Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0751:0887
Extra
PDB:
ATOM 1 O3' C A 750 51.017 117.228 65.429 1.00 29.38 O
ATOM 2 P C A 751 52.596 117.277 65.673 1.00 33.25 P
ATOM 3 OP1 C A 751 53.182 118.075 64.570 1.00 34.38 O
ATOM 4 OP2 C A 751 53.080 115.898 65.911 1.00 32.95 O
ATOM 5 O5' C A 751 52.740 118.085 67.041 1.00 32.99 O
ATOM 6 C5' C A 751 52.288 119.449 67.133 1.00 33.36 C
ATOM 7 C4' C A 751 52.449 119.979 68.541 1.00 32.81 C
ATOM 8 O4' C A 751 51.608 119.227 69.448 1.00 31.66 O
ATOM 9 C3' C A 751 53.820 119.884 69.189 1.00 31.65 C
ATOM 10 O3' C A 751 54.731 120.882 68.755 1.00 29.99 O
ATOM 11 C2' C A 751 53.462 120.066 70.654 1.00 32.16 C
ATOM 12 O2' C A 751 53.161 121.402 70.992 1.00 31.69 O
ATOM 13 C1' C A 751 52.191 119.228 70.740 1.00 32.65 C
ATOM 14 N1 C A 751 52.532 117.847 71.116 1.00 34.43 N
ATOM 15 C2 C A 751 52.697 117.546 72.470 1.00 35.43 C
ATOM 16 O2 C A 751 52.499 118.438 73.312 1.00 37.47 O
ATOM 17 N3 C A 751 53.069 116.299 72.828 1.00 36.27 N
ATOM 18 C4 C A 751 53.272 115.369 71.895 1.00 36.64 C
ATOM 19 N4 C A 751 53.672 114.155 72.293 1.00 37.75 N
ATOM 20 C5 C A 751 53.083 115.640 70.512 1.00 36.19 C
ATOM 21 C6 C A 751 52.714 116.880 70.170 1.00 34.87 C
ATOM 22 P G A 752 56.297 120.541 68.667 1.00 30.91 P
ATOM 23 OP1 G A 752 56.970 121.738 68.118 1.00 30.59 O
ATOM 24 OP2 G A 752 56.444 119.241 67.981 1.00 30.68 O
ATOM 25 O5' G A 752 56.769 120.342 70.178 1.00 31.80 O
TER
ATOM 1 O3' C B 886 57.856 108.841 81.209 1.00 30.61 O
ATOM 2 P U B 887 56.271 108.637 81.354 1.00 30.53 P
ATOM 3 OP1 U B 887 56.054 108.081 82.709 1.00 26.66 O
ATOM 4 OP2 U B 887 55.787 107.887 80.161 1.00 29.12 O
ATOM 5 O5' U B 887 55.692 110.119 81.339 1.00 29.84 O
ATOM 6 C5' U B 887 55.968 110.992 82.439 1.00 32.96 C
ATOM 7 C4' U B 887 55.646 112.427 82.103 1.00 33.60 C
ATOM 8 O4' U B 887 56.416 112.875 80.958 1.00 34.74 O
ATOM 9 C3' U B 887 54.236 112.762 81.672 1.00 34.00 C
ATOM 10 O3' U B 887 53.301 112.756 82.737 1.00 33.23 O
ATOM 11 C2' U B 887 54.440 114.164 81.119 1.00 34.45 C
ATOM 12 O2' U B 887 54.620 115.120 82.146 1.00 33.43 O
ATOM 13 C1' U B 887 55.755 113.984 80.362 1.00 35.03 C
ATOM 14 N1 U B 887 55.516 113.718 78.932 1.00 37.00 N
ATOM 15 C2 U B 887 55.110 114.794 78.151 1.00 37.53 C
ATOM 16 O2 U B 887 55.000 115.927 78.592 1.00 40.05 O
ATOM 17 N3 U B 887 54.845 114.499 76.838 1.00 36.59 N
ATOM 18 C4 U B 887 54.954 113.273 76.226 1.00 37.41 C
ATOM 19 O4 U B 887 54.642 113.167 75.041 1.00 38.04 O
ATOM 20 C5 U B 887 55.407 112.211 77.082 1.00 36.98 C
ATOM 21 C6 U B 887 55.665 112.462 78.374 1.00 37.01 C
ATOM 22 P G B 888 51.758 112.453 82.417 1.00 33.65 P
ATOM 23 OP1 G B 888 50.987 112.561 83.683 1.00 31.78 O
ATOM 24 OP2 G B 888 51.699 111.200 81.622 1.00 33.73 O
ATOM 25 O5' G B 888 51.327 113.654 81.471 1.00 29.78 O
TER
ATOM 2 P C A 751 52.596 117.277 65.673 1.00 33.25 P
ATOM 3 OP1 C A 751 53.182 118.075 64.570 1.00 34.38 O
ATOM 4 OP2 C A 751 53.080 115.898 65.911 1.00 32.95 O
ATOM 5 O5' C A 751 52.740 118.085 67.041 1.00 32.99 O
ATOM 6 C5' C A 751 52.288 119.449 67.133 1.00 33.36 C
ATOM 7 C4' C A 751 52.449 119.979 68.541 1.00 32.81 C
ATOM 8 O4' C A 751 51.608 119.227 69.448 1.00 31.66 O
ATOM 9 C3' C A 751 53.820 119.884 69.189 1.00 31.65 C
ATOM 10 O3' C A 751 54.731 120.882 68.755 1.00 29.99 O
ATOM 11 C2' C A 751 53.462 120.066 70.654 1.00 32.16 C
ATOM 12 O2' C A 751 53.161 121.402 70.992 1.00 31.69 O
ATOM 13 C1' C A 751 52.191 119.228 70.740 1.00 32.65 C
ATOM 14 N1 C A 751 52.532 117.847 71.116 1.00 34.43 N
ATOM 15 C2 C A 751 52.697 117.546 72.470 1.00 35.43 C
ATOM 16 O2 C A 751 52.499 118.438 73.312 1.00 37.47 O
ATOM 17 N3 C A 751 53.069 116.299 72.828 1.00 36.27 N
ATOM 18 C4 C A 751 53.272 115.369 71.895 1.00 36.64 C
ATOM 19 N4 C A 751 53.672 114.155 72.293 1.00 37.75 N
ATOM 20 C5 C A 751 53.083 115.640 70.512 1.00 36.19 C
ATOM 21 C6 C A 751 52.714 116.880 70.170 1.00 34.87 C
ATOM 22 P G A 752 56.297 120.541 68.667 1.00 30.91 P
ATOM 23 OP1 G A 752 56.970 121.738 68.118 1.00 30.59 O
ATOM 24 OP2 G A 752 56.444 119.241 67.981 1.00 30.68 O
ATOM 25 O5' G A 752 56.769 120.342 70.178 1.00 31.80 O
TER
ATOM 1 O3' C B 886 57.856 108.841 81.209 1.00 30.61 O
ATOM 2 P U B 887 56.271 108.637 81.354 1.00 30.53 P
ATOM 3 OP1 U B 887 56.054 108.081 82.709 1.00 26.66 O
ATOM 4 OP2 U B 887 55.787 107.887 80.161 1.00 29.12 O
ATOM 5 O5' U B 887 55.692 110.119 81.339 1.00 29.84 O
ATOM 6 C5' U B 887 55.968 110.992 82.439 1.00 32.96 C
ATOM 7 C4' U B 887 55.646 112.427 82.103 1.00 33.60 C
ATOM 8 O4' U B 887 56.416 112.875 80.958 1.00 34.74 O
ATOM 9 C3' U B 887 54.236 112.762 81.672 1.00 34.00 C
ATOM 10 O3' U B 887 53.301 112.756 82.737 1.00 33.23 O
ATOM 11 C2' U B 887 54.440 114.164 81.119 1.00 34.45 C
ATOM 12 O2' U B 887 54.620 115.120 82.146 1.00 33.43 O
ATOM 13 C1' U B 887 55.755 113.984 80.362 1.00 35.03 C
ATOM 14 N1 U B 887 55.516 113.718 78.932 1.00 37.00 N
ATOM 15 C2 U B 887 55.110 114.794 78.151 1.00 37.53 C
ATOM 16 O2 U B 887 55.000 115.927 78.592 1.00 40.05 O
ATOM 17 N3 U B 887 54.845 114.499 76.838 1.00 36.59 N
ATOM 18 C4 U B 887 54.954 113.273 76.226 1.00 37.41 C
ATOM 19 O4 U B 887 54.642 113.167 75.041 1.00 38.04 O
ATOM 20 C5 U B 887 55.407 112.211 77.082 1.00 36.98 C
ATOM 21 C6 U B 887 55.665 112.462 78.374 1.00 37.01 C
ATOM 22 P G B 888 51.758 112.453 82.417 1.00 33.65 P
ATOM 23 OP1 G B 888 50.987 112.561 83.683 1.00 31.78 O
ATOM 24 OP2 G B 888 51.699 111.200 81.622 1.00 33.73 O
ATOM 25 O5' G B 888 51.327 113.654 81.471 1.00 29.78 O
TER
Atoms:
C2: (52.697,117.546,72.470)
OP1: (53.182,118.075,64.570)
OP2: (53.080,115.898,65.911)
C4: (53.272,115.369,71.895)
O5': (52.740,118.085,67.041)
C3': (53.820,119.884,69.189)
C1': (52.191,119.228,70.740)
O4': (51.608,119.227,69.448)
C5': (52.288,119.449,67.133)
P: (52.596,117.277,65.673)
O2: (52.499,118.438,73.312)
C4': (52.449,119.979,68.541)
C2': (53.462,120.066,70.654)
O2': (53.161,121.402,70.992)
N1: (52.532,117.847,71.116)
N3: (53.069,116.299,72.828)
N4: (53.672,114.155,72.293)
C6: (52.714,116.880,70.170)
C5: (53.083,115.640,70.512)
O3': (54.731,120.882,68.755)
OP1: (53.182,118.075,64.570)
OP2: (53.080,115.898,65.911)
C4: (53.272,115.369,71.895)
O5': (52.740,118.085,67.041)
C3': (53.820,119.884,69.189)
C1': (52.191,119.228,70.740)
O4': (51.608,119.227,69.448)
C5': (52.288,119.449,67.133)
P: (52.596,117.277,65.673)
O2: (52.499,118.438,73.312)
C4': (52.449,119.979,68.541)
C2': (53.462,120.066,70.654)
O2': (53.161,121.402,70.992)
N1: (52.532,117.847,71.116)
N3: (53.069,116.299,72.828)
N4: (53.672,114.155,72.293)
C6: (52.714,116.880,70.170)
C5: (53.083,115.640,70.512)
O3': (54.731,120.882,68.755)
C4: (54.954,113.273,76.226)
N3: (54.845,114.499,76.838)
OP1: (56.054,108.081,82.709)
OP2: (55.787,107.887,80.161)
C2: (55.110,114.794,78.151)
C1': (55.755,113.984,80.362)
C3': (54.236,112.762,81.672)
O5': (55.692,110.119,81.339)
O4': (56.416,112.875,80.958)
C5': (55.968,110.992,82.439)
P: (56.271,108.637,81.354)
C4': (55.646,112.427,82.103)
C2': (54.440,114.164,81.119)
O2': (54.620,115.120,82.146)
N1: (55.516,113.718,78.932)
O4: (54.642,113.167,75.041)
O2: (55.000,115.927,78.592)
C6: (55.665,112.462,78.374)
C5: (55.407,112.211,77.082)
O3': (53.301,112.756,82.737)
N3: (54.845,114.499,76.838)
OP1: (56.054,108.081,82.709)
OP2: (55.787,107.887,80.161)
C2: (55.110,114.794,78.151)
C1': (55.755,113.984,80.362)
C3': (54.236,112.762,81.672)
O5': (55.692,110.119,81.339)
O4': (56.416,112.875,80.958)
C5': (55.968,110.992,82.439)
P: (56.271,108.637,81.354)
C4': (55.646,112.427,82.103)
C2': (54.440,114.164,81.119)
O2': (54.620,115.120,82.146)
N1: (55.516,113.718,78.932)
O4: (54.642,113.167,75.041)
O2: (55.000,115.927,78.592)
C6: (55.665,112.462,78.374)
C5: (55.407,112.211,77.082)
O3': (53.301,112.756,82.737)
Image (generated by PyMOL):