ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1B23:R45:R46

Extra

PDB:
ATOM 1 O3' A A 44 10.642 37.936 -3.624 1.00 74.12 O
ATOM 2 P G A 45 9.846 37.849 -2.222 1.00 70.35 P
ATOM 3 OP1 G A 45 8.589 37.101 -2.470 1.00 70.85 O
ATOM 4 OP2 G A 45 9.780 39.194 -1.604 1.00 71.23 O
ATOM 5 O5' G A 45 10.797 36.951 -1.312 1.00 69.85 O
ATOM 6 C5' G A 45 10.940 37.196 0.105 1.00 64.17 C
ATOM 7 C4' G A 45 12.333 37.706 0.399 1.00 61.85 C
ATOM 8 O4' G A 45 12.507 38.971 -0.291 1.00 60.07 O
ATOM 9 C3' G A 45 12.658 37.966 1.867 1.00 57.59 C
ATOM 10 O3' G A 45 14.045 37.683 2.077 1.00 53.70 O
ATOM 11 C2' G A 45 12.410 39.465 2.007 1.00 57.75 C
ATOM 12 O2' G A 45 13.173 40.072 3.029 1.00 58.79 O
ATOM 13 C1' G A 45 12.838 39.980 0.633 1.00 57.78 C
ATOM 14 N9 G A 45 12.170 41.209 0.223 1.00 57.20 N
ATOM 15 C8 G A 45 10.939 41.333 -0.383 1.00 55.98 C
ATOM 16 N7 G A 45 10.611 42.571 -0.639 1.00 54.95 N
ATOM 17 C5 G A 45 11.691 43.312 -0.170 1.00 56.30 C
ATOM 18 C6 G A 45 11.911 44.717 -0.168 1.00 56.12 C
ATOM 19 O6 G A 45 11.177 45.617 -0.606 1.00 56.59 O
ATOM 20 N1 G A 45 13.135 45.038 0.418 1.00 54.19 N
ATOM 21 C2 G A 45 14.033 44.130 0.926 1.00 52.84 C
ATOM 22 N2 G A 45 15.156 44.630 1.456 1.00 50.89 N
ATOM 23 N3 G A 45 13.843 42.823 0.921 1.00 54.34 N
ATOM 24 C4 G A 45 12.657 42.488 0.363 1.00 56.25 C
ATOM 25 P U A 46 14.483 36.486 3.058 1.00 53.14 P
ATOM 26 OP1 U A 46 13.805 36.695 4.353 1.00 55.93 O
ATOM 27 OP2 U A 46 15.969 36.317 3.018 1.00 39.86 O
ATOM 28 O5' U A 46 13.830 35.200 2.397 1.00 46.17 O
TER

ATOM 1 O3' G B 45 14.045 37.683 2.077 1.00 53.70 O
ATOM 2 P U B 46 14.483 36.486 3.058 1.00 53.14 P
ATOM 3 OP1 U B 46 13.805 36.695 4.353 1.00 55.93 O
ATOM 4 OP2 U B 46 15.969 36.317 3.018 1.00 39.86 O
ATOM 5 O5' U B 46 13.830 35.200 2.397 1.00 46.17 O
ATOM 6 C5' U B 46 14.308 34.688 1.152 1.00 42.83 C
ATOM 7 C4' U B 46 14.144 33.201 1.142 1.00 41.43 C
ATOM 8 O4' U B 46 15.190 32.601 1.939 1.00 42.22 O
ATOM 9 C3' U B 46 12.848 32.770 1.796 1.00 41.62 C
ATOM 10 O3' U B 46 11.779 32.775 0.870 1.00 42.10 O
ATOM 11 C2' U B 46 13.175 31.389 2.335 1.00 47.14 C
ATOM 12 O2' U B 46 13.007 30.384 1.360 1.00 53.21 O
ATOM 13 C1' U B 46 14.655 31.541 2.706 1.00 49.10 C
ATOM 14 N1 U B 46 14.860 31.873 4.124 1.00 52.34 N
ATOM 15 C2 U B 46 14.468 30.944 5.067 1.00 53.51 C
ATOM 16 O2 U B 46 13.967 29.869 4.771 1.00 54.19 O
ATOM 17 N3 U B 46 14.682 31.323 6.372 1.00 52.98 N
ATOM 18 C4 U B 46 15.231 32.509 6.816 1.00 52.22 C
ATOM 19 O4 U B 46 15.327 32.719 8.024 1.00 50.39 O
ATOM 20 C5 U B 46 15.612 33.413 5.777 1.00 53.20 C
ATOM 21 C6 U B 46 15.419 33.073 4.499 1.00 53.42 C
ATOM 22 P C B 47 10.317 33.203 1.363 1.00 42.59 P
ATOM 23 OP1 C B 47 9.399 33.318 0.207 1.00 46.17 O
ATOM 24 OP2 C B 47 10.499 34.364 2.266 1.00 50.61 O
ATOM 25 O5' C B 47 9.862 31.949 2.223 1.00 44.74 O
TER

Atoms:
OP1: (8.589,37.101,-2.470)
OP2: (9.780,39.194,-1.604)
C3': (12.658,37.966,1.867)
C1': (12.838,39.980,0.633)
C5': (10.940,37.196,0.105)
O6: (11.177,45.617,-0.606)
O4': (12.507,38.971,-0.291)
C8: (10.939,41.333,-0.383)
C2: (14.033,44.130,0.926)
C6: (11.911,44.717,-0.168)
C5: (11.691,43.312,-0.170)
C4: (12.657,42.488,0.363)
P: (9.846,37.849,-2.222)
C4': (12.333,37.706,0.399)
C2': (12.410,39.465,2.007)
O2': (13.173,40.072,3.029)
N1: (13.135,45.038,0.418)
N2: (15.156,44.630,1.456)
N3: (13.843,42.823,0.921)
N7: (10.611,42.571,-0.639)
N9: (12.170,41.209,0.223)
O5': (10.797,36.951,-1.312)
O3': (14.045,37.683,2.077)
C4: (15.231,32.509,6.816)
N3: (14.682,31.323,6.372)
OP1: (13.805,36.695,4.353)
OP2: (15.969,36.317,3.018)
C2: (14.468,30.944,5.067)
C1': (14.655,31.541,2.706)
C3': (12.848,32.770,1.796)
O5': (13.830,35.200,2.397)
O4': (15.190,32.601,1.939)
C5': (14.308,34.688,1.152)
P: (14.483,36.486,3.058)
C4': (14.144,33.201,1.142)
C2': (13.175,31.389,2.335)
O2': (13.007,30.384,1.360)
N1: (14.860,31.873,4.124)
O4: (15.327,32.719,8.024)
O2: (13.967,29.869,4.771)
C6: (15.419,33.073,4.499)
C5: (15.612,33.413,5.777)
O3': (11.779,32.775,0.870)
Image (generated by PyMOL):
PyMOL image
show in jmol