Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0586:0547
Extra
PDB:
ATOM 1 O3' A A 585 -17.376 110.225 87.661 1.00 61.31 O
ATOM 2 P C A 586 -17.683 111.794 87.819 1.00 64.13 P
ATOM 3 OP1 C A 586 -18.595 112.169 86.709 1.00 63.53 O
ATOM 4 OP2 C A 586 -16.397 112.515 87.981 1.00 64.24 O
ATOM 5 O5' C A 586 -18.473 111.892 89.203 1.00 66.21 O
ATOM 6 C5' C A 586 -19.778 111.288 89.358 1.00 68.29 C
ATOM 7 C4' C A 586 -20.339 111.562 90.739 1.00 69.68 C
ATOM 8 O4' C A 586 -19.570 110.857 91.750 1.00 70.40 O
ATOM 9 C3' C A 586 -20.314 113.008 91.203 1.00 71.33 C
ATOM 10 O3' C A 586 -21.384 113.767 90.656 1.00 71.22 O
ATOM 11 C2' C A 586 -20.412 112.865 92.718 1.00 72.16 C
ATOM 12 O2' C A 586 -21.729 112.641 93.179 1.00 72.98 O
ATOM 13 C1' C A 586 -19.568 111.609 92.955 1.00 72.28 C
ATOM 14 N1 C A 586 -18.173 111.916 93.327 1.00 74.53 N
ATOM 15 C2 C A 586 -17.847 112.043 94.688 1.00 76.72 C
ATOM 16 O2 C A 586 -18.735 111.883 95.545 1.00 78.98 O
ATOM 17 N3 C A 586 -16.574 112.335 95.036 1.00 77.14 N
ATOM 18 C4 C A 586 -15.644 112.495 94.093 1.00 76.76 C
ATOM 19 N4 C A 586 -14.401 112.780 94.486 1.00 77.26 N
ATOM 20 C5 C A 586 -15.946 112.369 92.706 1.00 75.97 C
ATOM 21 C6 C A 586 -17.209 112.082 92.371 1.00 75.17 C
ATOM 22 P G A 587 -21.165 115.324 90.328 1.00 72.98 P
ATOM 23 OP1 G A 587 -22.429 115.845 89.751 1.00 73.44 O
ATOM 24 OP2 G A 587 -19.905 115.460 89.559 1.00 72.59 O
ATOM 25 O5' G A 587 -20.967 115.988 91.763 1.00 71.59 O
TER
ATOM 1 O3' C B 546 -8.850 116.509 103.074 1.00 73.63 O
ATOM 2 P U B 547 -9.249 114.962 103.311 1.00 75.50 P
ATOM 3 OP1 U B 547 -8.396 114.438 104.406 1.00 74.87 O
ATOM 4 OP2 U B 547 -9.273 114.257 102.002 1.00 74.17 O
ATOM 5 O5' U B 547 -10.754 115.024 103.835 1.00 75.81 O
ATOM 6 C5' U B 547 -11.750 115.723 103.077 1.00 75.38 C
ATOM 7 C4' U B 547 -13.137 115.455 103.605 1.00 75.11 C
ATOM 8 O4' U B 547 -14.066 116.193 102.763 1.00 76.15 O
ATOM 9 C3' U B 547 -13.594 114.001 103.547 1.00 74.19 C
ATOM 10 O3' U B 547 -13.356 113.312 104.770 1.00 71.21 O
ATOM 11 C2' U B 547 -15.070 114.120 103.194 1.00 75.49 C
ATOM 12 O2' U B 547 -15.879 114.431 104.310 1.00 75.00 O
ATOM 13 C1' U B 547 -15.039 115.312 102.237 1.00 76.98 C
ATOM 14 N1 U B 547 -14.651 114.963 100.858 1.00 78.03 N
ATOM 15 C2 U B 547 -15.656 114.833 99.918 1.00 80.32 C
ATOM 16 O2 U B 547 -16.837 115.013 100.176 1.00 83.00 O
ATOM 17 N3 U B 547 -15.230 114.483 98.660 1.00 81.19 N
ATOM 18 C4 U B 547 -13.929 114.260 98.253 1.00 80.89 C
ATOM 19 O4 U B 547 -13.707 113.896 97.094 1.00 80.48 O
ATOM 20 C5 U B 547 -12.950 114.429 99.276 1.00 79.82 C
ATOM 21 C6 U B 547 -13.332 114.764 100.508 1.00 78.67 C
ATOM 22 P U B 548 -13.033 111.736 104.751 1.00 70.11 P
ATOM 23 OP1 U B 548 -13.148 111.251 106.147 1.00 69.52 O
ATOM 24 OP2 U B 548 -11.760 111.529 104.010 1.00 71.04 O
ATOM 25 O5' U B 548 -14.224 111.098 103.903 1.00 68.22 O
TER
ATOM 2 P C A 586 -17.683 111.794 87.819 1.00 64.13 P
ATOM 3 OP1 C A 586 -18.595 112.169 86.709 1.00 63.53 O
ATOM 4 OP2 C A 586 -16.397 112.515 87.981 1.00 64.24 O
ATOM 5 O5' C A 586 -18.473 111.892 89.203 1.00 66.21 O
ATOM 6 C5' C A 586 -19.778 111.288 89.358 1.00 68.29 C
ATOM 7 C4' C A 586 -20.339 111.562 90.739 1.00 69.68 C
ATOM 8 O4' C A 586 -19.570 110.857 91.750 1.00 70.40 O
ATOM 9 C3' C A 586 -20.314 113.008 91.203 1.00 71.33 C
ATOM 10 O3' C A 586 -21.384 113.767 90.656 1.00 71.22 O
ATOM 11 C2' C A 586 -20.412 112.865 92.718 1.00 72.16 C
ATOM 12 O2' C A 586 -21.729 112.641 93.179 1.00 72.98 O
ATOM 13 C1' C A 586 -19.568 111.609 92.955 1.00 72.28 C
ATOM 14 N1 C A 586 -18.173 111.916 93.327 1.00 74.53 N
ATOM 15 C2 C A 586 -17.847 112.043 94.688 1.00 76.72 C
ATOM 16 O2 C A 586 -18.735 111.883 95.545 1.00 78.98 O
ATOM 17 N3 C A 586 -16.574 112.335 95.036 1.00 77.14 N
ATOM 18 C4 C A 586 -15.644 112.495 94.093 1.00 76.76 C
ATOM 19 N4 C A 586 -14.401 112.780 94.486 1.00 77.26 N
ATOM 20 C5 C A 586 -15.946 112.369 92.706 1.00 75.97 C
ATOM 21 C6 C A 586 -17.209 112.082 92.371 1.00 75.17 C
ATOM 22 P G A 587 -21.165 115.324 90.328 1.00 72.98 P
ATOM 23 OP1 G A 587 -22.429 115.845 89.751 1.00 73.44 O
ATOM 24 OP2 G A 587 -19.905 115.460 89.559 1.00 72.59 O
ATOM 25 O5' G A 587 -20.967 115.988 91.763 1.00 71.59 O
TER
ATOM 1 O3' C B 546 -8.850 116.509 103.074 1.00 73.63 O
ATOM 2 P U B 547 -9.249 114.962 103.311 1.00 75.50 P
ATOM 3 OP1 U B 547 -8.396 114.438 104.406 1.00 74.87 O
ATOM 4 OP2 U B 547 -9.273 114.257 102.002 1.00 74.17 O
ATOM 5 O5' U B 547 -10.754 115.024 103.835 1.00 75.81 O
ATOM 6 C5' U B 547 -11.750 115.723 103.077 1.00 75.38 C
ATOM 7 C4' U B 547 -13.137 115.455 103.605 1.00 75.11 C
ATOM 8 O4' U B 547 -14.066 116.193 102.763 1.00 76.15 O
ATOM 9 C3' U B 547 -13.594 114.001 103.547 1.00 74.19 C
ATOM 10 O3' U B 547 -13.356 113.312 104.770 1.00 71.21 O
ATOM 11 C2' U B 547 -15.070 114.120 103.194 1.00 75.49 C
ATOM 12 O2' U B 547 -15.879 114.431 104.310 1.00 75.00 O
ATOM 13 C1' U B 547 -15.039 115.312 102.237 1.00 76.98 C
ATOM 14 N1 U B 547 -14.651 114.963 100.858 1.00 78.03 N
ATOM 15 C2 U B 547 -15.656 114.833 99.918 1.00 80.32 C
ATOM 16 O2 U B 547 -16.837 115.013 100.176 1.00 83.00 O
ATOM 17 N3 U B 547 -15.230 114.483 98.660 1.00 81.19 N
ATOM 18 C4 U B 547 -13.929 114.260 98.253 1.00 80.89 C
ATOM 19 O4 U B 547 -13.707 113.896 97.094 1.00 80.48 O
ATOM 20 C5 U B 547 -12.950 114.429 99.276 1.00 79.82 C
ATOM 21 C6 U B 547 -13.332 114.764 100.508 1.00 78.67 C
ATOM 22 P U B 548 -13.033 111.736 104.751 1.00 70.11 P
ATOM 23 OP1 U B 548 -13.148 111.251 106.147 1.00 69.52 O
ATOM 24 OP2 U B 548 -11.760 111.529 104.010 1.00 71.04 O
ATOM 25 O5' U B 548 -14.224 111.098 103.903 1.00 68.22 O
TER
Atoms:
C2: (-17.847,112.043,94.688)
OP1: (-18.595,112.169,86.709)
OP2: (-16.397,112.515,87.981)
C4: (-15.644,112.495,94.093)
O5': (-18.473,111.892,89.203)
C3': (-20.314,113.008,91.203)
C1': (-19.568,111.609,92.955)
O4': (-19.570,110.857,91.750)
C5': (-19.778,111.288,89.358)
P: (-17.683,111.794,87.819)
O2: (-18.735,111.883,95.545)
C4': (-20.339,111.562,90.739)
C2': (-20.412,112.865,92.718)
O2': (-21.729,112.641,93.179)
N1: (-18.173,111.916,93.327)
N3: (-16.574,112.335,95.036)
N4: (-14.401,112.780,94.486)
C6: (-17.209,112.082,92.371)
C5: (-15.946,112.369,92.706)
O3': (-21.384,113.767,90.656)
OP1: (-18.595,112.169,86.709)
OP2: (-16.397,112.515,87.981)
C4: (-15.644,112.495,94.093)
O5': (-18.473,111.892,89.203)
C3': (-20.314,113.008,91.203)
C1': (-19.568,111.609,92.955)
O4': (-19.570,110.857,91.750)
C5': (-19.778,111.288,89.358)
P: (-17.683,111.794,87.819)
O2: (-18.735,111.883,95.545)
C4': (-20.339,111.562,90.739)
C2': (-20.412,112.865,92.718)
O2': (-21.729,112.641,93.179)
N1: (-18.173,111.916,93.327)
N3: (-16.574,112.335,95.036)
N4: (-14.401,112.780,94.486)
C6: (-17.209,112.082,92.371)
C5: (-15.946,112.369,92.706)
O3': (-21.384,113.767,90.656)
C4: (-13.929,114.260,98.253)
N3: (-15.230,114.483,98.660)
OP1: (-8.396,114.438,104.406)
OP2: (-9.273,114.257,102.002)
C2: (-15.656,114.833,99.918)
C1': (-15.039,115.312,102.237)
C3': (-13.594,114.001,103.547)
O5': (-10.754,115.024,103.835)
O4': (-14.066,116.193,102.763)
C5': (-11.750,115.723,103.077)
P: (-9.249,114.962,103.311)
C4': (-13.137,115.455,103.605)
C2': (-15.070,114.120,103.194)
O2': (-15.879,114.431,104.310)
N1: (-14.651,114.963,100.858)
O4: (-13.707,113.896,97.094)
O2: (-16.837,115.013,100.176)
C6: (-13.332,114.764,100.508)
C5: (-12.950,114.429,99.276)
O3': (-13.356,113.312,104.770)
N3: (-15.230,114.483,98.660)
OP1: (-8.396,114.438,104.406)
OP2: (-9.273,114.257,102.002)
C2: (-15.656,114.833,99.918)
C1': (-15.039,115.312,102.237)
C3': (-13.594,114.001,103.547)
O5': (-10.754,115.024,103.835)
O4': (-14.066,116.193,102.763)
C5': (-11.750,115.723,103.077)
P: (-9.249,114.962,103.311)
C4': (-13.137,115.455,103.605)
C2': (-15.070,114.120,103.194)
O2': (-15.879,114.431,104.310)
N1: (-14.651,114.963,100.858)
O4: (-13.707,113.896,97.094)
O2: (-16.837,115.013,100.176)
C6: (-13.332,114.764,100.508)
C5: (-12.950,114.429,99.276)
O3': (-13.356,113.312,104.770)
Image (generated by PyMOL):