Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJW:0751:0887
Extra
PDB:
ATOM 1 O3' C A 750 50.764 117.088 65.589 1.00 21.78 O
ATOM 2 P C A 751 52.351 117.149 65.737 1.00 23.33 P
ATOM 3 OP1 C A 751 52.858 117.999 64.636 1.00 23.58 O
ATOM 4 OP2 C A 751 52.864 115.761 65.892 1.00 24.46 O
ATOM 5 O5' C A 751 52.563 117.908 67.116 1.00 19.15 O
ATOM 6 C5' C A 751 52.174 119.269 67.231 1.00 21.78 C
ATOM 7 C4' C A 751 52.315 119.742 68.645 1.00 22.19 C
ATOM 8 O4' C A 751 51.491 118.927 69.512 1.00 23.09 O
ATOM 9 C3' C A 751 53.679 119.628 69.287 1.00 21.89 C
ATOM 10 O3' C A 751 54.575 120.639 68.861 1.00 21.02 O
ATOM 11 C2' C A 751 53.305 119.795 70.747 1.00 23.57 C
ATOM 12 O2' C A 751 52.992 121.137 71.054 1.00 23.42 O
ATOM 13 C1' C A 751 52.033 118.947 70.820 1.00 23.45 C
ATOM 14 N1 C A 751 52.362 117.573 71.229 1.00 24.71 N
ATOM 15 C2 C A 751 52.525 117.310 72.589 1.00 26.29 C
ATOM 16 O2 C A 751 52.287 118.218 73.409 1.00 28.05 O
ATOM 17 N3 C A 751 52.932 116.076 72.980 1.00 26.64 N
ATOM 18 C4 C A 751 53.158 115.126 72.068 1.00 26.12 C
ATOM 19 N4 C A 751 53.610 113.938 72.493 1.00 26.82 N
ATOM 20 C5 C A 751 52.944 115.353 70.678 1.00 24.87 C
ATOM 21 C6 C A 751 52.548 116.579 70.306 1.00 25.42 C
ATOM 22 P G A 752 56.147 120.311 68.747 1.00 25.15 P
ATOM 23 OP1 G A 752 56.773 121.518 68.164 1.00 25.86 O
ATOM 24 OP2 G A 752 56.345 118.998 68.088 1.00 23.76 O
ATOM 25 O5' G A 752 56.647 120.152 70.251 1.00 23.14 O
TER
ATOM 1 O3' C B 886 57.809 108.697 81.203 1.00 26.56 O
ATOM 2 P U B 887 56.235 108.454 81.397 1.00 28.30 P
ATOM 3 OP1 U B 887 56.081 107.890 82.762 1.00 25.30 O
ATOM 4 OP2 U B 887 55.722 107.693 80.222 1.00 24.54 O
ATOM 5 O5' U B 887 55.617 109.926 81.409 1.00 27.13 O
ATOM 6 C5' U B 887 55.936 110.834 82.480 1.00 27.82 C
ATOM 7 C4' U B 887 55.516 112.255 82.154 1.00 27.52 C
ATOM 8 O4' U B 887 56.280 112.789 81.040 1.00 27.15 O
ATOM 9 C3' U B 887 54.083 112.515 81.722 1.00 27.31 C
ATOM 10 O3' U B 887 53.139 112.498 82.782 1.00 25.67 O
ATOM 11 C2' U B 887 54.201 113.924 81.167 1.00 27.86 C
ATOM 12 O2' U B 887 54.295 114.881 82.200 1.00 28.53 O
ATOM 13 C1' U B 887 55.537 113.843 80.433 1.00 27.92 C
ATOM 14 N1 U B 887 55.333 113.574 78.997 1.00 29.38 N
ATOM 15 C2 U B 887 54.932 114.645 78.212 1.00 29.25 C
ATOM 16 O2 U B 887 54.785 115.768 78.657 1.00 30.63 O
ATOM 17 N3 U B 887 54.712 114.354 76.888 1.00 29.24 N
ATOM 18 C4 U B 887 54.854 113.134 76.271 1.00 29.87 C
ATOM 19 O4 U B 887 54.579 113.029 75.073 1.00 29.92 O
ATOM 20 C5 U B 887 55.292 112.074 77.136 1.00 29.64 C
ATOM 21 C6 U B 887 55.509 112.322 78.436 1.00 29.56 C
ATOM 22 P G B 888 51.586 112.312 82.437 1.00 25.06 P
ATOM 23 OP1 G B 888 50.770 112.449 83.671 1.00 22.99 O
ATOM 24 OP2 G B 888 51.489 111.086 81.627 1.00 24.98 O
ATOM 25 O5' G B 888 51.257 113.535 81.479 1.00 23.10 O
TER
ATOM 2 P C A 751 52.351 117.149 65.737 1.00 23.33 P
ATOM 3 OP1 C A 751 52.858 117.999 64.636 1.00 23.58 O
ATOM 4 OP2 C A 751 52.864 115.761 65.892 1.00 24.46 O
ATOM 5 O5' C A 751 52.563 117.908 67.116 1.00 19.15 O
ATOM 6 C5' C A 751 52.174 119.269 67.231 1.00 21.78 C
ATOM 7 C4' C A 751 52.315 119.742 68.645 1.00 22.19 C
ATOM 8 O4' C A 751 51.491 118.927 69.512 1.00 23.09 O
ATOM 9 C3' C A 751 53.679 119.628 69.287 1.00 21.89 C
ATOM 10 O3' C A 751 54.575 120.639 68.861 1.00 21.02 O
ATOM 11 C2' C A 751 53.305 119.795 70.747 1.00 23.57 C
ATOM 12 O2' C A 751 52.992 121.137 71.054 1.00 23.42 O
ATOM 13 C1' C A 751 52.033 118.947 70.820 1.00 23.45 C
ATOM 14 N1 C A 751 52.362 117.573 71.229 1.00 24.71 N
ATOM 15 C2 C A 751 52.525 117.310 72.589 1.00 26.29 C
ATOM 16 O2 C A 751 52.287 118.218 73.409 1.00 28.05 O
ATOM 17 N3 C A 751 52.932 116.076 72.980 1.00 26.64 N
ATOM 18 C4 C A 751 53.158 115.126 72.068 1.00 26.12 C
ATOM 19 N4 C A 751 53.610 113.938 72.493 1.00 26.82 N
ATOM 20 C5 C A 751 52.944 115.353 70.678 1.00 24.87 C
ATOM 21 C6 C A 751 52.548 116.579 70.306 1.00 25.42 C
ATOM 22 P G A 752 56.147 120.311 68.747 1.00 25.15 P
ATOM 23 OP1 G A 752 56.773 121.518 68.164 1.00 25.86 O
ATOM 24 OP2 G A 752 56.345 118.998 68.088 1.00 23.76 O
ATOM 25 O5' G A 752 56.647 120.152 70.251 1.00 23.14 O
TER
ATOM 1 O3' C B 886 57.809 108.697 81.203 1.00 26.56 O
ATOM 2 P U B 887 56.235 108.454 81.397 1.00 28.30 P
ATOM 3 OP1 U B 887 56.081 107.890 82.762 1.00 25.30 O
ATOM 4 OP2 U B 887 55.722 107.693 80.222 1.00 24.54 O
ATOM 5 O5' U B 887 55.617 109.926 81.409 1.00 27.13 O
ATOM 6 C5' U B 887 55.936 110.834 82.480 1.00 27.82 C
ATOM 7 C4' U B 887 55.516 112.255 82.154 1.00 27.52 C
ATOM 8 O4' U B 887 56.280 112.789 81.040 1.00 27.15 O
ATOM 9 C3' U B 887 54.083 112.515 81.722 1.00 27.31 C
ATOM 10 O3' U B 887 53.139 112.498 82.782 1.00 25.67 O
ATOM 11 C2' U B 887 54.201 113.924 81.167 1.00 27.86 C
ATOM 12 O2' U B 887 54.295 114.881 82.200 1.00 28.53 O
ATOM 13 C1' U B 887 55.537 113.843 80.433 1.00 27.92 C
ATOM 14 N1 U B 887 55.333 113.574 78.997 1.00 29.38 N
ATOM 15 C2 U B 887 54.932 114.645 78.212 1.00 29.25 C
ATOM 16 O2 U B 887 54.785 115.768 78.657 1.00 30.63 O
ATOM 17 N3 U B 887 54.712 114.354 76.888 1.00 29.24 N
ATOM 18 C4 U B 887 54.854 113.134 76.271 1.00 29.87 C
ATOM 19 O4 U B 887 54.579 113.029 75.073 1.00 29.92 O
ATOM 20 C5 U B 887 55.292 112.074 77.136 1.00 29.64 C
ATOM 21 C6 U B 887 55.509 112.322 78.436 1.00 29.56 C
ATOM 22 P G B 888 51.586 112.312 82.437 1.00 25.06 P
ATOM 23 OP1 G B 888 50.770 112.449 83.671 1.00 22.99 O
ATOM 24 OP2 G B 888 51.489 111.086 81.627 1.00 24.98 O
ATOM 25 O5' G B 888 51.257 113.535 81.479 1.00 23.10 O
TER
Atoms:
C2: (52.525,117.310,72.589)
OP1: (52.858,117.999,64.636)
OP2: (52.864,115.761,65.892)
C4: (53.158,115.126,72.068)
O5': (52.563,117.908,67.116)
C3': (53.679,119.628,69.287)
C1': (52.033,118.947,70.820)
O4': (51.491,118.927,69.512)
C5': (52.174,119.269,67.231)
P: (52.351,117.149,65.737)
O2: (52.287,118.218,73.409)
C4': (52.315,119.742,68.645)
C2': (53.305,119.795,70.747)
O2': (52.992,121.137,71.054)
N1: (52.362,117.573,71.229)
N3: (52.932,116.076,72.980)
N4: (53.610,113.938,72.493)
C6: (52.548,116.579,70.306)
C5: (52.944,115.353,70.678)
O3': (54.575,120.639,68.861)
OP1: (52.858,117.999,64.636)
OP2: (52.864,115.761,65.892)
C4: (53.158,115.126,72.068)
O5': (52.563,117.908,67.116)
C3': (53.679,119.628,69.287)
C1': (52.033,118.947,70.820)
O4': (51.491,118.927,69.512)
C5': (52.174,119.269,67.231)
P: (52.351,117.149,65.737)
O2: (52.287,118.218,73.409)
C4': (52.315,119.742,68.645)
C2': (53.305,119.795,70.747)
O2': (52.992,121.137,71.054)
N1: (52.362,117.573,71.229)
N3: (52.932,116.076,72.980)
N4: (53.610,113.938,72.493)
C6: (52.548,116.579,70.306)
C5: (52.944,115.353,70.678)
O3': (54.575,120.639,68.861)
C4: (54.854,113.134,76.271)
N3: (54.712,114.354,76.888)
OP1: (56.081,107.890,82.762)
OP2: (55.722,107.693,80.222)
C2: (54.932,114.645,78.212)
C1': (55.537,113.843,80.433)
C3': (54.083,112.515,81.722)
O5': (55.617,109.926,81.409)
O4': (56.280,112.789,81.040)
C5': (55.936,110.834,82.480)
P: (56.235,108.454,81.397)
C4': (55.516,112.255,82.154)
C2': (54.201,113.924,81.167)
O2': (54.295,114.881,82.200)
N1: (55.333,113.574,78.997)
O4: (54.579,113.029,75.073)
O2: (54.785,115.768,78.657)
C6: (55.509,112.322,78.436)
C5: (55.292,112.074,77.136)
O3': (53.139,112.498,82.782)
N3: (54.712,114.354,76.888)
OP1: (56.081,107.890,82.762)
OP2: (55.722,107.693,80.222)
C2: (54.932,114.645,78.212)
C1': (55.537,113.843,80.433)
C3': (54.083,112.515,81.722)
O5': (55.617,109.926,81.409)
O4': (56.280,112.789,81.040)
C5': (55.936,110.834,82.480)
P: (56.235,108.454,81.397)
C4': (55.516,112.255,82.154)
C2': (54.201,113.924,81.167)
O2': (54.295,114.881,82.200)
N1: (55.333,113.574,78.997)
O4: (54.579,113.029,75.073)
O2: (54.785,115.768,78.657)
C6: (55.509,112.322,78.436)
C5: (55.292,112.074,77.136)
O3': (53.139,112.498,82.782)
Image (generated by PyMOL):