Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01353:01391
Extra
PDB:
ATOM 1 O3' A A1352 51.951 178.352 87.200 1.00 41.27 O
ATOM 2 P C A1353 51.577 178.372 85.643 1.00 42.23 P
ATOM 3 OP1 C A1353 51.672 179.780 85.208 1.00 45.26 O
ATOM 4 OP2 C A1353 50.304 177.624 85.437 1.00 41.33 O
ATOM 5 O5' C A1353 52.777 177.588 84.955 1.00 41.20 O
ATOM 6 C5' C A1353 54.118 178.089 85.047 1.00 38.89 C
ATOM 7 C4' C A1353 55.099 176.948 85.097 1.00 38.23 C
ATOM 8 O4' C A1353 54.763 176.060 86.196 1.00 37.81 O
ATOM 9 C3' C A1353 55.103 176.034 83.889 1.00 36.78 C
ATOM 10 O3' C A1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 11 C2' C A1353 55.724 174.767 84.453 1.00 36.80 C
ATOM 12 O2' C A1353 57.124 174.876 84.599 1.00 35.42 O
ATOM 13 C1' C A1353 55.076 174.720 85.835 1.00 36.69 C
ATOM 14 N1 C A1353 53.835 173.920 85.863 1.00 37.42 N
ATOM 15 C2 C A1353 53.928 172.520 85.874 1.00 37.10 C
ATOM 16 O2 C A1353 55.047 171.988 85.806 1.00 38.70 O
ATOM 17 N3 C A1353 52.798 171.786 85.955 1.00 36.32 N
ATOM 18 C4 C A1353 51.615 172.392 86.016 1.00 35.73 C
ATOM 19 N4 C A1353 50.533 171.632 86.129 1.00 36.12 N
ATOM 20 C5 C A1353 51.488 173.807 85.973 1.00 36.67 C
ATOM 21 C6 C A1353 52.610 174.526 85.896 1.00 36.37 C
ATOM 22 P C A1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 23 OP1 C A1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 24 OP2 C A1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 25 O5' C A1354 56.012 177.005 80.399 1.00 36.50 O
TER
ATOM 1 O3' C B1390 53.756 162.343 83.203 1.00 38.44 O
ATOM 2 P U B1391 52.715 163.199 82.340 1.00 39.00 P
ATOM 3 OP1 U B1391 51.861 162.202 81.644 1.00 40.94 O
ATOM 4 OP2 U B1391 53.457 164.212 81.540 1.00 37.14 O
ATOM 5 O5' U B1391 51.842 163.946 83.442 1.00 34.01 O
ATOM 6 C5' U B1391 50.823 163.249 84.169 1.00 34.36 C
ATOM 7 C4' U B1391 50.075 164.207 85.068 1.00 34.44 C
ATOM 8 O4' U B1391 50.980 164.726 86.073 1.00 34.32 O
ATOM 9 C3' U B1391 49.511 165.431 84.368 1.00 33.60 C
ATOM 10 O3' U B1391 48.228 165.149 83.820 1.00 33.83 O
ATOM 11 C2' U B1391 49.478 166.464 85.488 1.00 32.30 C
ATOM 12 O2' U B1391 48.377 166.306 86.359 1.00 30.42 O
ATOM 13 C1' U B1391 50.757 166.113 86.251 1.00 32.80 C
ATOM 14 N1 U B1391 51.974 166.827 85.821 1.00 33.52 N
ATOM 15 C2 U B1391 52.014 168.203 85.980 1.00 34.41 C
ATOM 16 O2 U B1391 51.080 168.847 86.421 1.00 35.94 O
ATOM 17 N3 U B1391 53.193 168.798 85.601 1.00 35.07 N
ATOM 18 C4 U B1391 54.312 168.177 85.089 1.00 35.05 C
ATOM 19 O4 U B1391 55.308 168.851 84.823 1.00 36.15 O
ATOM 20 C5 U B1391 54.190 166.760 84.934 1.00 34.13 C
ATOM 21 C6 U B1391 53.056 166.149 85.291 1.00 32.34 C
ATOM 22 P G B1392 47.863 165.641 82.334 1.00 36.23 P
ATOM 23 OP1 G B1392 46.471 165.181 82.052 1.00 31.63 O
ATOM 24 OP2 G B1392 48.966 165.262 81.419 1.00 34.04 O
ATOM 25 O5' G B1392 47.852 167.226 82.445 1.00 33.24 O
TER
ATOM 2 P C A1353 51.577 178.372 85.643 1.00 42.23 P
ATOM 3 OP1 C A1353 51.672 179.780 85.208 1.00 45.26 O
ATOM 4 OP2 C A1353 50.304 177.624 85.437 1.00 41.33 O
ATOM 5 O5' C A1353 52.777 177.588 84.955 1.00 41.20 O
ATOM 6 C5' C A1353 54.118 178.089 85.047 1.00 38.89 C
ATOM 7 C4' C A1353 55.099 176.948 85.097 1.00 38.23 C
ATOM 8 O4' C A1353 54.763 176.060 86.196 1.00 37.81 O
ATOM 9 C3' C A1353 55.103 176.034 83.889 1.00 36.78 C
ATOM 10 O3' C A1353 55.892 176.581 82.859 1.00 37.38 O
ATOM 11 C2' C A1353 55.724 174.767 84.453 1.00 36.80 C
ATOM 12 O2' C A1353 57.124 174.876 84.599 1.00 35.42 O
ATOM 13 C1' C A1353 55.076 174.720 85.835 1.00 36.69 C
ATOM 14 N1 C A1353 53.835 173.920 85.863 1.00 37.42 N
ATOM 15 C2 C A1353 53.928 172.520 85.874 1.00 37.10 C
ATOM 16 O2 C A1353 55.047 171.988 85.806 1.00 38.70 O
ATOM 17 N3 C A1353 52.798 171.786 85.955 1.00 36.32 N
ATOM 18 C4 C A1353 51.615 172.392 86.016 1.00 35.73 C
ATOM 19 N4 C A1353 50.533 171.632 86.129 1.00 36.12 N
ATOM 20 C5 C A1353 51.488 173.807 85.973 1.00 36.67 C
ATOM 21 C6 C A1353 52.610 174.526 85.896 1.00 36.37 C
ATOM 22 P C A1354 56.008 175.817 81.457 1.00 37.85 P
ATOM 23 OP1 C A1354 54.780 175.014 81.258 1.00 40.61 O
ATOM 24 OP2 C A1354 57.325 175.148 81.430 1.00 37.81 O
ATOM 25 O5' C A1354 56.012 177.005 80.399 1.00 36.50 O
TER
ATOM 1 O3' C B1390 53.756 162.343 83.203 1.00 38.44 O
ATOM 2 P U B1391 52.715 163.199 82.340 1.00 39.00 P
ATOM 3 OP1 U B1391 51.861 162.202 81.644 1.00 40.94 O
ATOM 4 OP2 U B1391 53.457 164.212 81.540 1.00 37.14 O
ATOM 5 O5' U B1391 51.842 163.946 83.442 1.00 34.01 O
ATOM 6 C5' U B1391 50.823 163.249 84.169 1.00 34.36 C
ATOM 7 C4' U B1391 50.075 164.207 85.068 1.00 34.44 C
ATOM 8 O4' U B1391 50.980 164.726 86.073 1.00 34.32 O
ATOM 9 C3' U B1391 49.511 165.431 84.368 1.00 33.60 C
ATOM 10 O3' U B1391 48.228 165.149 83.820 1.00 33.83 O
ATOM 11 C2' U B1391 49.478 166.464 85.488 1.00 32.30 C
ATOM 12 O2' U B1391 48.377 166.306 86.359 1.00 30.42 O
ATOM 13 C1' U B1391 50.757 166.113 86.251 1.00 32.80 C
ATOM 14 N1 U B1391 51.974 166.827 85.821 1.00 33.52 N
ATOM 15 C2 U B1391 52.014 168.203 85.980 1.00 34.41 C
ATOM 16 O2 U B1391 51.080 168.847 86.421 1.00 35.94 O
ATOM 17 N3 U B1391 53.193 168.798 85.601 1.00 35.07 N
ATOM 18 C4 U B1391 54.312 168.177 85.089 1.00 35.05 C
ATOM 19 O4 U B1391 55.308 168.851 84.823 1.00 36.15 O
ATOM 20 C5 U B1391 54.190 166.760 84.934 1.00 34.13 C
ATOM 21 C6 U B1391 53.056 166.149 85.291 1.00 32.34 C
ATOM 22 P G B1392 47.863 165.641 82.334 1.00 36.23 P
ATOM 23 OP1 G B1392 46.471 165.181 82.052 1.00 31.63 O
ATOM 24 OP2 G B1392 48.966 165.262 81.419 1.00 34.04 O
ATOM 25 O5' G B1392 47.852 167.226 82.445 1.00 33.24 O
TER
Atoms:
C2: (53.928,172.520,85.874)
OP1: (51.672,179.780,85.208)
OP2: (50.304,177.624,85.437)
C4: (51.615,172.392,86.016)
O5': (52.777,177.588,84.955)
C3': (55.103,176.034,83.889)
C1': (55.076,174.720,85.835)
O4': (54.763,176.060,86.196)
C5': (54.118,178.089,85.047)
P: (51.577,178.372,85.643)
O2: (55.047,171.988,85.806)
C4': (55.099,176.948,85.097)
C2': (55.724,174.767,84.453)
O2': (57.124,174.876,84.599)
N1: (53.835,173.920,85.863)
N3: (52.798,171.786,85.955)
N4: (50.533,171.632,86.129)
C6: (52.610,174.526,85.896)
C5: (51.488,173.807,85.973)
O3': (55.892,176.581,82.859)
OP1: (51.672,179.780,85.208)
OP2: (50.304,177.624,85.437)
C4: (51.615,172.392,86.016)
O5': (52.777,177.588,84.955)
C3': (55.103,176.034,83.889)
C1': (55.076,174.720,85.835)
O4': (54.763,176.060,86.196)
C5': (54.118,178.089,85.047)
P: (51.577,178.372,85.643)
O2: (55.047,171.988,85.806)
C4': (55.099,176.948,85.097)
C2': (55.724,174.767,84.453)
O2': (57.124,174.876,84.599)
N1: (53.835,173.920,85.863)
N3: (52.798,171.786,85.955)
N4: (50.533,171.632,86.129)
C6: (52.610,174.526,85.896)
C5: (51.488,173.807,85.973)
O3': (55.892,176.581,82.859)
C4: (54.312,168.177,85.089)
N3: (53.193,168.798,85.601)
OP1: (51.861,162.202,81.644)
OP2: (53.457,164.212,81.540)
C2: (52.014,168.203,85.980)
C1': (50.757,166.113,86.251)
C3': (49.511,165.431,84.368)
O5': (51.842,163.946,83.442)
O4': (50.980,164.726,86.073)
C5': (50.823,163.249,84.169)
P: (52.715,163.199,82.340)
C4': (50.075,164.207,85.068)
C2': (49.478,166.464,85.488)
O2': (48.377,166.306,86.359)
N1: (51.974,166.827,85.821)
O4: (55.308,168.851,84.823)
O2: (51.080,168.847,86.421)
C6: (53.056,166.149,85.291)
C5: (54.190,166.760,84.934)
O3': (48.228,165.149,83.820)
N3: (53.193,168.798,85.601)
OP1: (51.861,162.202,81.644)
OP2: (53.457,164.212,81.540)
C2: (52.014,168.203,85.980)
C1': (50.757,166.113,86.251)
C3': (49.511,165.431,84.368)
O5': (51.842,163.946,83.442)
O4': (50.980,164.726,86.073)
C5': (50.823,163.249,84.169)
P: (52.715,163.199,82.340)
C4': (50.075,164.207,85.068)
C2': (49.478,166.464,85.488)
O2': (48.377,166.306,86.359)
N1: (51.974,166.827,85.821)
O4: (55.308,168.851,84.823)
O2: (51.080,168.847,86.421)
C6: (53.056,166.149,85.291)
C5: (54.190,166.760,84.934)
O3': (48.228,165.149,83.820)
Image (generated by PyMOL):