Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:0586:0547
Extra
PDB:
ATOM 1 O3' A A 585 -17.480 109.819 87.911 1.00 68.97 O
ATOM 2 P C A 586 -17.789 111.393 88.026 1.00 70.34 P
ATOM 3 OP1 C A 586 -18.720 111.716 86.915 1.00 70.87 O
ATOM 4 OP2 C A 586 -16.519 112.142 88.154 1.00 70.93 O
ATOM 5 O5' C A 586 -18.561 111.537 89.415 1.00 71.07 O
ATOM 6 C5' C A 586 -19.876 110.974 89.594 1.00 71.68 C
ATOM 7 C4' C A 586 -20.381 111.233 90.996 1.00 72.80 C
ATOM 8 O4' C A 586 -19.547 110.542 91.965 1.00 73.74 O
ATOM 9 C3' C A 586 -20.344 112.677 91.463 1.00 74.37 C
ATOM 10 O3' C A 586 -21.434 113.439 90.959 1.00 73.49 O
ATOM 11 C2' C A 586 -20.381 112.530 92.980 1.00 75.16 C
ATOM 12 O2' C A 586 -21.680 112.306 93.488 1.00 75.49 O
ATOM 13 C1' C A 586 -19.532 111.272 93.183 1.00 75.49 C
ATOM 14 N1 C A 586 -18.134 111.548 93.570 1.00 78.33 N
ATOM 15 C2 C A 586 -17.828 111.696 94.937 1.00 80.40 C
ATOM 16 O2 C A 586 -18.738 111.595 95.778 1.00 82.80 O
ATOM 17 N3 C A 586 -16.551 111.945 95.304 1.00 80.41 N
ATOM 18 C4 C A 586 -15.597 112.045 94.376 1.00 80.10 C
ATOM 19 N4 C A 586 -14.349 112.283 94.790 1.00 79.53 N
ATOM 20 C5 C A 586 -15.878 111.905 92.986 1.00 79.74 C
ATOM 21 C6 C A 586 -17.147 111.660 92.630 1.00 79.03 C
ATOM 22 P G A 587 -21.264 115.023 90.765 1.00 74.49 P
ATOM 23 OP1 G A 587 -22.560 115.580 90.308 1.00 76.95 O
ATOM 24 OP2 G A 587 -20.046 115.262 89.954 1.00 75.23 O
ATOM 25 O5' G A 587 -20.998 115.553 92.242 1.00 72.31 O
TER
ATOM 1 O3' C B 546 -8.850 115.923 103.312 1.00 72.21 O
ATOM 2 P U B 547 -9.253 114.372 103.529 1.00 72.36 P
ATOM 3 OP1 U B 547 -8.354 113.791 104.556 1.00 71.70 O
ATOM 4 OP2 U B 547 -9.353 113.724 102.197 1.00 71.08 O
ATOM 5 O5' U B 547 -10.729 114.439 104.132 1.00 73.33 O
ATOM 6 C5' U B 547 -11.742 115.194 103.451 1.00 74.37 C
ATOM 7 C4' U B 547 -13.115 114.895 103.990 1.00 74.70 C
ATOM 8 O4' U B 547 -14.060 115.649 103.178 1.00 76.52 O
ATOM 9 C3' U B 547 -13.565 113.442 103.892 1.00 74.67 C
ATOM 10 O3' U B 547 -13.288 112.717 105.086 1.00 72.15 O
ATOM 11 C2' U B 547 -15.051 113.566 103.581 1.00 75.80 C
ATOM 12 O2' U B 547 -15.838 113.855 104.720 1.00 75.03 O
ATOM 13 C1' U B 547 -15.044 114.779 102.649 1.00 77.52 C
ATOM 14 N1 U B 547 -14.683 114.454 101.256 1.00 78.56 N
ATOM 15 C2 U B 547 -15.713 114.248 100.351 1.00 80.96 C
ATOM 16 O2 U B 547 -16.896 114.355 100.648 1.00 83.56 O
ATOM 17 N3 U B 547 -15.309 113.902 99.083 1.00 81.90 N
ATOM 18 C4 U B 547 -14.013 113.747 98.635 1.00 82.06 C
ATOM 19 O4 U B 547 -13.808 113.406 97.466 1.00 82.17 O
ATOM 20 C5 U B 547 -13.010 114.006 99.617 1.00 81.03 C
ATOM 21 C6 U B 547 -13.369 114.344 100.858 1.00 79.56 C
ATOM 22 P C B 548 -13.110 111.118 105.033 1.00 71.73 P
ATOM 23 OP1 C B 548 -13.367 110.633 106.408 1.00 72.84 O
ATOM 24 OP2 C B 548 -11.819 110.794 104.381 1.00 72.68 O
ATOM 25 O5' C B 548 -14.297 110.608 104.095 1.00 70.25 O
TER
ATOM 2 P C A 586 -17.789 111.393 88.026 1.00 70.34 P
ATOM 3 OP1 C A 586 -18.720 111.716 86.915 1.00 70.87 O
ATOM 4 OP2 C A 586 -16.519 112.142 88.154 1.00 70.93 O
ATOM 5 O5' C A 586 -18.561 111.537 89.415 1.00 71.07 O
ATOM 6 C5' C A 586 -19.876 110.974 89.594 1.00 71.68 C
ATOM 7 C4' C A 586 -20.381 111.233 90.996 1.00 72.80 C
ATOM 8 O4' C A 586 -19.547 110.542 91.965 1.00 73.74 O
ATOM 9 C3' C A 586 -20.344 112.677 91.463 1.00 74.37 C
ATOM 10 O3' C A 586 -21.434 113.439 90.959 1.00 73.49 O
ATOM 11 C2' C A 586 -20.381 112.530 92.980 1.00 75.16 C
ATOM 12 O2' C A 586 -21.680 112.306 93.488 1.00 75.49 O
ATOM 13 C1' C A 586 -19.532 111.272 93.183 1.00 75.49 C
ATOM 14 N1 C A 586 -18.134 111.548 93.570 1.00 78.33 N
ATOM 15 C2 C A 586 -17.828 111.696 94.937 1.00 80.40 C
ATOM 16 O2 C A 586 -18.738 111.595 95.778 1.00 82.80 O
ATOM 17 N3 C A 586 -16.551 111.945 95.304 1.00 80.41 N
ATOM 18 C4 C A 586 -15.597 112.045 94.376 1.00 80.10 C
ATOM 19 N4 C A 586 -14.349 112.283 94.790 1.00 79.53 N
ATOM 20 C5 C A 586 -15.878 111.905 92.986 1.00 79.74 C
ATOM 21 C6 C A 586 -17.147 111.660 92.630 1.00 79.03 C
ATOM 22 P G A 587 -21.264 115.023 90.765 1.00 74.49 P
ATOM 23 OP1 G A 587 -22.560 115.580 90.308 1.00 76.95 O
ATOM 24 OP2 G A 587 -20.046 115.262 89.954 1.00 75.23 O
ATOM 25 O5' G A 587 -20.998 115.553 92.242 1.00 72.31 O
TER
ATOM 1 O3' C B 546 -8.850 115.923 103.312 1.00 72.21 O
ATOM 2 P U B 547 -9.253 114.372 103.529 1.00 72.36 P
ATOM 3 OP1 U B 547 -8.354 113.791 104.556 1.00 71.70 O
ATOM 4 OP2 U B 547 -9.353 113.724 102.197 1.00 71.08 O
ATOM 5 O5' U B 547 -10.729 114.439 104.132 1.00 73.33 O
ATOM 6 C5' U B 547 -11.742 115.194 103.451 1.00 74.37 C
ATOM 7 C4' U B 547 -13.115 114.895 103.990 1.00 74.70 C
ATOM 8 O4' U B 547 -14.060 115.649 103.178 1.00 76.52 O
ATOM 9 C3' U B 547 -13.565 113.442 103.892 1.00 74.67 C
ATOM 10 O3' U B 547 -13.288 112.717 105.086 1.00 72.15 O
ATOM 11 C2' U B 547 -15.051 113.566 103.581 1.00 75.80 C
ATOM 12 O2' U B 547 -15.838 113.855 104.720 1.00 75.03 O
ATOM 13 C1' U B 547 -15.044 114.779 102.649 1.00 77.52 C
ATOM 14 N1 U B 547 -14.683 114.454 101.256 1.00 78.56 N
ATOM 15 C2 U B 547 -15.713 114.248 100.351 1.00 80.96 C
ATOM 16 O2 U B 547 -16.896 114.355 100.648 1.00 83.56 O
ATOM 17 N3 U B 547 -15.309 113.902 99.083 1.00 81.90 N
ATOM 18 C4 U B 547 -14.013 113.747 98.635 1.00 82.06 C
ATOM 19 O4 U B 547 -13.808 113.406 97.466 1.00 82.17 O
ATOM 20 C5 U B 547 -13.010 114.006 99.617 1.00 81.03 C
ATOM 21 C6 U B 547 -13.369 114.344 100.858 1.00 79.56 C
ATOM 22 P C B 548 -13.110 111.118 105.033 1.00 71.73 P
ATOM 23 OP1 C B 548 -13.367 110.633 106.408 1.00 72.84 O
ATOM 24 OP2 C B 548 -11.819 110.794 104.381 1.00 72.68 O
ATOM 25 O5' C B 548 -14.297 110.608 104.095 1.00 70.25 O
TER
Atoms:
C2: (-17.828,111.696,94.937)
OP1: (-18.720,111.716,86.915)
OP2: (-16.519,112.142,88.154)
C4: (-15.597,112.045,94.376)
O5': (-18.561,111.537,89.415)
C3': (-20.344,112.677,91.463)
C1': (-19.532,111.272,93.183)
O4': (-19.547,110.542,91.965)
C5': (-19.876,110.974,89.594)
P: (-17.789,111.393,88.026)
O2: (-18.738,111.595,95.778)
C4': (-20.381,111.233,90.996)
C2': (-20.381,112.530,92.980)
O2': (-21.680,112.306,93.488)
N1: (-18.134,111.548,93.570)
N3: (-16.551,111.945,95.304)
N4: (-14.349,112.283,94.790)
C6: (-17.147,111.660,92.630)
C5: (-15.878,111.905,92.986)
O3': (-21.434,113.439,90.959)
OP1: (-18.720,111.716,86.915)
OP2: (-16.519,112.142,88.154)
C4: (-15.597,112.045,94.376)
O5': (-18.561,111.537,89.415)
C3': (-20.344,112.677,91.463)
C1': (-19.532,111.272,93.183)
O4': (-19.547,110.542,91.965)
C5': (-19.876,110.974,89.594)
P: (-17.789,111.393,88.026)
O2: (-18.738,111.595,95.778)
C4': (-20.381,111.233,90.996)
C2': (-20.381,112.530,92.980)
O2': (-21.680,112.306,93.488)
N1: (-18.134,111.548,93.570)
N3: (-16.551,111.945,95.304)
N4: (-14.349,112.283,94.790)
C6: (-17.147,111.660,92.630)
C5: (-15.878,111.905,92.986)
O3': (-21.434,113.439,90.959)
C4: (-14.013,113.747,98.635)
N3: (-15.309,113.902,99.083)
OP1: (-8.354,113.791,104.556)
OP2: (-9.353,113.724,102.197)
C2: (-15.713,114.248,100.351)
C1': (-15.044,114.779,102.649)
C3': (-13.565,113.442,103.892)
O5': (-10.729,114.439,104.132)
O4': (-14.060,115.649,103.178)
C5': (-11.742,115.194,103.451)
P: (-9.253,114.372,103.529)
C4': (-13.115,114.895,103.990)
C2': (-15.051,113.566,103.581)
O2': (-15.838,113.855,104.720)
N1: (-14.683,114.454,101.256)
O4: (-13.808,113.406,97.466)
O2: (-16.896,114.355,100.648)
C6: (-13.369,114.344,100.858)
C5: (-13.010,114.006,99.617)
O3': (-13.288,112.717,105.086)
N3: (-15.309,113.902,99.083)
OP1: (-8.354,113.791,104.556)
OP2: (-9.353,113.724,102.197)
C2: (-15.713,114.248,100.351)
C1': (-15.044,114.779,102.649)
C3': (-13.565,113.442,103.892)
O5': (-10.729,114.439,104.132)
O4': (-14.060,115.649,103.178)
C5': (-11.742,115.194,103.451)
P: (-9.253,114.372,103.529)
C4': (-13.115,114.895,103.990)
C2': (-15.051,113.566,103.581)
O2': (-15.838,113.855,104.720)
N1: (-14.683,114.454,101.256)
O4: (-13.808,113.406,97.466)
O2: (-16.896,114.355,100.648)
C6: (-13.369,114.344,100.858)
C5: (-13.010,114.006,99.617)
O3': (-13.288,112.717,105.086)
Image (generated by PyMOL):