8.011,18.011,-6.776)
C6: (10.822,15.921,-6.748)
C5: (10.265,14.720,-6.598)
O3': (12.976,19.653,-4.400)
Image (generated by PyMOL):