Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01353:01391
Extra
PDB:
ATOM 1 O3' A A1352 51.947 178.401 87.174 1.00 47.33 O
ATOM 2 P C A1353 51.615 178.383 85.609 1.00 49.82 P
ATOM 3 OP1 C A1353 51.734 179.777 85.123 1.00 49.70 O
ATOM 4 OP2 C A1353 50.338 177.631 85.404 1.00 46.29 O
ATOM 5 O5' C A1353 52.828 177.562 84.989 1.00 46.51 O
ATOM 6 C5' C A1353 54.162 178.069 85.092 1.00 44.68 C
ATOM 7 C4' C A1353 55.155 176.939 85.090 1.00 43.61 C
ATOM 8 O4' C A1353 54.865 176.036 86.185 1.00 44.49 O
ATOM 9 C3' C A1353 55.150 176.043 83.869 1.00 41.41 C
ATOM 10 O3' C A1353 55.904 176.622 82.827 1.00 41.02 O
ATOM 11 C2' C A1353 55.804 174.780 84.405 1.00 42.86 C
ATOM 12 O2' C A1353 57.212 174.899 84.509 1.00 41.37 O
ATOM 13 C1' C A1353 55.190 174.707 85.804 1.00 43.26 C
ATOM 14 N1 C A1353 53.957 173.897 85.855 1.00 42.79 N
ATOM 15 C2 C A1353 54.053 172.511 85.738 1.00 41.88 C
ATOM 16 O2 C A1353 55.169 171.997 85.578 1.00 44.21 O
ATOM 17 N3 C A1353 52.930 171.766 85.797 1.00 40.82 N
ATOM 18 C4 C A1353 51.749 172.355 85.963 1.00 40.72 C
ATOM 19 N4 C A1353 50.673 171.586 86.029 1.00 42.06 N
ATOM 20 C5 C A1353 51.620 173.763 86.074 1.00 42.02 C
ATOM 21 C6 C A1353 52.736 174.489 86.017 1.00 42.79 C
ATOM 22 P C A1354 56.053 175.852 81.436 1.00 41.22 P
ATOM 23 OP1 C A1354 54.889 174.958 81.270 1.00 41.09 O
ATOM 24 OP2 C A1354 57.418 175.283 81.412 1.00 42.34 O
ATOM 25 O5' C A1354 55.965 177.014 80.353 1.00 40.03 O
TER
ATOM 1 O3' C B1390 53.791 162.318 83.172 1.00 42.94 O
ATOM 2 P U B1391 52.777 163.212 82.311 1.00 44.38 P
ATOM 3 OP1 U B1391 51.888 162.273 81.574 1.00 42.95 O
ATOM 4 OP2 U B1391 53.577 164.210 81.552 1.00 43.78 O
ATOM 5 O5' U B1391 51.913 163.969 83.412 1.00 41.93 O
ATOM 6 C5' U B1391 50.882 163.275 84.138 1.00 43.11 C
ATOM 7 C4' U B1391 50.141 164.234 85.033 1.00 43.16 C
ATOM 8 O4' U B1391 51.060 164.765 86.022 1.00 43.67 O
ATOM 9 C3' U B1391 49.581 165.449 84.318 1.00 42.46 C
ATOM 10 O3' U B1391 48.301 165.154 83.756 1.00 42.08 O
ATOM 11 C2' U B1391 49.547 166.492 85.430 1.00 42.62 C
ATOM 12 O2' U B1391 48.445 166.340 86.298 1.00 41.98 O
ATOM 13 C1' U B1391 50.823 166.147 86.206 1.00 42.78 C
ATOM 14 N1 U B1391 52.035 166.877 85.792 1.00 43.96 N
ATOM 15 C2 U B1391 52.072 168.245 85.993 1.00 44.61 C
ATOM 16 O2 U B1391 51.142 168.867 86.470 1.00 47.01 O
ATOM 17 N3 U B1391 53.240 168.860 85.613 1.00 42.67 N
ATOM 18 C4 U B1391 54.347 168.266 85.064 1.00 41.64 C
ATOM 19 O4 U B1391 55.339 168.948 84.823 1.00 41.64 O
ATOM 20 C5 U B1391 54.233 166.859 84.870 1.00 42.97 C
ATOM 21 C6 U B1391 53.111 166.226 85.230 1.00 43.35 C
ATOM 22 P G B1392 47.933 165.664 82.273 1.00 42.36 P
ATOM 23 OP1 G B1392 46.539 165.238 82.000 1.00 40.35 O
ATOM 24 OP2 G B1392 49.014 165.283 81.329 1.00 42.01 O
ATOM 25 O5' G B1392 47.938 167.246 82.398 1.00 41.44 O
TER
ATOM 2 P C A1353 51.615 178.383 85.609 1.00 49.82 P
ATOM 3 OP1 C A1353 51.734 179.777 85.123 1.00 49.70 O
ATOM 4 OP2 C A1353 50.338 177.631 85.404 1.00 46.29 O
ATOM 5 O5' C A1353 52.828 177.562 84.989 1.00 46.51 O
ATOM 6 C5' C A1353 54.162 178.069 85.092 1.00 44.68 C
ATOM 7 C4' C A1353 55.155 176.939 85.090 1.00 43.61 C
ATOM 8 O4' C A1353 54.865 176.036 86.185 1.00 44.49 O
ATOM 9 C3' C A1353 55.150 176.043 83.869 1.00 41.41 C
ATOM 10 O3' C A1353 55.904 176.622 82.827 1.00 41.02 O
ATOM 11 C2' C A1353 55.804 174.780 84.405 1.00 42.86 C
ATOM 12 O2' C A1353 57.212 174.899 84.509 1.00 41.37 O
ATOM 13 C1' C A1353 55.190 174.707 85.804 1.00 43.26 C
ATOM 14 N1 C A1353 53.957 173.897 85.855 1.00 42.79 N
ATOM 15 C2 C A1353 54.053 172.511 85.738 1.00 41.88 C
ATOM 16 O2 C A1353 55.169 171.997 85.578 1.00 44.21 O
ATOM 17 N3 C A1353 52.930 171.766 85.797 1.00 40.82 N
ATOM 18 C4 C A1353 51.749 172.355 85.963 1.00 40.72 C
ATOM 19 N4 C A1353 50.673 171.586 86.029 1.00 42.06 N
ATOM 20 C5 C A1353 51.620 173.763 86.074 1.00 42.02 C
ATOM 21 C6 C A1353 52.736 174.489 86.017 1.00 42.79 C
ATOM 22 P C A1354 56.053 175.852 81.436 1.00 41.22 P
ATOM 23 OP1 C A1354 54.889 174.958 81.270 1.00 41.09 O
ATOM 24 OP2 C A1354 57.418 175.283 81.412 1.00 42.34 O
ATOM 25 O5' C A1354 55.965 177.014 80.353 1.00 40.03 O
TER
ATOM 1 O3' C B1390 53.791 162.318 83.172 1.00 42.94 O
ATOM 2 P U B1391 52.777 163.212 82.311 1.00 44.38 P
ATOM 3 OP1 U B1391 51.888 162.273 81.574 1.00 42.95 O
ATOM 4 OP2 U B1391 53.577 164.210 81.552 1.00 43.78 O
ATOM 5 O5' U B1391 51.913 163.969 83.412 1.00 41.93 O
ATOM 6 C5' U B1391 50.882 163.275 84.138 1.00 43.11 C
ATOM 7 C4' U B1391 50.141 164.234 85.033 1.00 43.16 C
ATOM 8 O4' U B1391 51.060 164.765 86.022 1.00 43.67 O
ATOM 9 C3' U B1391 49.581 165.449 84.318 1.00 42.46 C
ATOM 10 O3' U B1391 48.301 165.154 83.756 1.00 42.08 O
ATOM 11 C2' U B1391 49.547 166.492 85.430 1.00 42.62 C
ATOM 12 O2' U B1391 48.445 166.340 86.298 1.00 41.98 O
ATOM 13 C1' U B1391 50.823 166.147 86.206 1.00 42.78 C
ATOM 14 N1 U B1391 52.035 166.877 85.792 1.00 43.96 N
ATOM 15 C2 U B1391 52.072 168.245 85.993 1.00 44.61 C
ATOM 16 O2 U B1391 51.142 168.867 86.470 1.00 47.01 O
ATOM 17 N3 U B1391 53.240 168.860 85.613 1.00 42.67 N
ATOM 18 C4 U B1391 54.347 168.266 85.064 1.00 41.64 C
ATOM 19 O4 U B1391 55.339 168.948 84.823 1.00 41.64 O
ATOM 20 C5 U B1391 54.233 166.859 84.870 1.00 42.97 C
ATOM 21 C6 U B1391 53.111 166.226 85.230 1.00 43.35 C
ATOM 22 P G B1392 47.933 165.664 82.273 1.00 42.36 P
ATOM 23 OP1 G B1392 46.539 165.238 82.000 1.00 40.35 O
ATOM 24 OP2 G B1392 49.014 165.283 81.329 1.00 42.01 O
ATOM 25 O5' G B1392 47.938 167.246 82.398 1.00 41.44 O
TER
Atoms:
C2: (54.053,172.511,85.738)
OP1: (51.734,179.777,85.123)
OP2: (50.338,177.631,85.404)
C4: (51.749,172.355,85.963)
O5': (52.828,177.562,84.989)
C3': (55.150,176.043,83.869)
C1': (55.190,174.707,85.804)
O4': (54.865,176.036,86.185)
C5': (54.162,178.069,85.092)
P: (51.615,178.383,85.609)
O2: (55.169,171.997,85.578)
C4': (55.155,176.939,85.090)
C2': (55.804,174.780,84.405)
O2': (57.212,174.899,84.509)
N1: (53.957,173.897,85.855)
N3: (52.930,171.766,85.797)
N4: (50.673,171.586,86.029)
C6: (52.736,174.489,86.017)
C5: (51.620,173.763,86.074)
O3': (55.904,176.622,82.827)
OP1: (51.734,179.777,85.123)
OP2: (50.338,177.631,85.404)
C4: (51.749,172.355,85.963)
O5': (52.828,177.562,84.989)
C3': (55.150,176.043,83.869)
C1': (55.190,174.707,85.804)
O4': (54.865,176.036,86.185)
C5': (54.162,178.069,85.092)
P: (51.615,178.383,85.609)
O2: (55.169,171.997,85.578)
C4': (55.155,176.939,85.090)
C2': (55.804,174.780,84.405)
O2': (57.212,174.899,84.509)
N1: (53.957,173.897,85.855)
N3: (52.930,171.766,85.797)
N4: (50.673,171.586,86.029)
C6: (52.736,174.489,86.017)
C5: (51.620,173.763,86.074)
O3': (55.904,176.622,82.827)
C4: (54.347,168.266,85.064)
N3: (53.240,168.860,85.613)
OP1: (51.888,162.273,81.574)
OP2: (53.577,164.210,81.552)
C2: (52.072,168.245,85.993)
C1': (50.823,166.147,86.206)
C3': (49.581,165.449,84.318)
O5': (51.913,163.969,83.412)
O4': (51.060,164.765,86.022)
C5': (50.882,163.275,84.138)
P: (52.777,163.212,82.311)
C4': (50.141,164.234,85.033)
C2': (49.547,166.492,85.430)
O2': (48.445,166.340,86.298)
N1: (52.035,166.877,85.792)
O4: (55.339,168.948,84.823)
O2: (51.142,168.867,86.470)
C6: (53.111,166.226,85.230)
C5: (54.233,166.859,84.870)
O3': (48.301,165.154,83.756)
N3: (53.240,168.860,85.613)
OP1: (51.888,162.273,81.574)
OP2: (53.577,164.210,81.552)
C2: (52.072,168.245,85.993)
C1': (50.823,166.147,86.206)
C3': (49.581,165.449,84.318)
O5': (51.913,163.969,83.412)
O4': (51.060,164.765,86.022)
C5': (50.882,163.275,84.138)
P: (52.777,163.212,82.311)
C4': (50.141,164.234,85.033)
C2': (49.547,166.492,85.430)
O2': (48.445,166.340,86.298)
N1: (52.035,166.877,85.792)
O4: (55.339,168.948,84.823)
O2: (51.142,168.867,86.470)
C6: (53.111,166.226,85.230)
C5: (54.233,166.859,84.870)
O3': (48.301,165.154,83.756)
Image (generated by PyMOL):