Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0751:0887
Extra
PDB:
ATOM 1 O3' C A 750 51.167 117.522 65.915 1.00 33.62 O
ATOM 2 P C A 751 52.760 117.461 66.045 1.00 37.83 P
ATOM 3 OP1 C A 751 53.313 118.206 64.894 1.00 37.99 O
ATOM 4 OP2 C A 751 53.169 116.048 66.275 1.00 35.96 O
ATOM 5 O5' C A 751 53.047 118.284 67.380 1.00 37.87 O
ATOM 6 C5' C A 751 52.573 119.637 67.506 1.00 37.84 C
ATOM 7 C4' C A 751 52.695 120.126 68.929 1.00 35.47 C
ATOM 8 O4' C A 751 51.881 119.314 69.804 1.00 34.94 O
ATOM 9 C3' C A 751 54.060 120.048 69.575 1.00 34.84 C
ATOM 10 O3' C A 751 54.930 121.078 69.142 1.00 33.27 O
ATOM 11 C2' C A 751 53.691 120.185 71.043 1.00 36.06 C
ATOM 12 O2' C A 751 53.331 121.495 71.420 1.00 36.22 O
ATOM 13 C1' C A 751 52.446 119.309 71.105 1.00 35.60 C
ATOM 14 N1 C A 751 52.814 117.932 71.474 1.00 36.30 N
ATOM 15 C2 C A 751 53.187 117.680 72.795 1.00 37.59 C
ATOM 16 O2 C A 751 53.161 118.616 73.615 1.00 40.79 O
ATOM 17 N3 C A 751 53.570 116.434 73.148 1.00 37.20 N
ATOM 18 C4 C A 751 53.595 115.461 72.239 1.00 36.91 C
ATOM 19 N4 C A 751 54.025 114.257 72.625 1.00 37.59 N
ATOM 20 C5 C A 751 53.194 115.679 70.894 1.00 36.16 C
ATOM 21 C6 C A 751 52.814 116.920 70.556 1.00 36.58 C
ATOM 22 P G A 752 56.502 120.790 69.043 1.00 32.83 P
ATOM 23 OP1 G A 752 57.142 122.026 68.540 1.00 34.66 O
ATOM 24 OP2 G A 752 56.711 119.522 68.327 1.00 34.37 O
ATOM 25 O5' G A 752 56.953 120.559 70.549 1.00 33.93 O
TER
ATOM 1 O3' C B 886 58.152 109.050 81.574 1.00 33.77 O
ATOM 2 P U B 887 56.569 108.863 81.748 1.00 32.96 P
ATOM 3 OP1 U B 887 56.314 108.364 83.122 1.00 28.68 O
ATOM 4 OP2 U B 887 56.067 108.096 80.584 1.00 33.59 O
ATOM 5 O5' U B 887 56.005 110.343 81.670 1.00 31.27 O
ATOM 6 C5' U B 887 56.163 111.214 82.784 1.00 34.55 C
ATOM 7 C4' U B 887 55.852 112.635 82.404 1.00 34.69 C
ATOM 8 O4' U B 887 56.610 113.018 81.230 1.00 36.06 O
ATOM 9 C3' U B 887 54.447 112.941 81.950 1.00 34.52 C
ATOM 10 O3' U B 887 53.539 113.001 83.034 1.00 35.39 O
ATOM 11 C2' U B 887 54.651 114.322 81.362 1.00 36.43 C
ATOM 12 O2' U B 887 54.860 115.253 82.403 1.00 39.65 O
ATOM 13 C1' U B 887 55.976 114.131 80.626 1.00 37.01 C
ATOM 14 N1 U B 887 55.791 113.890 79.183 1.00 38.24 N
ATOM 15 C2 U B 887 55.463 114.988 78.407 1.00 38.62 C
ATOM 16 O2 U B 887 55.353 116.112 78.867 1.00 41.76 O
ATOM 17 N3 U B 887 55.264 114.727 77.078 1.00 37.60 N
ATOM 18 C4 U B 887 55.359 113.513 76.447 1.00 38.92 C
ATOM 19 O4 U B 887 55.103 113.442 75.239 1.00 39.40 O
ATOM 20 C5 U B 887 55.721 112.420 77.305 1.00 37.41 C
ATOM 21 C6 U B 887 55.919 112.640 78.611 1.00 37.31 C
ATOM 22 P G B 888 51.990 112.661 82.780 1.00 33.24 P
ATOM 23 OP1 G B 888 51.267 112.739 84.070 1.00 32.34 O
ATOM 24 OP2 G B 888 51.938 111.423 81.979 1.00 34.16 O
ATOM 25 O5' G B 888 51.498 113.845 81.850 1.00 31.09 O
TER
ATOM 2 P C A 751 52.760 117.461 66.045 1.00 37.83 P
ATOM 3 OP1 C A 751 53.313 118.206 64.894 1.00 37.99 O
ATOM 4 OP2 C A 751 53.169 116.048 66.275 1.00 35.96 O
ATOM 5 O5' C A 751 53.047 118.284 67.380 1.00 37.87 O
ATOM 6 C5' C A 751 52.573 119.637 67.506 1.00 37.84 C
ATOM 7 C4' C A 751 52.695 120.126 68.929 1.00 35.47 C
ATOM 8 O4' C A 751 51.881 119.314 69.804 1.00 34.94 O
ATOM 9 C3' C A 751 54.060 120.048 69.575 1.00 34.84 C
ATOM 10 O3' C A 751 54.930 121.078 69.142 1.00 33.27 O
ATOM 11 C2' C A 751 53.691 120.185 71.043 1.00 36.06 C
ATOM 12 O2' C A 751 53.331 121.495 71.420 1.00 36.22 O
ATOM 13 C1' C A 751 52.446 119.309 71.105 1.00 35.60 C
ATOM 14 N1 C A 751 52.814 117.932 71.474 1.00 36.30 N
ATOM 15 C2 C A 751 53.187 117.680 72.795 1.00 37.59 C
ATOM 16 O2 C A 751 53.161 118.616 73.615 1.00 40.79 O
ATOM 17 N3 C A 751 53.570 116.434 73.148 1.00 37.20 N
ATOM 18 C4 C A 751 53.595 115.461 72.239 1.00 36.91 C
ATOM 19 N4 C A 751 54.025 114.257 72.625 1.00 37.59 N
ATOM 20 C5 C A 751 53.194 115.679 70.894 1.00 36.16 C
ATOM 21 C6 C A 751 52.814 116.920 70.556 1.00 36.58 C
ATOM 22 P G A 752 56.502 120.790 69.043 1.00 32.83 P
ATOM 23 OP1 G A 752 57.142 122.026 68.540 1.00 34.66 O
ATOM 24 OP2 G A 752 56.711 119.522 68.327 1.00 34.37 O
ATOM 25 O5' G A 752 56.953 120.559 70.549 1.00 33.93 O
TER
ATOM 1 O3' C B 886 58.152 109.050 81.574 1.00 33.77 O
ATOM 2 P U B 887 56.569 108.863 81.748 1.00 32.96 P
ATOM 3 OP1 U B 887 56.314 108.364 83.122 1.00 28.68 O
ATOM 4 OP2 U B 887 56.067 108.096 80.584 1.00 33.59 O
ATOM 5 O5' U B 887 56.005 110.343 81.670 1.00 31.27 O
ATOM 6 C5' U B 887 56.163 111.214 82.784 1.00 34.55 C
ATOM 7 C4' U B 887 55.852 112.635 82.404 1.00 34.69 C
ATOM 8 O4' U B 887 56.610 113.018 81.230 1.00 36.06 O
ATOM 9 C3' U B 887 54.447 112.941 81.950 1.00 34.52 C
ATOM 10 O3' U B 887 53.539 113.001 83.034 1.00 35.39 O
ATOM 11 C2' U B 887 54.651 114.322 81.362 1.00 36.43 C
ATOM 12 O2' U B 887 54.860 115.253 82.403 1.00 39.65 O
ATOM 13 C1' U B 887 55.976 114.131 80.626 1.00 37.01 C
ATOM 14 N1 U B 887 55.791 113.890 79.183 1.00 38.24 N
ATOM 15 C2 U B 887 55.463 114.988 78.407 1.00 38.62 C
ATOM 16 O2 U B 887 55.353 116.112 78.867 1.00 41.76 O
ATOM 17 N3 U B 887 55.264 114.727 77.078 1.00 37.60 N
ATOM 18 C4 U B 887 55.359 113.513 76.447 1.00 38.92 C
ATOM 19 O4 U B 887 55.103 113.442 75.239 1.00 39.40 O
ATOM 20 C5 U B 887 55.721 112.420 77.305 1.00 37.41 C
ATOM 21 C6 U B 887 55.919 112.640 78.611 1.00 37.31 C
ATOM 22 P G B 888 51.990 112.661 82.780 1.00 33.24 P
ATOM 23 OP1 G B 888 51.267 112.739 84.070 1.00 32.34 O
ATOM 24 OP2 G B 888 51.938 111.423 81.979 1.00 34.16 O
ATOM 25 O5' G B 888 51.498 113.845 81.850 1.00 31.09 O
TER
Atoms:
C2: (53.187,117.680,72.795)
OP1: (53.313,118.206,64.894)
OP2: (53.169,116.048,66.275)
C4: (53.595,115.461,72.239)
O5': (53.047,118.284,67.380)
C3': (54.060,120.048,69.575)
C1': (52.446,119.309,71.105)
O4': (51.881,119.314,69.804)
C5': (52.573,119.637,67.506)
P: (52.760,117.461,66.045)
O2: (53.161,118.616,73.615)
C4': (52.695,120.126,68.929)
C2': (53.691,120.185,71.043)
O2': (53.331,121.495,71.420)
N1: (52.814,117.932,71.474)
N3: (53.570,116.434,73.148)
N4: (54.025,114.257,72.625)
C6: (52.814,116.920,70.556)
C5: (53.194,115.679,70.894)
O3': (54.930,121.078,69.142)
OP1: (53.313,118.206,64.894)
OP2: (53.169,116.048,66.275)
C4: (53.595,115.461,72.239)
O5': (53.047,118.284,67.380)
C3': (54.060,120.048,69.575)
C1': (52.446,119.309,71.105)
O4': (51.881,119.314,69.804)
C5': (52.573,119.637,67.506)
P: (52.760,117.461,66.045)
O2: (53.161,118.616,73.615)
C4': (52.695,120.126,68.929)
C2': (53.691,120.185,71.043)
O2': (53.331,121.495,71.420)
N1: (52.814,117.932,71.474)
N3: (53.570,116.434,73.148)
N4: (54.025,114.257,72.625)
C6: (52.814,116.920,70.556)
C5: (53.194,115.679,70.894)
O3': (54.930,121.078,69.142)
C4: (55.359,113.513,76.447)
N3: (55.264,114.727,77.078)
OP1: (56.314,108.364,83.122)
OP2: (56.067,108.096,80.584)
C2: (55.463,114.988,78.407)
C1': (55.976,114.131,80.626)
C3': (54.447,112.941,81.950)
O5': (56.005,110.343,81.670)
O4': (56.610,113.018,81.230)
C5': (56.163,111.214,82.784)
P: (56.569,108.863,81.748)
C4': (55.852,112.635,82.404)
C2': (54.651,114.322,81.362)
O2': (54.860,115.253,82.403)
N1: (55.791,113.890,79.183)
O4: (55.103,113.442,75.239)
O2: (55.353,116.112,78.867)
C6: (55.919,112.640,78.611)
C5: (55.721,112.420,77.305)
O3': (53.539,113.001,83.034)
N3: (55.264,114.727,77.078)
OP1: (56.314,108.364,83.122)
OP2: (56.067,108.096,80.584)
C2: (55.463,114.988,78.407)
C1': (55.976,114.131,80.626)
C3': (54.447,112.941,81.950)
O5': (56.005,110.343,81.670)
O4': (56.610,113.018,81.230)
C5': (56.163,111.214,82.784)
P: (56.569,108.863,81.748)
C4': (55.852,112.635,82.404)
C2': (54.651,114.322,81.362)
O2': (54.860,115.253,82.403)
N1: (55.791,113.890,79.183)
O4: (55.103,113.442,75.239)
O2: (55.353,116.112,78.867)
C6: (55.919,112.640,78.611)
C5: (55.721,112.420,77.305)
O3': (53.539,113.001,83.034)
Image (generated by PyMOL):