Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:926:954
Extra
PDB:
ATOM 1 O3' C A 25 61.219 12.240 96.237 1.00 76.85 O
ATOM 2 P C A 26 62.771 12.640 96.209 1.00 73.44 P
ATOM 3 OP1 C A 26 63.023 13.243 94.872 1.00 73.56 O
ATOM 4 OP2 C A 26 63.577 11.476 96.654 1.00 72.95 O
ATOM 5 O5' C A 26 62.870 13.767 97.326 1.00 72.21 O
ATOM 6 C5' C A 26 62.162 15.015 97.183 1.00 72.70 C
ATOM 7 C4' C A 26 62.560 15.970 98.286 1.00 72.88 C
ATOM 8 O4' C A 26 61.903 15.619 99.534 1.00 73.79 O
ATOM 9 C3' C A 26 64.036 15.942 98.627 1.00 71.78 C
ATOM 10 O3' C A 26 64.801 16.701 97.720 1.00 70.22 O
ATOM 11 C2' C A 26 64.057 16.472 100.047 1.00 71.18 C
ATOM 12 O2' C A 26 63.900 17.874 100.081 1.00 71.86 O
ATOM 13 C1' C A 26 62.804 15.804 100.619 1.00 72.06 C
ATOM 14 N1 C A 26 63.079 14.481 101.215 1.00 72.38 N
ATOM 15 C2 C A 26 63.554 14.412 102.532 1.00 72.90 C
ATOM 16 O2 C A 26 63.734 15.463 103.171 1.00 71.82 O
ATOM 17 N3 C A 26 63.811 13.197 103.073 1.00 73.64 N
ATOM 18 C4 C A 26 63.618 12.088 102.355 1.00 72.84 C
ATOM 19 N4 C A 26 63.901 10.919 102.928 1.00 73.67 N
ATOM 20 C5 C A 26 63.131 12.129 101.020 1.00 71.63 C
ATOM 21 C6 C A 26 62.876 13.331 100.495 1.00 71.99 C
ATOM 22 P U A 27 66.364 16.404 97.587 1.00 69.93 P
ATOM 23 OP1 U A 27 66.821 16.946 96.283 1.00 70.89 O
ATOM 24 OP2 U A 27 66.590 14.972 97.904 1.00 71.41 O
ATOM 25 O5' U A 27 66.974 17.270 98.768 1.00 67.73 O
TER
ATOM 1 O3' A B 53 69.432 6.765 112.456 1.00 87.79 O
ATOM 2 P U B 54 67.891 6.742 112.922 1.00 88.42 P
ATOM 3 OP1 U B 54 67.890 6.511 114.388 1.00 87.40 O
ATOM 4 OP2 U B 54 67.123 5.830 112.029 1.00 88.48 O
ATOM 5 O5' U B 54 67.387 8.232 112.669 1.00 88.46 O
ATOM 6 C5' U B 54 68.179 9.347 113.118 1.00 87.63 C
ATOM 7 C4' U B 54 67.496 10.663 112.818 1.00 85.38 C
ATOM 8 O4' U B 54 67.402 10.881 111.380 1.00 85.28 O
ATOM 9 C3' U B 54 66.096 10.863 113.381 1.00 83.70 C
ATOM 10 O3' U B 54 66.007 12.188 113.866 1.00 83.15 O
ATOM 11 C2' U B 54 65.207 10.688 112.153 1.00 83.91 C
ATOM 12 O2' U B 54 63.987 11.395 112.233 1.00 84.26 O
ATOM 13 C1' U B 54 66.089 11.286 111.059 1.00 84.08 C
ATOM 14 N1 U B 54 65.773 10.868 109.681 1.00 83.21 N
ATOM 15 C2 U B 54 65.884 11.823 108.684 1.00 82.25 C
ATOM 16 O2 U B 54 66.278 12.956 108.889 1.00 83.46 O
ATOM 17 N3 U B 54 65.522 11.402 107.432 1.00 80.65 N
ATOM 18 C4 U B 54 65.087 10.151 107.074 1.00 81.20 C
ATOM 19 O4 U B 54 64.768 9.937 105.904 1.00 81.79 O
ATOM 20 C5 U B 54 65.028 9.208 108.146 1.00 81.44 C
ATOM 21 C6 U B 54 65.364 9.587 109.381 1.00 82.34 C
ATOM 22 P A B 55 66.390 12.495 115.394 1.00 83.89 P
ATOM 23 OP1 A B 55 66.249 11.218 116.140 1.00 83.81 O
ATOM 24 OP2 A B 55 65.623 13.693 115.836 1.00 84.27 O
ATOM 25 O5' A B 55 67.938 12.881 115.340 1.00 81.84 O
TER
ATOM 2 P C A 26 62.771 12.640 96.209 1.00 73.44 P
ATOM 3 OP1 C A 26 63.023 13.243 94.872 1.00 73.56 O
ATOM 4 OP2 C A 26 63.577 11.476 96.654 1.00 72.95 O
ATOM 5 O5' C A 26 62.870 13.767 97.326 1.00 72.21 O
ATOM 6 C5' C A 26 62.162 15.015 97.183 1.00 72.70 C
ATOM 7 C4' C A 26 62.560 15.970 98.286 1.00 72.88 C
ATOM 8 O4' C A 26 61.903 15.619 99.534 1.00 73.79 O
ATOM 9 C3' C A 26 64.036 15.942 98.627 1.00 71.78 C
ATOM 10 O3' C A 26 64.801 16.701 97.720 1.00 70.22 O
ATOM 11 C2' C A 26 64.057 16.472 100.047 1.00 71.18 C
ATOM 12 O2' C A 26 63.900 17.874 100.081 1.00 71.86 O
ATOM 13 C1' C A 26 62.804 15.804 100.619 1.00 72.06 C
ATOM 14 N1 C A 26 63.079 14.481 101.215 1.00 72.38 N
ATOM 15 C2 C A 26 63.554 14.412 102.532 1.00 72.90 C
ATOM 16 O2 C A 26 63.734 15.463 103.171 1.00 71.82 O
ATOM 17 N3 C A 26 63.811 13.197 103.073 1.00 73.64 N
ATOM 18 C4 C A 26 63.618 12.088 102.355 1.00 72.84 C
ATOM 19 N4 C A 26 63.901 10.919 102.928 1.00 73.67 N
ATOM 20 C5 C A 26 63.131 12.129 101.020 1.00 71.63 C
ATOM 21 C6 C A 26 62.876 13.331 100.495 1.00 71.99 C
ATOM 22 P U A 27 66.364 16.404 97.587 1.00 69.93 P
ATOM 23 OP1 U A 27 66.821 16.946 96.283 1.00 70.89 O
ATOM 24 OP2 U A 27 66.590 14.972 97.904 1.00 71.41 O
ATOM 25 O5' U A 27 66.974 17.270 98.768 1.00 67.73 O
TER
ATOM 1 O3' A B 53 69.432 6.765 112.456 1.00 87.79 O
ATOM 2 P U B 54 67.891 6.742 112.922 1.00 88.42 P
ATOM 3 OP1 U B 54 67.890 6.511 114.388 1.00 87.40 O
ATOM 4 OP2 U B 54 67.123 5.830 112.029 1.00 88.48 O
ATOM 5 O5' U B 54 67.387 8.232 112.669 1.00 88.46 O
ATOM 6 C5' U B 54 68.179 9.347 113.118 1.00 87.63 C
ATOM 7 C4' U B 54 67.496 10.663 112.818 1.00 85.38 C
ATOM 8 O4' U B 54 67.402 10.881 111.380 1.00 85.28 O
ATOM 9 C3' U B 54 66.096 10.863 113.381 1.00 83.70 C
ATOM 10 O3' U B 54 66.007 12.188 113.866 1.00 83.15 O
ATOM 11 C2' U B 54 65.207 10.688 112.153 1.00 83.91 C
ATOM 12 O2' U B 54 63.987 11.395 112.233 1.00 84.26 O
ATOM 13 C1' U B 54 66.089 11.286 111.059 1.00 84.08 C
ATOM 14 N1 U B 54 65.773 10.868 109.681 1.00 83.21 N
ATOM 15 C2 U B 54 65.884 11.823 108.684 1.00 82.25 C
ATOM 16 O2 U B 54 66.278 12.956 108.889 1.00 83.46 O
ATOM 17 N3 U B 54 65.522 11.402 107.432 1.00 80.65 N
ATOM 18 C4 U B 54 65.087 10.151 107.074 1.00 81.20 C
ATOM 19 O4 U B 54 64.768 9.937 105.904 1.00 81.79 O
ATOM 20 C5 U B 54 65.028 9.208 108.146 1.00 81.44 C
ATOM 21 C6 U B 54 65.364 9.587 109.381 1.00 82.34 C
ATOM 22 P A B 55 66.390 12.495 115.394 1.00 83.89 P
ATOM 23 OP1 A B 55 66.249 11.218 116.140 1.00 83.81 O
ATOM 24 OP2 A B 55 65.623 13.693 115.836 1.00 84.27 O
ATOM 25 O5' A B 55 67.938 12.881 115.340 1.00 81.84 O
TER
Atoms:
C2: (63.554,14.412,102.532)
OP1: (63.023,13.243,94.872)
OP2: (63.577,11.476,96.654)
C4: (63.618,12.088,102.355)
O5': (62.870,13.767,97.326)
C3': (64.036,15.942,98.627)
C1': (62.804,15.804,100.619)
O4': (61.903,15.619,99.534)
C5': (62.162,15.015,97.183)
P: (62.771,12.640,96.209)
O2: (63.734,15.463,103.171)
C4': (62.560,15.970,98.286)
C2': (64.057,16.472,100.047)
O2': (63.900,17.874,100.081)
N1: (63.079,14.481,101.215)
N3: (63.811,13.197,103.073)
N4: (63.901,10.919,102.928)
C6: (62.876,13.331,100.495)
C5: (63.131,12.129,101.020)
O3': (64.801,16.701,97.720)
OP1: (63.023,13.243,94.872)
OP2: (63.577,11.476,96.654)
C4: (63.618,12.088,102.355)
O5': (62.870,13.767,97.326)
C3': (64.036,15.942,98.627)
C1': (62.804,15.804,100.619)
O4': (61.903,15.619,99.534)
C5': (62.162,15.015,97.183)
P: (62.771,12.640,96.209)
O2: (63.734,15.463,103.171)
C4': (62.560,15.970,98.286)
C2': (64.057,16.472,100.047)
O2': (63.900,17.874,100.081)
N1: (63.079,14.481,101.215)
N3: (63.811,13.197,103.073)
N4: (63.901,10.919,102.928)
C6: (62.876,13.331,100.495)
C5: (63.131,12.129,101.020)
O3': (64.801,16.701,97.720)
C4: (65.087,10.151,107.074)
N3: (65.522,11.402,107.432)
OP1: (67.890,6.511,114.388)
OP2: (67.123,5.830,112.029)
C2: (65.884,11.823,108.684)
C1': (66.089,11.286,111.059)
C3': (66.096,10.863,113.381)
O5': (67.387,8.232,112.669)
O4': (67.402,10.881,111.380)
C5': (68.179,9.347,113.118)
P: (67.891,6.742,112.922)
C4': (67.496,10.663,112.818)
C2': (65.207,10.688,112.153)
O2': (63.987,11.395,112.233)
N1: (65.773,10.868,109.681)
O4: (64.768,9.937,105.904)
O2: (66.278,12.956,108.889)
C6: (65.364,9.587,109.381)
C5: (65.028,9.208,108.146)
O3': (66.007,12.188,113.866)
N3: (65.522,11.402,107.432)
OP1: (67.890,6.511,114.388)
OP2: (67.123,5.830,112.029)
C2: (65.884,11.823,108.684)
C1': (66.089,11.286,111.059)
C3': (66.096,10.863,113.381)
O5': (67.387,8.232,112.669)
O4': (67.402,10.881,111.380)
C5': (68.179,9.347,113.118)
P: (67.891,6.742,112.922)
C4': (67.496,10.663,112.818)
C2': (65.207,10.688,112.153)
O2': (63.987,11.395,112.233)
N1: (65.773,10.868,109.681)
O4: (64.768,9.937,105.904)
O2: (66.278,12.956,108.889)
C6: (65.364,9.587,109.381)
C5: (65.028,9.208,108.146)
O3': (66.007,12.188,113.866)
Image (generated by PyMOL):