Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J00:A865:A234
Extra
PDB:
ATOM 1 O3' A A 864 -20.628 94.438 108.367 1.00 40.46 O
ATOM 2 P C A 865 -19.308 95.126 108.958 1.00 50.13 P
ATOM 3 OP1 C A 865 -19.700 95.543 110.319 1.00 36.09 O
ATOM 4 OP2 C A 865 -18.801 96.133 107.988 1.00 35.01 O
ATOM 5 O5' C A 865 -18.236 93.947 109.057 1.00 19.84 O
ATOM 6 C5' C A 865 -18.458 92.833 109.947 1.00 19.15 C
ATOM 7 C4' C A 865 -17.497 91.693 109.657 1.00 19.55 C
ATOM 8 O4' C A 865 -17.761 91.115 108.354 1.00 21.71 O
ATOM 9 C3' C A 865 -16.020 92.034 109.638 1.00 20.00 C
ATOM 10 O3' C A 865 -15.480 92.086 110.954 1.00 20.02 O
ATOM 11 C2' C A 865 -15.427 90.911 108.784 1.00 21.19 C
ATOM 12 O2' C A 865 -15.140 89.711 109.473 1.00 21.16 O
ATOM 13 C1' C A 865 -16.554 90.647 107.784 1.00 21.48 C
ATOM 14 N1 C A 865 -16.323 91.361 106.521 1.00 13.50 N
ATOM 15 C2 C A 865 -15.487 90.776 105.555 1.00 14.08 C
ATOM 16 O2 C A 865 -14.993 89.653 105.776 1.00 18.32 O
ATOM 17 N3 C A 865 -15.237 91.441 104.414 1.00 13.50 N
ATOM 18 C4 C A 865 -15.785 92.631 104.208 1.00 13.50 C
ATOM 19 N4 C A 865 -15.503 93.249 103.067 1.00 13.50 N
ATOM 20 C5 C A 865 -16.649 93.243 105.163 1.00 13.50 C
ATOM 21 C6 C A 865 -16.890 92.580 106.291 1.00 13.72 C
ATOM 22 P G A 866 -14.262 93.077 111.265 1.00 35.18 P
ATOM 23 OP1 G A 866 -13.970 92.930 112.712 1.00 43.14 O
ATOM 24 OP2 G A 866 -14.585 94.420 110.717 1.00 42.26 O
ATOM 25 O5' G A 866 -13.054 92.468 110.418 1.00 0.79 O
TER
ATOM 1 O3' A B 233 -6.445 86.879 97.978 1.00 37.18 O
ATOM 2 P U B 234 -6.465 88.204 98.924 1.00 62.66 P
ATOM 3 OP1 U B 234 -7.595 89.010 98.390 1.00 69.86 O
ATOM 4 OP2 U B 234 -5.137 88.844 99.084 1.00 72.59 O
ATOM 5 O5' U B 234 -6.946 87.706 100.357 1.00 25.03 O
ATOM 6 C5' U B 234 -7.850 88.509 101.104 1.00 25.83 C
ATOM 7 C4' U B 234 -8.105 87.919 102.461 1.00 26.08 C
ATOM 8 O4' U B 234 -9.056 88.794 103.101 1.00 24.85 O
ATOM 9 C3' U B 234 -8.720 86.525 102.500 1.00 28.20 C
ATOM 10 O3' U B 234 -8.346 85.926 103.754 1.00 29.56 O
ATOM 11 C2' U B 234 -10.220 86.815 102.499 1.00 27.00 C
ATOM 12 O2' U B 234 -10.977 85.831 103.175 1.00 30.21 O
ATOM 13 C1' U B 234 -10.295 88.140 103.255 1.00 26.52 C
ATOM 14 N1 U B 234 -11.327 89.056 102.754 1.00 11.06 N
ATOM 15 C2 U B 234 -12.507 89.148 103.456 1.00 9.42 C
ATOM 16 O2 U B 234 -12.760 88.454 104.438 1.00 9.93 O
ATOM 17 N3 U B 234 -13.391 90.073 102.964 1.00 8.65 N
ATOM 18 C4 U B 234 -13.224 90.874 101.861 1.00 10.20 C
ATOM 19 O4 U B 234 -14.124 91.637 101.533 1.00 14.58 O
ATOM 20 C5 U B 234 -11.994 90.698 101.176 1.00 10.91 C
ATOM 21 C6 U B 234 -11.111 89.818 101.629 1.00 12.09 C
ATOM 22 P C B 235 -7.889 84.376 103.832 1.00 42.15 P
ATOM 23 OP1 C B 235 -8.008 83.764 102.488 1.00 34.02 O
ATOM 24 OP2 C B 235 -8.607 83.766 104.986 1.00 34.32 O
ATOM 25 O5' C B 235 -6.335 84.454 104.184 1.00 16.21 O
TER
ATOM 2 P C A 865 -19.308 95.126 108.958 1.00 50.13 P
ATOM 3 OP1 C A 865 -19.700 95.543 110.319 1.00 36.09 O
ATOM 4 OP2 C A 865 -18.801 96.133 107.988 1.00 35.01 O
ATOM 5 O5' C A 865 -18.236 93.947 109.057 1.00 19.84 O
ATOM 6 C5' C A 865 -18.458 92.833 109.947 1.00 19.15 C
ATOM 7 C4' C A 865 -17.497 91.693 109.657 1.00 19.55 C
ATOM 8 O4' C A 865 -17.761 91.115 108.354 1.00 21.71 O
ATOM 9 C3' C A 865 -16.020 92.034 109.638 1.00 20.00 C
ATOM 10 O3' C A 865 -15.480 92.086 110.954 1.00 20.02 O
ATOM 11 C2' C A 865 -15.427 90.911 108.784 1.00 21.19 C
ATOM 12 O2' C A 865 -15.140 89.711 109.473 1.00 21.16 O
ATOM 13 C1' C A 865 -16.554 90.647 107.784 1.00 21.48 C
ATOM 14 N1 C A 865 -16.323 91.361 106.521 1.00 13.50 N
ATOM 15 C2 C A 865 -15.487 90.776 105.555 1.00 14.08 C
ATOM 16 O2 C A 865 -14.993 89.653 105.776 1.00 18.32 O
ATOM 17 N3 C A 865 -15.237 91.441 104.414 1.00 13.50 N
ATOM 18 C4 C A 865 -15.785 92.631 104.208 1.00 13.50 C
ATOM 19 N4 C A 865 -15.503 93.249 103.067 1.00 13.50 N
ATOM 20 C5 C A 865 -16.649 93.243 105.163 1.00 13.50 C
ATOM 21 C6 C A 865 -16.890 92.580 106.291 1.00 13.72 C
ATOM 22 P G A 866 -14.262 93.077 111.265 1.00 35.18 P
ATOM 23 OP1 G A 866 -13.970 92.930 112.712 1.00 43.14 O
ATOM 24 OP2 G A 866 -14.585 94.420 110.717 1.00 42.26 O
ATOM 25 O5' G A 866 -13.054 92.468 110.418 1.00 0.79 O
TER
ATOM 1 O3' A B 233 -6.445 86.879 97.978 1.00 37.18 O
ATOM 2 P U B 234 -6.465 88.204 98.924 1.00 62.66 P
ATOM 3 OP1 U B 234 -7.595 89.010 98.390 1.00 69.86 O
ATOM 4 OP2 U B 234 -5.137 88.844 99.084 1.00 72.59 O
ATOM 5 O5' U B 234 -6.946 87.706 100.357 1.00 25.03 O
ATOM 6 C5' U B 234 -7.850 88.509 101.104 1.00 25.83 C
ATOM 7 C4' U B 234 -8.105 87.919 102.461 1.00 26.08 C
ATOM 8 O4' U B 234 -9.056 88.794 103.101 1.00 24.85 O
ATOM 9 C3' U B 234 -8.720 86.525 102.500 1.00 28.20 C
ATOM 10 O3' U B 234 -8.346 85.926 103.754 1.00 29.56 O
ATOM 11 C2' U B 234 -10.220 86.815 102.499 1.00 27.00 C
ATOM 12 O2' U B 234 -10.977 85.831 103.175 1.00 30.21 O
ATOM 13 C1' U B 234 -10.295 88.140 103.255 1.00 26.52 C
ATOM 14 N1 U B 234 -11.327 89.056 102.754 1.00 11.06 N
ATOM 15 C2 U B 234 -12.507 89.148 103.456 1.00 9.42 C
ATOM 16 O2 U B 234 -12.760 88.454 104.438 1.00 9.93 O
ATOM 17 N3 U B 234 -13.391 90.073 102.964 1.00 8.65 N
ATOM 18 C4 U B 234 -13.224 90.874 101.861 1.00 10.20 C
ATOM 19 O4 U B 234 -14.124 91.637 101.533 1.00 14.58 O
ATOM 20 C5 U B 234 -11.994 90.698 101.176 1.00 10.91 C
ATOM 21 C6 U B 234 -11.111 89.818 101.629 1.00 12.09 C
ATOM 22 P C B 235 -7.889 84.376 103.832 1.00 42.15 P
ATOM 23 OP1 C B 235 -8.008 83.764 102.488 1.00 34.02 O
ATOM 24 OP2 C B 235 -8.607 83.766 104.986 1.00 34.32 O
ATOM 25 O5' C B 235 -6.335 84.454 104.184 1.00 16.21 O
TER
Atoms:
C2: (-15.487,90.776,105.555)
OP1: (-19.700,95.543,110.319)
OP2: (-18.801,96.133,107.988)
C4: (-15.785,92.631,104.208)
O5': (-18.236,93.947,109.057)
C3': (-16.020,92.034,109.638)
C1': (-16.554,90.647,107.784)
O4': (-17.761,91.115,108.354)
C5': (-18.458,92.833,109.947)
P: (-19.308,95.126,108.958)
O2: (-14.993,89.653,105.776)
C4': (-17.497,91.693,109.657)
C2': (-15.427,90.911,108.784)
O2': (-15.140,89.711,109.473)
N1: (-16.323,91.361,106.521)
N3: (-15.237,91.441,104.414)
N4: (-15.503,93.249,103.067)
C6: (-16.890,92.580,106.291)
C5: (-16.649,93.243,105.163)
O3': (-15.480,92.086,110.954)
OP1: (-19.700,95.543,110.319)
OP2: (-18.801,96.133,107.988)
C4: (-15.785,92.631,104.208)
O5': (-18.236,93.947,109.057)
C3': (-16.020,92.034,109.638)
C1': (-16.554,90.647,107.784)
O4': (-17.761,91.115,108.354)
C5': (-18.458,92.833,109.947)
P: (-19.308,95.126,108.958)
O2: (-14.993,89.653,105.776)
C4': (-17.497,91.693,109.657)
C2': (-15.427,90.911,108.784)
O2': (-15.140,89.711,109.473)
N1: (-16.323,91.361,106.521)
N3: (-15.237,91.441,104.414)
N4: (-15.503,93.249,103.067)
C6: (-16.890,92.580,106.291)
C5: (-16.649,93.243,105.163)
O3': (-15.480,92.086,110.954)
C4: (-13.224,90.874,101.861)
N3: (-13.391,90.073,102.964)
OP1: (-7.595,89.010,98.390)
OP2: (-5.137,88.844,99.084)
C2: (-12.507,89.148,103.456)
C1': (-10.295,88.140,103.255)
C3': (-8.720,86.525,102.500)
O5': (-6.946,87.706,100.357)
O4': (-9.056,88.794,103.101)
C5': (-7.850,88.509,101.104)
P: (-6.465,88.204,98.924)
C4': (-8.105,87.919,102.461)
C2': (-10.220,86.815,102.499)
O2': (-10.977,85.831,103.175)
N1: (-11.327,89.056,102.754)
O4: (-14.124,91.637,101.533)
O2: (-12.760,88.454,104.438)
C6: (-11.111,89.818,101.629)
C5: (-11.994,90.698,101.176)
O3': (-8.346,85.926,103.754)
N3: (-13.391,90.073,102.964)
OP1: (-7.595,89.010,98.390)
OP2: (-5.137,88.844,99.084)
C2: (-12.507,89.148,103.456)
C1': (-10.295,88.140,103.255)
C3': (-8.720,86.525,102.500)
O5': (-6.946,87.706,100.357)
O4': (-9.056,88.794,103.101)
C5': (-7.850,88.509,101.104)
P: (-6.465,88.204,98.924)
C4': (-8.105,87.919,102.461)
C2': (-10.220,86.815,102.499)
O2': (-10.977,85.831,103.175)
N1: (-11.327,89.056,102.754)
O4: (-14.124,91.637,101.533)
O2: (-12.760,88.454,104.438)
C6: (-11.111,89.818,101.629)
C5: (-11.994,90.698,101.176)
O3': (-8.346,85.926,103.754)
Image (generated by PyMOL):