Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQM:926:954
Extra
PDB:
ATOM 1 O3' C A 25 60.694 11.103 95.409 1.00 75.35 O
ATOM 2 P C A 26 62.259 11.460 95.298 1.00 74.22 P
ATOM 3 OP1 C A 26 62.473 12.065 93.953 1.00 73.03 O
ATOM 4 OP2 C A 26 63.056 10.276 95.706 1.00 74.64 O
ATOM 5 O5' C A 26 62.466 12.575 96.415 1.00 70.81 O
ATOM 6 C5' C A 26 61.820 13.849 96.302 1.00 68.66 C
ATOM 7 C4' C A 26 62.199 14.727 97.461 1.00 68.16 C
ATOM 8 O4' C A 26 61.604 14.222 98.687 1.00 68.72 O
ATOM 9 C3' C A 26 63.681 14.756 97.770 1.00 68.07 C
ATOM 10 O3' C A 26 64.414 15.588 96.887 1.00 67.79 O
ATOM 11 C2' C A 26 63.694 15.213 99.220 1.00 67.97 C
ATOM 12 O2' C A 26 63.475 16.602 99.368 1.00 67.50 O
ATOM 13 C1' C A 26 62.493 14.442 99.774 1.00 68.21 C
ATOM 14 N1 C A 26 62.876 13.134 100.344 1.00 67.84 N
ATOM 15 C2 C A 26 63.351 13.082 101.665 1.00 69.04 C
ATOM 16 O2 C A 26 63.433 14.135 102.324 1.00 70.45 O
ATOM 17 N3 C A 26 63.710 11.887 102.189 1.00 68.31 N
ATOM 18 C4 C A 26 63.610 10.779 101.454 1.00 68.81 C
ATOM 19 N4 C A 26 63.977 9.625 102.015 1.00 70.97 N
ATOM 20 C5 C A 26 63.130 10.803 100.112 1.00 67.21 C
ATOM 21 C6 C A 26 62.778 11.987 99.603 1.00 67.99 C
ATOM 22 P U A 27 66.007 15.411 96.785 1.00 68.29 P
ATOM 23 OP1 U A 27 66.508 16.243 95.661 1.00 68.66 O
ATOM 24 OP2 U A 27 66.328 13.960 96.820 1.00 67.37 O
ATOM 25 O5' U A 27 66.507 16.060 98.143 1.00 66.13 O
TER
ATOM 1 O3' A B 53 68.932 5.553 111.538 1.00 87.21 O
ATOM 2 P U B 54 67.380 5.344 111.914 1.00 86.30 P
ATOM 3 OP1 U B 54 67.345 4.869 113.319 1.00 86.14 O
ATOM 4 OP2 U B 54 66.705 4.556 110.845 1.00 84.74 O
ATOM 5 O5' U B 54 66.794 6.822 111.905 1.00 86.83 O
ATOM 6 C5' U B 54 67.592 7.899 112.418 1.00 86.71 C
ATOM 7 C4' U B 54 67.044 9.230 111.980 1.00 84.82 C
ATOM 8 O4' U B 54 66.984 9.279 110.526 1.00 82.95 O
ATOM 9 C3' U B 54 65.641 9.565 112.476 1.00 83.95 C
ATOM 10 O3' U B 54 65.669 10.874 113.024 1.00 83.72 O
ATOM 11 C2' U B 54 64.794 9.491 111.203 1.00 84.14 C
ATOM 12 O2' U B 54 63.674 10.354 111.206 1.00 86.45 O
ATOM 13 C1' U B 54 65.799 9.935 110.148 1.00 82.75 C
ATOM 14 N1 U B 54 65.466 9.567 108.763 1.00 80.62 N
ATOM 15 C2 U B 54 65.468 10.578 107.813 1.00 79.82 C
ATOM 16 O2 U B 54 65.730 11.743 108.076 1.00 78.72 O
ATOM 17 N3 U B 54 65.149 10.178 106.541 1.00 78.63 N
ATOM 18 C4 U B 54 64.823 8.907 106.127 1.00 78.73 C
ATOM 19 O4 U B 54 64.547 8.709 104.942 1.00 77.71 O
ATOM 20 C5 U B 54 64.843 7.921 107.162 1.00 79.13 C
ATOM 21 C6 U B 54 65.159 8.275 108.412 1.00 79.61 C
ATOM 22 P A B 55 66.124 11.078 114.556 1.00 85.65 P
ATOM 23 OP1 A B 55 66.150 9.738 115.205 1.00 86.20 O
ATOM 24 OP2 A B 55 65.325 12.175 115.171 1.00 85.01 O
ATOM 25 O5' A B 55 67.638 11.564 114.450 1.00 83.41 O
TER
ATOM 2 P C A 26 62.259 11.460 95.298 1.00 74.22 P
ATOM 3 OP1 C A 26 62.473 12.065 93.953 1.00 73.03 O
ATOM 4 OP2 C A 26 63.056 10.276 95.706 1.00 74.64 O
ATOM 5 O5' C A 26 62.466 12.575 96.415 1.00 70.81 O
ATOM 6 C5' C A 26 61.820 13.849 96.302 1.00 68.66 C
ATOM 7 C4' C A 26 62.199 14.727 97.461 1.00 68.16 C
ATOM 8 O4' C A 26 61.604 14.222 98.687 1.00 68.72 O
ATOM 9 C3' C A 26 63.681 14.756 97.770 1.00 68.07 C
ATOM 10 O3' C A 26 64.414 15.588 96.887 1.00 67.79 O
ATOM 11 C2' C A 26 63.694 15.213 99.220 1.00 67.97 C
ATOM 12 O2' C A 26 63.475 16.602 99.368 1.00 67.50 O
ATOM 13 C1' C A 26 62.493 14.442 99.774 1.00 68.21 C
ATOM 14 N1 C A 26 62.876 13.134 100.344 1.00 67.84 N
ATOM 15 C2 C A 26 63.351 13.082 101.665 1.00 69.04 C
ATOM 16 O2 C A 26 63.433 14.135 102.324 1.00 70.45 O
ATOM 17 N3 C A 26 63.710 11.887 102.189 1.00 68.31 N
ATOM 18 C4 C A 26 63.610 10.779 101.454 1.00 68.81 C
ATOM 19 N4 C A 26 63.977 9.625 102.015 1.00 70.97 N
ATOM 20 C5 C A 26 63.130 10.803 100.112 1.00 67.21 C
ATOM 21 C6 C A 26 62.778 11.987 99.603 1.00 67.99 C
ATOM 22 P U A 27 66.007 15.411 96.785 1.00 68.29 P
ATOM 23 OP1 U A 27 66.508 16.243 95.661 1.00 68.66 O
ATOM 24 OP2 U A 27 66.328 13.960 96.820 1.00 67.37 O
ATOM 25 O5' U A 27 66.507 16.060 98.143 1.00 66.13 O
TER
ATOM 1 O3' A B 53 68.932 5.553 111.538 1.00 87.21 O
ATOM 2 P U B 54 67.380 5.344 111.914 1.00 86.30 P
ATOM 3 OP1 U B 54 67.345 4.869 113.319 1.00 86.14 O
ATOM 4 OP2 U B 54 66.705 4.556 110.845 1.00 84.74 O
ATOM 5 O5' U B 54 66.794 6.822 111.905 1.00 86.83 O
ATOM 6 C5' U B 54 67.592 7.899 112.418 1.00 86.71 C
ATOM 7 C4' U B 54 67.044 9.230 111.980 1.00 84.82 C
ATOM 8 O4' U B 54 66.984 9.279 110.526 1.00 82.95 O
ATOM 9 C3' U B 54 65.641 9.565 112.476 1.00 83.95 C
ATOM 10 O3' U B 54 65.669 10.874 113.024 1.00 83.72 O
ATOM 11 C2' U B 54 64.794 9.491 111.203 1.00 84.14 C
ATOM 12 O2' U B 54 63.674 10.354 111.206 1.00 86.45 O
ATOM 13 C1' U B 54 65.799 9.935 110.148 1.00 82.75 C
ATOM 14 N1 U B 54 65.466 9.567 108.763 1.00 80.62 N
ATOM 15 C2 U B 54 65.468 10.578 107.813 1.00 79.82 C
ATOM 16 O2 U B 54 65.730 11.743 108.076 1.00 78.72 O
ATOM 17 N3 U B 54 65.149 10.178 106.541 1.00 78.63 N
ATOM 18 C4 U B 54 64.823 8.907 106.127 1.00 78.73 C
ATOM 19 O4 U B 54 64.547 8.709 104.942 1.00 77.71 O
ATOM 20 C5 U B 54 64.843 7.921 107.162 1.00 79.13 C
ATOM 21 C6 U B 54 65.159 8.275 108.412 1.00 79.61 C
ATOM 22 P A B 55 66.124 11.078 114.556 1.00 85.65 P
ATOM 23 OP1 A B 55 66.150 9.738 115.205 1.00 86.20 O
ATOM 24 OP2 A B 55 65.325 12.175 115.171 1.00 85.01 O
ATOM 25 O5' A B 55 67.638 11.564 114.450 1.00 83.41 O
TER
Atoms:
C2: (63.351,13.082,101.665)
OP1: (62.473,12.065,93.953)
OP2: (63.056,10.276,95.706)
C4: (63.610,10.779,101.454)
O5': (62.466,12.575,96.415)
C3': (63.681,14.756,97.770)
C1': (62.493,14.442,99.774)
O4': (61.604,14.222,98.687)
C5': (61.820,13.849,96.302)
P: (62.259,11.460,95.298)
O2: (63.433,14.135,102.324)
C4': (62.199,14.727,97.461)
C2': (63.694,15.213,99.220)
O2': (63.475,16.602,99.368)
N1: (62.876,13.134,100.344)
N3: (63.710,11.887,102.189)
N4: (63.977,9.625,102.015)
C6: (62.778,11.987,99.603)
C5: (63.130,10.803,100.112)
O3': (64.414,15.588,96.887)
OP1: (62.473,12.065,93.953)
OP2: (63.056,10.276,95.706)
C4: (63.610,10.779,101.454)
O5': (62.466,12.575,96.415)
C3': (63.681,14.756,97.770)
C1': (62.493,14.442,99.774)
O4': (61.604,14.222,98.687)
C5': (61.820,13.849,96.302)
P: (62.259,11.460,95.298)
O2: (63.433,14.135,102.324)
C4': (62.199,14.727,97.461)
C2': (63.694,15.213,99.220)
O2': (63.475,16.602,99.368)
N1: (62.876,13.134,100.344)
N3: (63.710,11.887,102.189)
N4: (63.977,9.625,102.015)
C6: (62.778,11.987,99.603)
C5: (63.130,10.803,100.112)
O3': (64.414,15.588,96.887)
C4: (64.823,8.907,106.127)
N3: (65.149,10.178,106.541)
OP1: (67.345,4.869,113.319)
OP2: (66.705,4.556,110.845)
C2: (65.468,10.578,107.813)
C1': (65.799,9.935,110.148)
C3': (65.641,9.565,112.476)
O5': (66.794,6.822,111.905)
O4': (66.984,9.279,110.526)
C5': (67.592,7.899,112.418)
P: (67.380,5.344,111.914)
C4': (67.044,9.230,111.980)
C2': (64.794,9.491,111.203)
O2': (63.674,10.354,111.206)
N1: (65.466,9.567,108.763)
O4: (64.547,8.709,104.942)
O2: (65.730,11.743,108.076)
C6: (65.159,8.275,108.412)
C5: (64.843,7.921,107.162)
O3': (65.669,10.874,113.024)
N3: (65.149,10.178,106.541)
OP1: (67.345,4.869,113.319)
OP2: (66.705,4.556,110.845)
C2: (65.468,10.578,107.813)
C1': (65.799,9.935,110.148)
C3': (65.641,9.565,112.476)
O5': (66.794,6.822,111.905)
O4': (66.984,9.279,110.526)
C5': (67.592,7.899,112.418)
P: (67.380,5.344,111.914)
C4': (67.044,9.230,111.980)
C2': (64.794,9.491,111.203)
O2': (63.674,10.354,111.206)
N1: (65.466,9.567,108.763)
O4: (64.547,8.709,104.942)
O2: (65.730,11.743,108.076)
C6: (65.159,8.275,108.412)
C5: (64.843,7.921,107.162)
O3': (65.669,10.874,113.024)
Image (generated by PyMOL):