Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1353:A1391
Extra
PDB:
ATOM 1 O3' A A1352 52.041 178.292 87.378 1.00 46.91 O
ATOM 2 P C A1353 51.646 178.308 85.833 1.00 47.20 P
ATOM 3 OP1 C A1353 51.628 179.722 85.382 1.00 48.20 O
ATOM 4 OP2 C A1353 50.410 177.484 85.716 1.00 47.73 O
ATOM 5 O5' C A1353 52.876 177.569 85.149 1.00 46.01 O
ATOM 6 C5' C A1353 54.215 178.048 85.357 1.00 43.46 C
ATOM 7 C4' C A1353 55.197 176.899 85.385 1.00 42.84 C
ATOM 8 O4' C A1353 54.865 175.972 86.453 1.00 42.50 O
ATOM 9 C3' C A1353 55.217 176.040 84.137 1.00 41.42 C
ATOM 10 O3' C A1353 55.988 176.628 83.090 1.00 41.42 O
ATOM 11 C2' C A1353 55.794 174.726 84.651 1.00 41.61 C
ATOM 12 O2' C A1353 57.201 174.714 84.805 1.00 38.26 O
ATOM 13 C1' C A1353 55.158 174.647 86.038 1.00 42.65 C
ATOM 14 N1 C A1353 53.916 173.860 86.080 1.00 44.48 N
ATOM 15 C2 C A1353 53.982 172.443 86.031 1.00 45.15 C
ATOM 16 O2 C A1353 55.087 171.881 85.957 1.00 47.12 O
ATOM 17 N3 C A1353 52.841 171.731 86.070 1.00 45.70 N
ATOM 18 C4 C A1353 51.667 172.364 86.158 1.00 46.60 C
ATOM 19 N4 C A1353 50.540 171.632 86.203 1.00 45.65 N
ATOM 20 C5 C A1353 51.578 173.788 86.209 1.00 47.25 C
ATOM 21 C6 C A1353 52.709 174.485 86.167 1.00 45.83 C
ATOM 22 P C A1354 56.121 175.865 81.674 1.00 42.48 P
ATOM 23 OP1 C A1354 54.951 174.979 81.495 1.00 41.98 O
ATOM 24 OP2 C A1354 57.487 175.310 81.551 1.00 42.32 O
ATOM 25 O5' C A1354 56.007 177.004 80.573 1.00 41.88 O
TER
ATOM 1 O3' C B1390 53.803 162.117 83.247 1.00 39.48 O
ATOM 2 P U B1391 52.759 163.086 82.510 1.00 39.92 P
ATOM 3 OP1 U B1391 51.721 162.291 81.796 1.00 39.80 O
ATOM 4 OP2 U B1391 53.597 164.032 81.747 1.00 39.40 O
ATOM 5 O5' U B1391 52.060 163.831 83.728 1.00 39.14 O
ATOM 6 C5' U B1391 51.027 163.164 84.481 1.00 40.60 C
ATOM 7 C4' U B1391 50.252 164.143 85.338 1.00 41.11 C
ATOM 8 O4' U B1391 51.141 164.727 86.317 1.00 40.92 O
ATOM 9 C3' U B1391 49.621 165.328 84.626 1.00 41.40 C
ATOM 10 O3' U B1391 48.366 164.991 84.054 1.00 40.92 O
ATOM 11 C2' U B1391 49.556 166.391 85.720 1.00 41.44 C
ATOM 12 O2' U B1391 48.483 166.256 86.638 1.00 40.92 O
ATOM 13 C1' U B1391 50.860 166.109 86.461 1.00 41.55 C
ATOM 14 N1 U B1391 52.031 166.855 85.978 1.00 41.74 N
ATOM 15 C2 U B1391 52.069 168.218 86.190 1.00 41.97 C
ATOM 16 O2 U B1391 51.130 168.847 86.671 1.00 42.72 O
ATOM 17 N3 U B1391 53.240 168.829 85.809 1.00 40.86 N
ATOM 18 C4 U B1391 54.333 168.244 85.224 1.00 40.15 C
ATOM 19 O4 U B1391 55.327 168.925 85.000 1.00 39.50 O
ATOM 20 C5 U B1391 54.204 166.844 84.985 1.00 41.02 C
ATOM 21 C6 U B1391 53.086 166.209 85.361 1.00 41.68 C
ATOM 22 P G B1392 48.059 165.387 82.524 1.00 41.33 P
ATOM 23 OP1 G B1392 46.684 164.928 82.198 1.00 38.55 O
ATOM 24 OP2 G B1392 49.198 164.987 81.654 1.00 39.37 O
ATOM 25 O5' G B1392 48.017 166.978 82.550 1.00 39.21 O
TER
ATOM 2 P C A1353 51.646 178.308 85.833 1.00 47.20 P
ATOM 3 OP1 C A1353 51.628 179.722 85.382 1.00 48.20 O
ATOM 4 OP2 C A1353 50.410 177.484 85.716 1.00 47.73 O
ATOM 5 O5' C A1353 52.876 177.569 85.149 1.00 46.01 O
ATOM 6 C5' C A1353 54.215 178.048 85.357 1.00 43.46 C
ATOM 7 C4' C A1353 55.197 176.899 85.385 1.00 42.84 C
ATOM 8 O4' C A1353 54.865 175.972 86.453 1.00 42.50 O
ATOM 9 C3' C A1353 55.217 176.040 84.137 1.00 41.42 C
ATOM 10 O3' C A1353 55.988 176.628 83.090 1.00 41.42 O
ATOM 11 C2' C A1353 55.794 174.726 84.651 1.00 41.61 C
ATOM 12 O2' C A1353 57.201 174.714 84.805 1.00 38.26 O
ATOM 13 C1' C A1353 55.158 174.647 86.038 1.00 42.65 C
ATOM 14 N1 C A1353 53.916 173.860 86.080 1.00 44.48 N
ATOM 15 C2 C A1353 53.982 172.443 86.031 1.00 45.15 C
ATOM 16 O2 C A1353 55.087 171.881 85.957 1.00 47.12 O
ATOM 17 N3 C A1353 52.841 171.731 86.070 1.00 45.70 N
ATOM 18 C4 C A1353 51.667 172.364 86.158 1.00 46.60 C
ATOM 19 N4 C A1353 50.540 171.632 86.203 1.00 45.65 N
ATOM 20 C5 C A1353 51.578 173.788 86.209 1.00 47.25 C
ATOM 21 C6 C A1353 52.709 174.485 86.167 1.00 45.83 C
ATOM 22 P C A1354 56.121 175.865 81.674 1.00 42.48 P
ATOM 23 OP1 C A1354 54.951 174.979 81.495 1.00 41.98 O
ATOM 24 OP2 C A1354 57.487 175.310 81.551 1.00 42.32 O
ATOM 25 O5' C A1354 56.007 177.004 80.573 1.00 41.88 O
TER
ATOM 1 O3' C B1390 53.803 162.117 83.247 1.00 39.48 O
ATOM 2 P U B1391 52.759 163.086 82.510 1.00 39.92 P
ATOM 3 OP1 U B1391 51.721 162.291 81.796 1.00 39.80 O
ATOM 4 OP2 U B1391 53.597 164.032 81.747 1.00 39.40 O
ATOM 5 O5' U B1391 52.060 163.831 83.728 1.00 39.14 O
ATOM 6 C5' U B1391 51.027 163.164 84.481 1.00 40.60 C
ATOM 7 C4' U B1391 50.252 164.143 85.338 1.00 41.11 C
ATOM 8 O4' U B1391 51.141 164.727 86.317 1.00 40.92 O
ATOM 9 C3' U B1391 49.621 165.328 84.626 1.00 41.40 C
ATOM 10 O3' U B1391 48.366 164.991 84.054 1.00 40.92 O
ATOM 11 C2' U B1391 49.556 166.391 85.720 1.00 41.44 C
ATOM 12 O2' U B1391 48.483 166.256 86.638 1.00 40.92 O
ATOM 13 C1' U B1391 50.860 166.109 86.461 1.00 41.55 C
ATOM 14 N1 U B1391 52.031 166.855 85.978 1.00 41.74 N
ATOM 15 C2 U B1391 52.069 168.218 86.190 1.00 41.97 C
ATOM 16 O2 U B1391 51.130 168.847 86.671 1.00 42.72 O
ATOM 17 N3 U B1391 53.240 168.829 85.809 1.00 40.86 N
ATOM 18 C4 U B1391 54.333 168.244 85.224 1.00 40.15 C
ATOM 19 O4 U B1391 55.327 168.925 85.000 1.00 39.50 O
ATOM 20 C5 U B1391 54.204 166.844 84.985 1.00 41.02 C
ATOM 21 C6 U B1391 53.086 166.209 85.361 1.00 41.68 C
ATOM 22 P G B1392 48.059 165.387 82.524 1.00 41.33 P
ATOM 23 OP1 G B1392 46.684 164.928 82.198 1.00 38.55 O
ATOM 24 OP2 G B1392 49.198 164.987 81.654 1.00 39.37 O
ATOM 25 O5' G B1392 48.017 166.978 82.550 1.00 39.21 O
TER
Atoms:
C2: (53.982,172.443,86.031)
OP1: (51.628,179.722,85.382)
OP2: (50.410,177.484,85.716)
C4: (51.667,172.364,86.158)
O5': (52.876,177.569,85.149)
C3': (55.217,176.040,84.137)
C1': (55.158,174.647,86.038)
O4': (54.865,175.972,86.453)
C5': (54.215,178.048,85.357)
P: (51.646,178.308,85.833)
O2: (55.087,171.881,85.957)
C4': (55.197,176.899,85.385)
C2': (55.794,174.726,84.651)
O2': (57.201,174.714,84.805)
N1: (53.916,173.860,86.080)
N3: (52.841,171.731,86.070)
N4: (50.540,171.632,86.203)
C6: (52.709,174.485,86.167)
C5: (51.578,173.788,86.209)
O3': (55.988,176.628,83.090)
OP1: (51.628,179.722,85.382)
OP2: (50.410,177.484,85.716)
C4: (51.667,172.364,86.158)
O5': (52.876,177.569,85.149)
C3': (55.217,176.040,84.137)
C1': (55.158,174.647,86.038)
O4': (54.865,175.972,86.453)
C5': (54.215,178.048,85.357)
P: (51.646,178.308,85.833)
O2: (55.087,171.881,85.957)
C4': (55.197,176.899,85.385)
C2': (55.794,174.726,84.651)
O2': (57.201,174.714,84.805)
N1: (53.916,173.860,86.080)
N3: (52.841,171.731,86.070)
N4: (50.540,171.632,86.203)
C6: (52.709,174.485,86.167)
C5: (51.578,173.788,86.209)
O3': (55.988,176.628,83.090)
C4: (54.333,168.244,85.224)
N3: (53.240,168.829,85.809)
OP1: (51.721,162.291,81.796)
OP2: (53.597,164.032,81.747)
C2: (52.069,168.218,86.190)
C1': (50.860,166.109,86.461)
C3': (49.621,165.328,84.626)
O5': (52.060,163.831,83.728)
O4': (51.141,164.727,86.317)
C5': (51.027,163.164,84.481)
P: (52.759,163.086,82.510)
C4': (50.252,164.143,85.338)
C2': (49.556,166.391,85.720)
O2': (48.483,166.256,86.638)
N1: (52.031,166.855,85.978)
O4: (55.327,168.925,85.000)
O2: (51.130,168.847,86.671)
C6: (53.086,166.209,85.361)
C5: (54.204,166.844,84.985)
O3': (48.366,164.991,84.054)
N3: (53.240,168.829,85.809)
OP1: (51.721,162.291,81.796)
OP2: (53.597,164.032,81.747)
C2: (52.069,168.218,86.190)
C1': (50.860,166.109,86.461)
C3': (49.621,165.328,84.626)
O5': (52.060,163.831,83.728)
O4': (51.141,164.727,86.317)
C5': (51.027,163.164,84.481)
P: (52.759,163.086,82.510)
C4': (50.252,164.143,85.338)
C2': (49.556,166.391,85.720)
O2': (48.483,166.256,86.638)
N1: (52.031,166.855,85.978)
O4: (55.327,168.925,85.000)
O2: (51.130,168.847,86.671)
C6: (53.086,166.209,85.361)
C5: (54.204,166.844,84.985)
O3': (48.366,164.991,84.054)
Image (generated by PyMOL):