Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0751:0887
Extra
PDB:
ATOM 1 O3' C A 750 50.919 117.254 65.502 1.00 22.24 O
ATOM 2 P C A 751 52.511 117.276 65.680 1.00 25.91 P
ATOM 3 OP1 C A 751 53.079 118.083 64.572 1.00 26.74 O
ATOM 4 OP2 C A 751 53.026 115.908 65.918 1.00 24.12 O
ATOM 5 O5' C A 751 52.708 118.095 67.030 1.00 26.89 O
ATOM 6 C5' C A 751 52.219 119.436 67.134 1.00 25.45 C
ATOM 7 C4' C A 751 52.331 119.932 68.550 1.00 25.51 C
ATOM 8 O4' C A 751 51.511 119.116 69.423 1.00 25.57 O
ATOM 9 C3' C A 751 53.694 119.859 69.216 1.00 25.27 C
ATOM 10 O3' C A 751 54.586 120.885 68.791 1.00 25.10 O
ATOM 11 C2' C A 751 53.295 120.029 70.670 1.00 24.92 C
ATOM 12 O2' C A 751 52.914 121.356 70.958 1.00 23.01 O
ATOM 13 C1' C A 751 52.056 119.138 70.731 1.00 24.32 C
ATOM 14 N1 C A 751 52.432 117.769 71.130 1.00 25.22 N
ATOM 15 C2 C A 751 52.696 117.525 72.484 1.00 25.47 C
ATOM 16 O2 C A 751 52.538 118.442 73.298 1.00 28.03 O
ATOM 17 N3 C A 751 53.116 116.301 72.870 1.00 26.73 N
ATOM 18 C4 C A 751 53.268 115.332 71.964 1.00 26.94 C
ATOM 19 N4 C A 751 53.732 114.151 72.389 1.00 24.94 N
ATOM 20 C5 C A 751 52.965 115.537 70.583 1.00 24.25 C
ATOM 21 C6 C A 751 52.554 116.761 70.214 1.00 24.12 C
ATOM 22 P G A 752 56.158 120.571 68.662 1.00 25.07 P
ATOM 23 OP1 G A 752 56.788 121.793 68.110 1.00 27.30 O
ATOM 24 OP2 G A 752 56.355 119.280 67.974 1.00 26.09 O
ATOM 25 O5' G A 752 56.656 120.380 70.157 1.00 25.72 O
TER
ATOM 1 O3' C B 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 2 P U B 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 3 OP1 U B 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 4 OP2 U B 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 5 O5' U B 887 55.686 110.111 81.375 1.00 26.18 O
ATOM 6 C5' U B 887 55.924 111.007 82.462 1.00 26.34 C
ATOM 7 C4' U B 887 55.576 112.429 82.100 1.00 25.70 C
ATOM 8 O4' U B 887 56.366 112.893 80.975 1.00 27.06 O
ATOM 9 C3' U B 887 54.164 112.754 81.660 1.00 24.12 C
ATOM 10 O3' U B 887 53.239 112.762 82.743 1.00 26.48 O
ATOM 11 C2' U B 887 54.370 114.158 81.109 1.00 23.67 C
ATOM 12 O2' U B 887 54.555 115.114 82.126 1.00 21.26 O
ATOM 13 C1' U B 887 55.703 114.000 80.380 1.00 24.10 C
ATOM 14 N1 U B 887 55.483 113.756 78.941 1.00 26.81 N
ATOM 15 C2 U B 887 55.110 114.853 78.177 1.00 26.18 C
ATOM 16 O2 U B 887 55.009 115.977 78.638 1.00 28.83 O
ATOM 17 N3 U B 887 54.854 114.591 76.861 1.00 26.19 N
ATOM 18 C4 U B 887 54.933 113.382 76.225 1.00 28.07 C
ATOM 19 O4 U B 887 54.548 113.302 75.056 1.00 28.15 O
ATOM 20 C5 U B 887 55.359 112.289 77.062 1.00 28.26 C
ATOM 21 C6 U B 887 55.611 112.508 78.361 1.00 25.60 C
ATOM 22 P G B 888 51.675 112.507 82.457 1.00 26.69 P
ATOM 23 OP1 G B 888 50.942 112.688 83.741 1.00 26.83 O
ATOM 24 OP2 G B 888 51.560 111.233 81.724 1.00 25.04 O
ATOM 25 O5' G B 888 51.261 113.696 81.482 1.00 23.55 O
TER
ATOM 2 P C A 751 52.511 117.276 65.680 1.00 25.91 P
ATOM 3 OP1 C A 751 53.079 118.083 64.572 1.00 26.74 O
ATOM 4 OP2 C A 751 53.026 115.908 65.918 1.00 24.12 O
ATOM 5 O5' C A 751 52.708 118.095 67.030 1.00 26.89 O
ATOM 6 C5' C A 751 52.219 119.436 67.134 1.00 25.45 C
ATOM 7 C4' C A 751 52.331 119.932 68.550 1.00 25.51 C
ATOM 8 O4' C A 751 51.511 119.116 69.423 1.00 25.57 O
ATOM 9 C3' C A 751 53.694 119.859 69.216 1.00 25.27 C
ATOM 10 O3' C A 751 54.586 120.885 68.791 1.00 25.10 O
ATOM 11 C2' C A 751 53.295 120.029 70.670 1.00 24.92 C
ATOM 12 O2' C A 751 52.914 121.356 70.958 1.00 23.01 O
ATOM 13 C1' C A 751 52.056 119.138 70.731 1.00 24.32 C
ATOM 14 N1 C A 751 52.432 117.769 71.130 1.00 25.22 N
ATOM 15 C2 C A 751 52.696 117.525 72.484 1.00 25.47 C
ATOM 16 O2 C A 751 52.538 118.442 73.298 1.00 28.03 O
ATOM 17 N3 C A 751 53.116 116.301 72.870 1.00 26.73 N
ATOM 18 C4 C A 751 53.268 115.332 71.964 1.00 26.94 C
ATOM 19 N4 C A 751 53.732 114.151 72.389 1.00 24.94 N
ATOM 20 C5 C A 751 52.965 115.537 70.583 1.00 24.25 C
ATOM 21 C6 C A 751 52.554 116.761 70.214 1.00 24.12 C
ATOM 22 P G A 752 56.158 120.571 68.662 1.00 25.07 P
ATOM 23 OP1 G A 752 56.788 121.793 68.110 1.00 27.30 O
ATOM 24 OP2 G A 752 56.355 119.280 67.974 1.00 26.09 O
ATOM 25 O5' G A 752 56.656 120.380 70.157 1.00 25.72 O
TER
ATOM 1 O3' C B 886 57.841 108.803 81.246 1.00 26.81 O
ATOM 2 P U B 887 56.259 108.627 81.446 1.00 26.50 P
ATOM 3 OP1 U B 887 56.079 108.158 82.841 1.00 26.83 O
ATOM 4 OP2 U B 887 55.719 107.823 80.323 1.00 27.15 O
ATOM 5 O5' U B 887 55.686 110.111 81.375 1.00 26.18 O
ATOM 6 C5' U B 887 55.924 111.007 82.462 1.00 26.34 C
ATOM 7 C4' U B 887 55.576 112.429 82.100 1.00 25.70 C
ATOM 8 O4' U B 887 56.366 112.893 80.975 1.00 27.06 O
ATOM 9 C3' U B 887 54.164 112.754 81.660 1.00 24.12 C
ATOM 10 O3' U B 887 53.239 112.762 82.743 1.00 26.48 O
ATOM 11 C2' U B 887 54.370 114.158 81.109 1.00 23.67 C
ATOM 12 O2' U B 887 54.555 115.114 82.126 1.00 21.26 O
ATOM 13 C1' U B 887 55.703 114.000 80.380 1.00 24.10 C
ATOM 14 N1 U B 887 55.483 113.756 78.941 1.00 26.81 N
ATOM 15 C2 U B 887 55.110 114.853 78.177 1.00 26.18 C
ATOM 16 O2 U B 887 55.009 115.977 78.638 1.00 28.83 O
ATOM 17 N3 U B 887 54.854 114.591 76.861 1.00 26.19 N
ATOM 18 C4 U B 887 54.933 113.382 76.225 1.00 28.07 C
ATOM 19 O4 U B 887 54.548 113.302 75.056 1.00 28.15 O
ATOM 20 C5 U B 887 55.359 112.289 77.062 1.00 28.26 C
ATOM 21 C6 U B 887 55.611 112.508 78.361 1.00 25.60 C
ATOM 22 P G B 888 51.675 112.507 82.457 1.00 26.69 P
ATOM 23 OP1 G B 888 50.942 112.688 83.741 1.00 26.83 O
ATOM 24 OP2 G B 888 51.560 111.233 81.724 1.00 25.04 O
ATOM 25 O5' G B 888 51.261 113.696 81.482 1.00 23.55 O
TER
Atoms:
C2: (52.696,117.525,72.484)
OP1: (53.079,118.083,64.572)
OP2: (53.026,115.908,65.918)
C4: (53.268,115.332,71.964)
O5': (52.708,118.095,67.030)
C3': (53.694,119.859,69.216)
C1': (52.056,119.138,70.731)
O4': (51.511,119.116,69.423)
C5': (52.219,119.436,67.134)
P: (52.511,117.276,65.680)
O2: (52.538,118.442,73.298)
C4': (52.331,119.932,68.550)
C2': (53.295,120.029,70.670)
O2': (52.914,121.356,70.958)
N1: (52.432,117.769,71.130)
N3: (53.116,116.301,72.870)
N4: (53.732,114.151,72.389)
C6: (52.554,116.761,70.214)
C5: (52.965,115.537,70.583)
O3': (54.586,120.885,68.791)
OP1: (53.079,118.083,64.572)
OP2: (53.026,115.908,65.918)
C4: (53.268,115.332,71.964)
O5': (52.708,118.095,67.030)
C3': (53.694,119.859,69.216)
C1': (52.056,119.138,70.731)
O4': (51.511,119.116,69.423)
C5': (52.219,119.436,67.134)
P: (52.511,117.276,65.680)
O2: (52.538,118.442,73.298)
C4': (52.331,119.932,68.550)
C2': (53.295,120.029,70.670)
O2': (52.914,121.356,70.958)
N1: (52.432,117.769,71.130)
N3: (53.116,116.301,72.870)
N4: (53.732,114.151,72.389)
C6: (52.554,116.761,70.214)
C5: (52.965,115.537,70.583)
O3': (54.586,120.885,68.791)
C4: (54.933,113.382,76.225)
N3: (54.854,114.591,76.861)
OP1: (56.079,108.158,82.841)
OP2: (55.719,107.823,80.323)
C2: (55.110,114.853,78.177)
C1': (55.703,114.000,80.380)
C3': (54.164,112.754,81.660)
O5': (55.686,110.111,81.375)
O4': (56.366,112.893,80.975)
C5': (55.924,111.007,82.462)
P: (56.259,108.627,81.446)
C4': (55.576,112.429,82.100)
C2': (54.370,114.158,81.109)
O2': (54.555,115.114,82.126)
N1: (55.483,113.756,78.941)
O4: (54.548,113.302,75.056)
O2: (55.009,115.977,78.638)
C6: (55.611,112.508,78.361)
C5: (55.359,112.289,77.062)
O3': (53.239,112.762,82.743)
N3: (54.854,114.591,76.861)
OP1: (56.079,108.158,82.841)
OP2: (55.719,107.823,80.323)
C2: (55.110,114.853,78.177)
C1': (55.703,114.000,80.380)
C3': (54.164,112.754,81.660)
O5': (55.686,110.111,81.375)
O4': (56.366,112.893,80.975)
C5': (55.924,111.007,82.462)
P: (56.259,108.627,81.446)
C4': (55.576,112.429,82.100)
C2': (54.370,114.158,81.109)
O2': (54.555,115.114,82.126)
N1: (55.483,113.756,78.941)
O4: (54.548,113.302,75.056)
O2: (55.009,115.977,78.638)
C6: (55.611,112.508,78.361)
C5: (55.359,112.289,77.062)
O3': (53.239,112.762,82.743)
Image (generated by PyMOL):