Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01353:01391
Extra
PDB:
ATOM 1 O3' A A1352 52.241 178.494 87.510 1.00 48.27 O
ATOM 2 P C A1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 3 OP1 C A1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 4 OP2 C A1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 5 O5' C A1353 52.958 177.909 85.183 1.00 48.07 O
ATOM 6 C5' C A1353 54.311 178.384 85.298 1.00 44.96 C
ATOM 7 C4' C A1353 55.279 177.227 85.311 1.00 42.84 C
ATOM 8 O4' C A1353 54.963 176.324 86.400 1.00 41.75 O
ATOM 9 C3' C A1353 55.252 176.336 84.089 1.00 41.81 C
ATOM 10 O3' C A1353 56.022 176.887 83.046 1.00 41.42 O
ATOM 11 C2' C A1353 55.867 175.048 84.613 1.00 42.62 C
ATOM 12 O2' C A1353 57.282 175.116 84.693 1.00 43.61 O
ATOM 13 C1' C A1353 55.269 174.990 86.018 1.00 41.56 C
ATOM 14 N1 C A1353 54.041 174.177 86.109 1.00 41.19 N
ATOM 15 C2 C A1353 54.148 172.783 86.128 1.00 42.53 C
ATOM 16 O2 C A1353 55.265 172.265 86.037 1.00 45.38 O
ATOM 17 N3 C A1353 53.031 172.034 86.245 1.00 43.10 N
ATOM 18 C4 C A1353 51.843 172.626 86.340 1.00 42.65 C
ATOM 19 N4 C A1353 50.771 171.856 86.486 1.00 41.36 N
ATOM 20 C5 C A1353 51.701 174.040 86.300 1.00 43.89 C
ATOM 21 C6 C A1353 52.814 174.769 86.185 1.00 42.81 C
ATOM 22 P C A1354 56.137 176.103 81.658 1.00 42.98 P
ATOM 23 OP1 C A1354 54.888 175.336 81.452 1.00 44.31 O
ATOM 24 OP2 C A1354 57.432 175.388 81.666 1.00 43.47 O
ATOM 25 O5' C A1354 56.189 177.276 80.587 1.00 42.62 O
TER
ATOM 1 O3' C B1390 53.787 162.492 83.432 1.00 47.50 O
ATOM 2 P U B1391 52.712 163.352 82.608 1.00 47.14 P
ATOM 3 OP1 U B1391 51.795 162.362 81.979 1.00 45.74 O
ATOM 4 OP2 U B1391 53.435 164.329 81.751 1.00 45.24 O
ATOM 5 O5' U B1391 51.930 164.150 83.741 1.00 45.73 O
ATOM 6 C5' U B1391 50.937 163.498 84.553 1.00 46.47 C
ATOM 7 C4' U B1391 50.240 164.505 85.433 1.00 46.46 C
ATOM 8 O4' U B1391 51.196 165.040 86.381 1.00 45.98 O
ATOM 9 C3' U B1391 49.692 165.721 84.704 1.00 47.15 C
ATOM 10 O3' U B1391 48.396 165.467 84.162 1.00 48.06 O
ATOM 11 C2' U B1391 49.687 166.776 85.801 1.00 46.25 C
ATOM 12 O2' U B1391 48.588 166.631 86.680 1.00 45.71 O
ATOM 13 C1' U B1391 50.978 166.429 86.550 1.00 45.46 C
ATOM 14 N1 U B1391 52.182 167.143 86.084 1.00 45.04 N
ATOM 15 C2 U B1391 52.230 168.512 86.260 1.00 45.97 C
ATOM 16 O2 U B1391 51.318 169.142 86.765 1.00 48.35 O
ATOM 17 N3 U B1391 53.383 169.118 85.821 1.00 44.65 N
ATOM 18 C4 U B1391 54.468 168.506 85.233 1.00 44.80 C
ATOM 19 O4 U B1391 55.417 169.191 84.853 1.00 45.51 O
ATOM 20 C5 U B1391 54.345 167.093 85.084 1.00 43.87 C
ATOM 21 C6 U B1391 53.237 166.475 85.499 1.00 43.71 C
ATOM 22 P G B1392 48.079 165.839 82.624 1.00 49.85 P
ATOM 23 OP1 G B1392 46.726 165.289 82.319 1.00 47.42 O
ATOM 24 OP2 G B1392 49.237 165.460 81.765 1.00 48.79 O
ATOM 25 O5' G B1392 48.004 167.426 82.624 1.00 45.45 O
TER
ATOM 2 P C A1353 51.783 178.624 85.985 1.00 49.64 P
ATOM 3 OP1 C A1353 51.812 180.064 85.653 1.00 49.90 O
ATOM 4 OP2 C A1353 50.518 177.856 85.817 1.00 49.82 O
ATOM 5 O5' C A1353 52.958 177.909 85.183 1.00 48.07 O
ATOM 6 C5' C A1353 54.311 178.384 85.298 1.00 44.96 C
ATOM 7 C4' C A1353 55.279 177.227 85.311 1.00 42.84 C
ATOM 8 O4' C A1353 54.963 176.324 86.400 1.00 41.75 O
ATOM 9 C3' C A1353 55.252 176.336 84.089 1.00 41.81 C
ATOM 10 O3' C A1353 56.022 176.887 83.046 1.00 41.42 O
ATOM 11 C2' C A1353 55.867 175.048 84.613 1.00 42.62 C
ATOM 12 O2' C A1353 57.282 175.116 84.693 1.00 43.61 O
ATOM 13 C1' C A1353 55.269 174.990 86.018 1.00 41.56 C
ATOM 14 N1 C A1353 54.041 174.177 86.109 1.00 41.19 N
ATOM 15 C2 C A1353 54.148 172.783 86.128 1.00 42.53 C
ATOM 16 O2 C A1353 55.265 172.265 86.037 1.00 45.38 O
ATOM 17 N3 C A1353 53.031 172.034 86.245 1.00 43.10 N
ATOM 18 C4 C A1353 51.843 172.626 86.340 1.00 42.65 C
ATOM 19 N4 C A1353 50.771 171.856 86.486 1.00 41.36 N
ATOM 20 C5 C A1353 51.701 174.040 86.300 1.00 43.89 C
ATOM 21 C6 C A1353 52.814 174.769 86.185 1.00 42.81 C
ATOM 22 P C A1354 56.137 176.103 81.658 1.00 42.98 P
ATOM 23 OP1 C A1354 54.888 175.336 81.452 1.00 44.31 O
ATOM 24 OP2 C A1354 57.432 175.388 81.666 1.00 43.47 O
ATOM 25 O5' C A1354 56.189 177.276 80.587 1.00 42.62 O
TER
ATOM 1 O3' C B1390 53.787 162.492 83.432 1.00 47.50 O
ATOM 2 P U B1391 52.712 163.352 82.608 1.00 47.14 P
ATOM 3 OP1 U B1391 51.795 162.362 81.979 1.00 45.74 O
ATOM 4 OP2 U B1391 53.435 164.329 81.751 1.00 45.24 O
ATOM 5 O5' U B1391 51.930 164.150 83.741 1.00 45.73 O
ATOM 6 C5' U B1391 50.937 163.498 84.553 1.00 46.47 C
ATOM 7 C4' U B1391 50.240 164.505 85.433 1.00 46.46 C
ATOM 8 O4' U B1391 51.196 165.040 86.381 1.00 45.98 O
ATOM 9 C3' U B1391 49.692 165.721 84.704 1.00 47.15 C
ATOM 10 O3' U B1391 48.396 165.467 84.162 1.00 48.06 O
ATOM 11 C2' U B1391 49.687 166.776 85.801 1.00 46.25 C
ATOM 12 O2' U B1391 48.588 166.631 86.680 1.00 45.71 O
ATOM 13 C1' U B1391 50.978 166.429 86.550 1.00 45.46 C
ATOM 14 N1 U B1391 52.182 167.143 86.084 1.00 45.04 N
ATOM 15 C2 U B1391 52.230 168.512 86.260 1.00 45.97 C
ATOM 16 O2 U B1391 51.318 169.142 86.765 1.00 48.35 O
ATOM 17 N3 U B1391 53.383 169.118 85.821 1.00 44.65 N
ATOM 18 C4 U B1391 54.468 168.506 85.233 1.00 44.80 C
ATOM 19 O4 U B1391 55.417 169.191 84.853 1.00 45.51 O
ATOM 20 C5 U B1391 54.345 167.093 85.084 1.00 43.87 C
ATOM 21 C6 U B1391 53.237 166.475 85.499 1.00 43.71 C
ATOM 22 P G B1392 48.079 165.839 82.624 1.00 49.85 P
ATOM 23 OP1 G B1392 46.726 165.289 82.319 1.00 47.42 O
ATOM 24 OP2 G B1392 49.237 165.460 81.765 1.00 48.79 O
ATOM 25 O5' G B1392 48.004 167.426 82.624 1.00 45.45 O
TER
Atoms:
C2: (54.148,172.783,86.128)
OP1: (51.812,180.064,85.653)
OP2: (50.518,177.856,85.817)
C4: (51.843,172.626,86.340)
O5': (52.958,177.909,85.183)
C3': (55.252,176.336,84.089)
C1': (55.269,174.990,86.018)
O4': (54.963,176.324,86.400)
C5': (54.311,178.384,85.298)
P: (51.783,178.624,85.985)
O2: (55.265,172.265,86.037)
C4': (55.279,177.227,85.311)
C2': (55.867,175.048,84.613)
O2': (57.282,175.116,84.693)
N1: (54.041,174.177,86.109)
N3: (53.031,172.034,86.245)
N4: (50.771,171.856,86.486)
C6: (52.814,174.769,86.185)
C5: (51.701,174.040,86.300)
O3': (56.022,176.887,83.046)
OP1: (51.812,180.064,85.653)
OP2: (50.518,177.856,85.817)
C4: (51.843,172.626,86.340)
O5': (52.958,177.909,85.183)
C3': (55.252,176.336,84.089)
C1': (55.269,174.990,86.018)
O4': (54.963,176.324,86.400)
C5': (54.311,178.384,85.298)
P: (51.783,178.624,85.985)
O2: (55.265,172.265,86.037)
C4': (55.279,177.227,85.311)
C2': (55.867,175.048,84.613)
O2': (57.282,175.116,84.693)
N1: (54.041,174.177,86.109)
N3: (53.031,172.034,86.245)
N4: (50.771,171.856,86.486)
C6: (52.814,174.769,86.185)
C5: (51.701,174.040,86.300)
O3': (56.022,176.887,83.046)
C4: (54.468,168.506,85.233)
N3: (53.383,169.118,85.821)
OP1: (51.795,162.362,81.979)
OP2: (53.435,164.329,81.751)
C2: (52.230,168.512,86.260)
C1': (50.978,166.429,86.550)
C3': (49.692,165.721,84.704)
O5': (51.930,164.150,83.741)
O4': (51.196,165.040,86.381)
C5': (50.937,163.498,84.553)
P: (52.712,163.352,82.608)
C4': (50.240,164.505,85.433)
C2': (49.687,166.776,85.801)
O2': (48.588,166.631,86.680)
N1: (52.182,167.143,86.084)
O4: (55.417,169.191,84.853)
O2: (51.318,169.142,86.765)
C6: (53.237,166.475,85.499)
C5: (54.345,167.093,85.084)
O3': (48.396,165.467,84.162)
N3: (53.383,169.118,85.821)
OP1: (51.795,162.362,81.979)
OP2: (53.435,164.329,81.751)
C2: (52.230,168.512,86.260)
C1': (50.978,166.429,86.550)
C3': (49.692,165.721,84.704)
O5': (51.930,164.150,83.741)
O4': (51.196,165.040,86.381)
C5': (50.937,163.498,84.553)
P: (52.712,163.352,82.608)
C4': (50.240,164.505,85.433)
C2': (49.687,166.776,85.801)
O2': (48.588,166.631,86.680)
N1: (52.182,167.143,86.084)
O4: (55.417,169.191,84.853)
O2: (51.318,169.142,86.765)
C6: (53.237,166.475,85.499)
C5: (54.345,167.093,85.084)
O3': (48.396,165.467,84.162)
Image (generated by PyMOL):