Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:01353:01391
Extra
PDB:
ATOM 1 O3' A A1352 52.195 178.109 87.158 1.00 40.69 O
ATOM 2 P C A1353 51.818 178.183 85.604 1.00 42.70 P
ATOM 3 OP1 C A1353 51.921 179.603 85.207 1.00 43.72 O
ATOM 4 OP2 C A1353 50.539 177.444 85.384 1.00 41.63 O
ATOM 5 O5' C A1353 53.008 177.407 84.894 1.00 40.50 O
ATOM 6 C5' C A1353 54.348 177.901 84.993 1.00 39.09 C
ATOM 7 C4' C A1353 55.325 176.756 85.015 1.00 38.34 C
ATOM 8 O4' C A1353 55.006 175.865 86.113 1.00 38.77 O
ATOM 9 C3' C A1353 55.296 175.852 83.803 1.00 36.04 C
ATOM 10 O3' C A1353 56.070 176.389 82.763 1.00 37.56 O
ATOM 11 C2' C A1353 55.919 174.578 84.338 1.00 36.23 C
ATOM 12 O2' C A1353 57.327 174.668 84.431 1.00 34.73 O
ATOM 13 C1' C A1353 55.303 174.528 85.735 1.00 37.37 C
ATOM 14 N1 C A1353 54.058 173.742 85.784 1.00 36.52 N
ATOM 15 C2 C A1353 54.143 172.350 85.792 1.00 35.79 C
ATOM 16 O2 C A1353 55.259 171.820 85.716 1.00 38.20 O
ATOM 17 N3 C A1353 53.011 171.619 85.881 1.00 34.79 N
ATOM 18 C4 C A1353 51.831 172.228 85.959 1.00 34.14 C
ATOM 19 N4 C A1353 50.750 171.476 86.089 1.00 33.27 N
ATOM 20 C5 C A1353 51.710 173.644 85.921 1.00 36.85 C
ATOM 21 C6 C A1353 52.838 174.356 85.833 1.00 36.80 C
ATOM 22 P C A1354 56.146 175.623 81.366 1.00 37.87 P
ATOM 23 OP1 C A1354 54.939 174.778 81.244 1.00 39.63 O
ATOM 24 OP2 C A1354 57.485 174.994 81.293 1.00 37.81 O
ATOM 25 O5' C A1354 56.053 176.800 80.301 1.00 36.33 O
TER
ATOM 1 O3' C B1390 53.922 162.036 83.026 1.00 35.99 O
ATOM 2 P U B1391 52.875 162.980 82.263 1.00 35.55 P
ATOM 3 OP1 U B1391 51.917 162.091 81.561 1.00 35.79 O
ATOM 4 OP2 U B1391 53.657 163.973 81.482 1.00 34.21 O
ATOM 5 O5' U B1391 52.109 163.734 83.439 1.00 32.87 O
ATOM 6 C5' U B1391 51.051 163.088 84.170 1.00 34.72 C
ATOM 7 C4' U B1391 50.337 164.089 85.051 1.00 35.61 C
ATOM 8 O4' U B1391 51.290 164.642 85.995 1.00 37.16 O
ATOM 9 C3' U B1391 49.762 165.296 84.329 1.00 35.28 C
ATOM 10 O3' U B1391 48.457 165.027 83.816 1.00 35.86 O
ATOM 11 C2' U B1391 49.762 166.361 85.416 1.00 34.55 C
ATOM 12 O2' U B1391 48.677 166.229 86.306 1.00 34.32 O
ATOM 13 C1' U B1391 51.056 166.029 86.162 1.00 35.26 C
ATOM 14 N1 U B1391 52.258 166.760 85.714 1.00 37.05 N
ATOM 15 C2 U B1391 52.258 168.140 85.825 1.00 37.56 C
ATOM 16 O2 U B1391 51.305 168.766 86.246 1.00 39.92 O
ATOM 17 N3 U B1391 53.416 168.758 85.424 1.00 36.24 N
ATOM 18 C4 U B1391 54.550 168.158 84.935 1.00 37.59 C
ATOM 19 O4 U B1391 55.530 168.853 84.657 1.00 39.27 O
ATOM 20 C5 U B1391 54.475 166.734 84.833 1.00 37.03 C
ATOM 21 C6 U B1391 53.363 166.099 85.213 1.00 36.08 C
ATOM 22 P G B1392 48.098 165.411 82.294 1.00 37.07 P
ATOM 23 OP1 G B1392 46.728 164.903 82.004 1.00 34.64 O
ATOM 24 OP2 G B1392 49.237 165.001 81.432 1.00 36.08 O
ATOM 25 O5' G B1392 48.025 166.995 82.305 1.00 33.57 O
TER
ATOM 2 P C A1353 51.818 178.183 85.604 1.00 42.70 P
ATOM 3 OP1 C A1353 51.921 179.603 85.207 1.00 43.72 O
ATOM 4 OP2 C A1353 50.539 177.444 85.384 1.00 41.63 O
ATOM 5 O5' C A1353 53.008 177.407 84.894 1.00 40.50 O
ATOM 6 C5' C A1353 54.348 177.901 84.993 1.00 39.09 C
ATOM 7 C4' C A1353 55.325 176.756 85.015 1.00 38.34 C
ATOM 8 O4' C A1353 55.006 175.865 86.113 1.00 38.77 O
ATOM 9 C3' C A1353 55.296 175.852 83.803 1.00 36.04 C
ATOM 10 O3' C A1353 56.070 176.389 82.763 1.00 37.56 O
ATOM 11 C2' C A1353 55.919 174.578 84.338 1.00 36.23 C
ATOM 12 O2' C A1353 57.327 174.668 84.431 1.00 34.73 O
ATOM 13 C1' C A1353 55.303 174.528 85.735 1.00 37.37 C
ATOM 14 N1 C A1353 54.058 173.742 85.784 1.00 36.52 N
ATOM 15 C2 C A1353 54.143 172.350 85.792 1.00 35.79 C
ATOM 16 O2 C A1353 55.259 171.820 85.716 1.00 38.20 O
ATOM 17 N3 C A1353 53.011 171.619 85.881 1.00 34.79 N
ATOM 18 C4 C A1353 51.831 172.228 85.959 1.00 34.14 C
ATOM 19 N4 C A1353 50.750 171.476 86.089 1.00 33.27 N
ATOM 20 C5 C A1353 51.710 173.644 85.921 1.00 36.85 C
ATOM 21 C6 C A1353 52.838 174.356 85.833 1.00 36.80 C
ATOM 22 P C A1354 56.146 175.623 81.366 1.00 37.87 P
ATOM 23 OP1 C A1354 54.939 174.778 81.244 1.00 39.63 O
ATOM 24 OP2 C A1354 57.485 174.994 81.293 1.00 37.81 O
ATOM 25 O5' C A1354 56.053 176.800 80.301 1.00 36.33 O
TER
ATOM 1 O3' C B1390 53.922 162.036 83.026 1.00 35.99 O
ATOM 2 P U B1391 52.875 162.980 82.263 1.00 35.55 P
ATOM 3 OP1 U B1391 51.917 162.091 81.561 1.00 35.79 O
ATOM 4 OP2 U B1391 53.657 163.973 81.482 1.00 34.21 O
ATOM 5 O5' U B1391 52.109 163.734 83.439 1.00 32.87 O
ATOM 6 C5' U B1391 51.051 163.088 84.170 1.00 34.72 C
ATOM 7 C4' U B1391 50.337 164.089 85.051 1.00 35.61 C
ATOM 8 O4' U B1391 51.290 164.642 85.995 1.00 37.16 O
ATOM 9 C3' U B1391 49.762 165.296 84.329 1.00 35.28 C
ATOM 10 O3' U B1391 48.457 165.027 83.816 1.00 35.86 O
ATOM 11 C2' U B1391 49.762 166.361 85.416 1.00 34.55 C
ATOM 12 O2' U B1391 48.677 166.229 86.306 1.00 34.32 O
ATOM 13 C1' U B1391 51.056 166.029 86.162 1.00 35.26 C
ATOM 14 N1 U B1391 52.258 166.760 85.714 1.00 37.05 N
ATOM 15 C2 U B1391 52.258 168.140 85.825 1.00 37.56 C
ATOM 16 O2 U B1391 51.305 168.766 86.246 1.00 39.92 O
ATOM 17 N3 U B1391 53.416 168.758 85.424 1.00 36.24 N
ATOM 18 C4 U B1391 54.550 168.158 84.935 1.00 37.59 C
ATOM 19 O4 U B1391 55.530 168.853 84.657 1.00 39.27 O
ATOM 20 C5 U B1391 54.475 166.734 84.833 1.00 37.03 C
ATOM 21 C6 U B1391 53.363 166.099 85.213 1.00 36.08 C
ATOM 22 P G B1392 48.098 165.411 82.294 1.00 37.07 P
ATOM 23 OP1 G B1392 46.728 164.903 82.004 1.00 34.64 O
ATOM 24 OP2 G B1392 49.237 165.001 81.432 1.00 36.08 O
ATOM 25 O5' G B1392 48.025 166.995 82.305 1.00 33.57 O
TER
Atoms:
C2: (54.143,172.350,85.792)
OP1: (51.921,179.603,85.207)
OP2: (50.539,177.444,85.384)
C4: (51.831,172.228,85.959)
O5': (53.008,177.407,84.894)
C3': (55.296,175.852,83.803)
C1': (55.303,174.528,85.735)
O4': (55.006,175.865,86.113)
C5': (54.348,177.901,84.993)
P: (51.818,178.183,85.604)
O2: (55.259,171.820,85.716)
C4': (55.325,176.756,85.015)
C2': (55.919,174.578,84.338)
O2': (57.327,174.668,84.431)
N1: (54.058,173.742,85.784)
N3: (53.011,171.619,85.881)
N4: (50.750,171.476,86.089)
C6: (52.838,174.356,85.833)
C5: (51.710,173.644,85.921)
O3': (56.070,176.389,82.763)
OP1: (51.921,179.603,85.207)
OP2: (50.539,177.444,85.384)
C4: (51.831,172.228,85.959)
O5': (53.008,177.407,84.894)
C3': (55.296,175.852,83.803)
C1': (55.303,174.528,85.735)
O4': (55.006,175.865,86.113)
C5': (54.348,177.901,84.993)
P: (51.818,178.183,85.604)
O2: (55.259,171.820,85.716)
C4': (55.325,176.756,85.015)
C2': (55.919,174.578,84.338)
O2': (57.327,174.668,84.431)
N1: (54.058,173.742,85.784)
N3: (53.011,171.619,85.881)
N4: (50.750,171.476,86.089)
C6: (52.838,174.356,85.833)
C5: (51.710,173.644,85.921)
O3': (56.070,176.389,82.763)
C4: (54.550,168.158,84.935)
N3: (53.416,168.758,85.424)
OP1: (51.917,162.091,81.561)
OP2: (53.657,163.973,81.482)
C2: (52.258,168.140,85.825)
C1': (51.056,166.029,86.162)
C3': (49.762,165.296,84.329)
O5': (52.109,163.734,83.439)
O4': (51.290,164.642,85.995)
C5': (51.051,163.088,84.170)
P: (52.875,162.980,82.263)
C4': (50.337,164.089,85.051)
C2': (49.762,166.361,85.416)
O2': (48.677,166.229,86.306)
N1: (52.258,166.760,85.714)
O4: (55.530,168.853,84.657)
O2: (51.305,168.766,86.246)
C6: (53.363,166.099,85.213)
C5: (54.475,166.734,84.833)
O3': (48.457,165.027,83.816)
N3: (53.416,168.758,85.424)
OP1: (51.917,162.091,81.561)
OP2: (53.657,163.973,81.482)
C2: (52.258,168.140,85.825)
C1': (51.056,166.029,86.162)
C3': (49.762,165.296,84.329)
O5': (52.109,163.734,83.439)
O4': (51.290,164.642,85.995)
C5': (51.051,163.088,84.170)
P: (52.875,162.980,82.263)
C4': (50.337,164.089,85.051)
C2': (49.762,166.361,85.416)
O2': (48.677,166.229,86.306)
N1: (52.258,166.760,85.714)
O4: (55.530,168.853,84.657)
O2: (51.305,168.766,86.246)
C6: (53.363,166.099,85.213)
C5: (54.475,166.734,84.833)
O3': (48.457,165.027,83.816)
Image (generated by PyMOL):