Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0104:0103
Extra
PDB:
ATOM 1 O3' A A 103 78.574 141.852 36.016 1.00 45.67 O
ATOM 2 P A A 104 80.054 142.354 35.652 1.00 46.64 P
ATOM 3 OP1 A A 104 80.668 141.390 34.693 1.00 44.70 O
ATOM 4 OP2 A A 104 80.760 142.680 36.912 1.00 46.31 O
ATOM 5 O5' A A 104 79.793 143.712 34.874 1.00 45.95 O
ATOM 6 C5' A A 104 79.466 144.915 35.569 1.00 45.70 C
ATOM 7 C4' A A 104 79.385 146.046 34.583 1.00 47.10 C
ATOM 8 O4' A A 104 78.234 145.842 33.714 1.00 46.77 O
ATOM 9 C3' A A 104 79.235 147.442 35.174 1.00 47.23 C
ATOM 10 O3' A A 104 79.899 148.371 34.319 1.00 49.13 O
ATOM 11 C2' A A 104 77.736 147.675 35.045 1.00 47.69 C
ATOM 12 O2' A A 104 77.366 149.037 35.027 1.00 49.17 O
ATOM 13 C1' A A 104 77.470 147.024 33.690 1.00 48.11 C
ATOM 14 N9 A A 104 76.070 146.701 33.425 1.00 47.67 N
ATOM 15 C8 A A 104 75.256 145.817 34.074 1.00 49.15 C
ATOM 16 N7 A A 104 74.022 145.818 33.636 1.00 50.35 N
ATOM 17 C5 A A 104 74.028 146.752 32.616 1.00 48.08 C
ATOM 18 C6 A A 104 73.017 147.229 31.760 1.00 48.77 C
ATOM 19 N6 A A 104 71.755 146.802 31.784 1.00 47.60 N
ATOM 20 N1 A A 104 73.354 148.174 30.862 1.00 49.78 N
ATOM 21 C2 A A 104 74.622 148.594 30.824 1.00 51.17 C
ATOM 22 N3 A A 104 75.662 148.215 31.568 1.00 49.90 N
ATOM 23 C4 A A 104 75.289 147.287 32.460 1.00 48.21 C
ATOM 24 P U A 105 81.509 148.478 34.314 1.00 51.68 P
ATOM 25 OP1 U A 105 82.147 147.142 34.531 1.00 48.76 O
ATOM 26 OP2 U A 105 81.867 149.613 35.200 1.00 50.89 O
ATOM 27 O5' U A 105 81.793 148.932 32.814 1.00 53.56 O
TER
ATOM 1 O3' G B 102 74.861 145.441 38.461 1.00 44.72 O
ATOM 2 P A B 103 76.286 144.918 37.973 1.00 46.07 P
ATOM 3 OP1 A B 103 76.786 144.051 39.066 1.00 44.26 O
ATOM 4 OP2 A B 103 77.068 146.101 37.558 1.00 45.42 O
ATOM 5 O5' A B 103 75.977 144.010 36.697 1.00 45.97 O
ATOM 6 C5' A B 103 75.605 142.625 36.861 1.00 47.98 C
ATOM 7 C4' A B 103 76.172 141.762 35.749 1.00 47.68 C
ATOM 8 O4' A B 103 75.291 141.719 34.598 1.00 49.54 O
ATOM 9 C3' A B 103 77.497 142.178 35.157 1.00 46.46 C
ATOM 10 O3' A B 103 78.574 141.852 36.016 1.00 45.67 O
ATOM 11 C2' A B 103 77.530 141.381 33.856 1.00 47.55 C
ATOM 12 O2' A B 103 77.962 140.053 34.055 1.00 45.37 O
ATOM 13 C1' A B 103 76.051 141.392 33.442 1.00 49.70 C
ATOM 14 N9 A B 103 75.675 142.315 32.359 1.00 52.77 N
ATOM 15 C8 A B 103 76.282 143.492 31.994 1.00 53.71 C
ATOM 16 N7 A B 103 75.679 144.114 31.008 1.00 54.21 N
ATOM 17 C5 A B 103 74.611 143.289 30.694 1.00 52.77 C
ATOM 18 C6 A B 103 73.587 143.391 29.739 1.00 53.13 C
ATOM 19 N6 A B 103 73.454 144.411 28.894 1.00 53.50 N
ATOM 20 N1 A B 103 72.685 142.395 29.681 1.00 53.51 N
ATOM 21 C2 A B 103 72.807 141.377 30.526 1.00 53.17 C
ATOM 22 N3 A B 103 73.716 141.167 31.469 1.00 53.82 N
ATOM 23 C4 A B 103 74.602 142.172 31.506 1.00 52.61 C
ATOM 24 P A B 104 80.054 142.354 35.652 1.00 46.64 P
ATOM 25 OP1 A B 104 80.668 141.390 34.693 1.00 44.70 O
ATOM 26 OP2 A B 104 80.760 142.680 36.912 1.00 46.31 O
ATOM 27 O5' A B 104 79.793 143.712 34.874 1.00 45.95 O
TER
ATOM 2 P A A 104 80.054 142.354 35.652 1.00 46.64 P
ATOM 3 OP1 A A 104 80.668 141.390 34.693 1.00 44.70 O
ATOM 4 OP2 A A 104 80.760 142.680 36.912 1.00 46.31 O
ATOM 5 O5' A A 104 79.793 143.712 34.874 1.00 45.95 O
ATOM 6 C5' A A 104 79.466 144.915 35.569 1.00 45.70 C
ATOM 7 C4' A A 104 79.385 146.046 34.583 1.00 47.10 C
ATOM 8 O4' A A 104 78.234 145.842 33.714 1.00 46.77 O
ATOM 9 C3' A A 104 79.235 147.442 35.174 1.00 47.23 C
ATOM 10 O3' A A 104 79.899 148.371 34.319 1.00 49.13 O
ATOM 11 C2' A A 104 77.736 147.675 35.045 1.00 47.69 C
ATOM 12 O2' A A 104 77.366 149.037 35.027 1.00 49.17 O
ATOM 13 C1' A A 104 77.470 147.024 33.690 1.00 48.11 C
ATOM 14 N9 A A 104 76.070 146.701 33.425 1.00 47.67 N
ATOM 15 C8 A A 104 75.256 145.817 34.074 1.00 49.15 C
ATOM 16 N7 A A 104 74.022 145.818 33.636 1.00 50.35 N
ATOM 17 C5 A A 104 74.028 146.752 32.616 1.00 48.08 C
ATOM 18 C6 A A 104 73.017 147.229 31.760 1.00 48.77 C
ATOM 19 N6 A A 104 71.755 146.802 31.784 1.00 47.60 N
ATOM 20 N1 A A 104 73.354 148.174 30.862 1.00 49.78 N
ATOM 21 C2 A A 104 74.622 148.594 30.824 1.00 51.17 C
ATOM 22 N3 A A 104 75.662 148.215 31.568 1.00 49.90 N
ATOM 23 C4 A A 104 75.289 147.287 32.460 1.00 48.21 C
ATOM 24 P U A 105 81.509 148.478 34.314 1.00 51.68 P
ATOM 25 OP1 U A 105 82.147 147.142 34.531 1.00 48.76 O
ATOM 26 OP2 U A 105 81.867 149.613 35.200 1.00 50.89 O
ATOM 27 O5' U A 105 81.793 148.932 32.814 1.00 53.56 O
TER
ATOM 1 O3' G B 102 74.861 145.441 38.461 1.00 44.72 O
ATOM 2 P A B 103 76.286 144.918 37.973 1.00 46.07 P
ATOM 3 OP1 A B 103 76.786 144.051 39.066 1.00 44.26 O
ATOM 4 OP2 A B 103 77.068 146.101 37.558 1.00 45.42 O
ATOM 5 O5' A B 103 75.977 144.010 36.697 1.00 45.97 O
ATOM 6 C5' A B 103 75.605 142.625 36.861 1.00 47.98 C
ATOM 7 C4' A B 103 76.172 141.762 35.749 1.00 47.68 C
ATOM 8 O4' A B 103 75.291 141.719 34.598 1.00 49.54 O
ATOM 9 C3' A B 103 77.497 142.178 35.157 1.00 46.46 C
ATOM 10 O3' A B 103 78.574 141.852 36.016 1.00 45.67 O
ATOM 11 C2' A B 103 77.530 141.381 33.856 1.00 47.55 C
ATOM 12 O2' A B 103 77.962 140.053 34.055 1.00 45.37 O
ATOM 13 C1' A B 103 76.051 141.392 33.442 1.00 49.70 C
ATOM 14 N9 A B 103 75.675 142.315 32.359 1.00 52.77 N
ATOM 15 C8 A B 103 76.282 143.492 31.994 1.00 53.71 C
ATOM 16 N7 A B 103 75.679 144.114 31.008 1.00 54.21 N
ATOM 17 C5 A B 103 74.611 143.289 30.694 1.00 52.77 C
ATOM 18 C6 A B 103 73.587 143.391 29.739 1.00 53.13 C
ATOM 19 N6 A B 103 73.454 144.411 28.894 1.00 53.50 N
ATOM 20 N1 A B 103 72.685 142.395 29.681 1.00 53.51 N
ATOM 21 C2 A B 103 72.807 141.377 30.526 1.00 53.17 C
ATOM 22 N3 A B 103 73.716 141.167 31.469 1.00 53.82 N
ATOM 23 C4 A B 103 74.602 142.172 31.506 1.00 52.61 C
ATOM 24 P A B 104 80.054 142.354 35.652 1.00 46.64 P
ATOM 25 OP1 A B 104 80.668 141.390 34.693 1.00 44.70 O
ATOM 26 OP2 A B 104 80.760 142.680 36.912 1.00 46.31 O
ATOM 27 O5' A B 104 79.793 143.712 34.874 1.00 45.95 O
TER
Atoms:
OP1: (80.668,141.390,34.693)
OP2: (80.760,142.680,36.912)
C3': (79.235,147.442,35.174)
C1': (77.470,147.024,33.690)
C5': (79.466,144.915,35.569)
O4': (78.234,145.842,33.714)
C8: (75.256,145.817,34.074)
O2': (77.366,149.037,35.027)
C6: (73.017,147.229,31.760)
C5: (74.028,146.752,32.616)
C4: (75.289,147.287,32.460)
P: (80.054,142.354,35.652)
C4': (79.385,146.046,34.583)
C2': (77.736,147.675,35.045)
C2: (74.622,148.594,30.824)
N1: (73.354,148.174,30.862)
N3: (75.662,148.215,31.568)
N6: (71.755,146.802,31.784)
N7: (74.022,145.818,33.636)
N9: (76.070,146.701,33.425)
O5': (79.793,143.712,34.874)
O3': (79.899,148.371,34.319)
OP2: (80.760,142.680,36.912)
C3': (79.235,147.442,35.174)
C1': (77.470,147.024,33.690)
C5': (79.466,144.915,35.569)
O4': (78.234,145.842,33.714)
C8: (75.256,145.817,34.074)
O2': (77.366,149.037,35.027)
C6: (73.017,147.229,31.760)
C5: (74.028,146.752,32.616)
C4: (75.289,147.287,32.460)
P: (80.054,142.354,35.652)
C4': (79.385,146.046,34.583)
C2': (77.736,147.675,35.045)
C2: (74.622,148.594,30.824)
N1: (73.354,148.174,30.862)
N3: (75.662,148.215,31.568)
N6: (71.755,146.802,31.784)
N7: (74.022,145.818,33.636)
N9: (76.070,146.701,33.425)
O5': (79.793,143.712,34.874)
O3': (79.899,148.371,34.319)
OP1: (76.786,144.051,39.066)
OP2: (77.068,146.101,37.558)
C3': (77.497,142.178,35.157)
C1': (76.051,141.392,33.442)
C5': (75.605,142.625,36.861)
O4': (75.291,141.719,34.598)
C8: (76.282,143.492,31.994)
O2': (77.962,140.053,34.055)
C6: (73.587,143.391,29.739)
C5: (74.611,143.289,30.694)
C4: (74.602,142.172,31.506)
P: (76.286,144.918,37.973)
C4': (76.172,141.762,35.749)
C2': (77.530,141.381,33.856)
C2: (72.807,141.377,30.526)
N1: (72.685,142.395,29.681)
N3: (73.716,141.167,31.469)
N6: (73.454,144.411,28.894)
N7: (75.679,144.114,31.008)
N9: (75.675,142.315,32.359)
O5': (75.977,144.010,36.697)
O3': (78.574,141.852,36.016)
OP2: (77.068,146.101,37.558)
C3': (77.497,142.178,35.157)
C1': (76.051,141.392,33.442)
C5': (75.605,142.625,36.861)
O4': (75.291,141.719,34.598)
C8: (76.282,143.492,31.994)
O2': (77.962,140.053,34.055)
C6: (73.587,143.391,29.739)
C5: (74.611,143.289,30.694)
C4: (74.602,142.172,31.506)
P: (76.286,144.918,37.973)
C4': (76.172,141.762,35.749)
C2': (77.530,141.381,33.856)
C2: (72.807,141.377,30.526)
N1: (72.685,142.395,29.681)
N3: (73.716,141.167,31.469)
N6: (73.454,144.411,28.894)
N7: (75.679,144.114,31.008)
N9: (75.675,142.315,32.359)
O5': (75.977,144.010,36.697)
O3': (78.574,141.852,36.016)
Image (generated by PyMOL):