Doublet info:
Details
Nucleotide types:
AC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AM1:B10:B11
Extra
PDB:
ATOM 1 O3' U A 9 5.918 6.174 24.369 1.00 46.87 O
ATOM 2 P A A 10 4.813 7.284 24.719 1.00 84.92 P
ATOM 3 OP1 A A 10 5.410 8.258 25.686 1.00 68.69 O
ATOM 4 OP2 A A 10 3.661 6.432 25.103 1.00 80.20 O
ATOM 5 O5' A A 10 4.493 7.986 23.318 1.00 59.70 O
ATOM 6 C5' A A 10 3.287 8.710 23.078 1.00 54.63 C
ATOM 7 C4' A A 10 2.841 8.506 21.655 1.00 63.84 C
ATOM 8 O4' A A 10 3.902 8.964 20.775 1.00 67.96 O
ATOM 9 C3' A A 10 2.612 7.046 21.291 1.00 63.43 C
ATOM 10 O3' A A 10 1.647 6.968 20.249 1.00 67.87 O
ATOM 11 C2' A A 10 3.966 6.608 20.757 1.00 60.13 C
ATOM 12 O2' A A 10 3.900 5.516 19.864 1.00 57.17 O
ATOM 13 C1' A A 10 4.475 7.875 20.076 1.00 63.54 C
ATOM 14 N9 A A 10 5.932 8.031 20.165 1.00 63.67 N
ATOM 15 C8 A A 10 6.640 9.011 20.829 1.00 56.88 C
ATOM 16 N7 A A 10 7.944 8.892 20.736 1.00 48.41 N
ATOM 17 C5 A A 10 8.107 7.758 19.952 1.00 48.07 C
ATOM 18 C6 A A 10 9.248 7.087 19.485 1.00 50.50 C
ATOM 19 N6 A A 10 10.501 7.476 19.734 1.00 55.72 N
ATOM 20 N1 A A 10 9.065 5.977 18.740 1.00 51.62 N
ATOM 21 C2 A A 10 7.819 5.576 18.481 1.00 48.81 C
ATOM 22 N3 A A 10 6.671 6.120 18.860 1.00 50.93 N
ATOM 23 C4 A A 10 6.884 7.218 19.599 1.00 51.48 C
ATOM 24 P C A 11 0.092 6.807 20.614 1.00 88.79 P
ATOM 25 OP1 C A 11 -0.066 5.782 21.676 1.00 80.58 O
ATOM 26 OP2 C A 11 -0.536 6.572 19.300 1.00 85.83 O
ATOM 27 O5' C A 11 -0.304 8.249 21.151 1.00 66.26 O
TER
ATOM 1 O3' A B 10 1.647 6.968 20.249 1.00 67.87 O
ATOM 2 P C B 11 0.092 6.807 20.614 1.00 88.79 P
ATOM 3 OP1 C B 11 -0.066 5.782 21.676 1.00 80.58 O
ATOM 4 OP2 C B 11 -0.536 6.572 19.300 1.00 85.83 O
ATOM 5 O5' C B 11 -0.304 8.249 21.151 1.00 66.26 O
ATOM 6 C5' C B 11 -0.669 9.279 20.247 1.00 66.37 C
ATOM 7 C4' C B 11 -1.599 10.249 20.922 1.00 73.36 C
ATOM 8 O4' C B 11 -2.975 9.814 20.777 1.00 75.85 O
ATOM 9 C3' C B 11 -1.416 10.353 22.425 1.00 76.88 C
ATOM 10 O3' C B 11 -0.329 11.173 22.798 1.00 80.66 O
ATOM 11 C2' C B 11 -2.759 10.884 22.889 1.00 76.18 C
ATOM 12 O2' C B 11 -2.841 12.270 22.602 1.00 76.29 O
ATOM 13 C1' C B 11 -3.701 10.134 21.947 1.00 76.53 C
ATOM 14 N1 C B 11 -4.235 8.880 22.526 1.00 77.10 N
ATOM 15 C2 C B 11 -5.250 8.945 23.483 1.00 78.69 C
ATOM 16 O2 C B 11 -5.656 10.067 23.819 1.00 88.71 O
ATOM 17 N3 C B 11 -5.749 7.796 24.013 1.00 69.04 N
ATOM 18 C4 C B 11 -5.265 6.615 23.618 1.00 70.01 C
ATOM 19 N4 C B 11 -5.767 5.495 24.143 1.00 69.11 N
ATOM 20 C5 C B 11 -4.229 6.523 22.648 1.00 72.89 C
ATOM 21 C6 C B 11 -3.752 7.665 22.132 1.00 75.64 C
ATOM 22 P C B 12 0.409 10.852 24.173 1.00 88.15 P
ATOM 23 OP1 C B 12 1.694 11.583 24.095 1.00 89.35 O
ATOM 24 OP2 C B 12 0.401 9.386 24.402 1.00 90.53 O
ATOM 25 O5' C B 12 -0.593 11.498 25.215 1.00 92.82 O
TER
ATOM 2 P A A 10 4.813 7.284 24.719 1.00 84.92 P
ATOM 3 OP1 A A 10 5.410 8.258 25.686 1.00 68.69 O
ATOM 4 OP2 A A 10 3.661 6.432 25.103 1.00 80.20 O
ATOM 5 O5' A A 10 4.493 7.986 23.318 1.00 59.70 O
ATOM 6 C5' A A 10 3.287 8.710 23.078 1.00 54.63 C
ATOM 7 C4' A A 10 2.841 8.506 21.655 1.00 63.84 C
ATOM 8 O4' A A 10 3.902 8.964 20.775 1.00 67.96 O
ATOM 9 C3' A A 10 2.612 7.046 21.291 1.00 63.43 C
ATOM 10 O3' A A 10 1.647 6.968 20.249 1.00 67.87 O
ATOM 11 C2' A A 10 3.966 6.608 20.757 1.00 60.13 C
ATOM 12 O2' A A 10 3.900 5.516 19.864 1.00 57.17 O
ATOM 13 C1' A A 10 4.475 7.875 20.076 1.00 63.54 C
ATOM 14 N9 A A 10 5.932 8.031 20.165 1.00 63.67 N
ATOM 15 C8 A A 10 6.640 9.011 20.829 1.00 56.88 C
ATOM 16 N7 A A 10 7.944 8.892 20.736 1.00 48.41 N
ATOM 17 C5 A A 10 8.107 7.758 19.952 1.00 48.07 C
ATOM 18 C6 A A 10 9.248 7.087 19.485 1.00 50.50 C
ATOM 19 N6 A A 10 10.501 7.476 19.734 1.00 55.72 N
ATOM 20 N1 A A 10 9.065 5.977 18.740 1.00 51.62 N
ATOM 21 C2 A A 10 7.819 5.576 18.481 1.00 48.81 C
ATOM 22 N3 A A 10 6.671 6.120 18.860 1.00 50.93 N
ATOM 23 C4 A A 10 6.884 7.218 19.599 1.00 51.48 C
ATOM 24 P C A 11 0.092 6.807 20.614 1.00 88.79 P
ATOM 25 OP1 C A 11 -0.066 5.782 21.676 1.00 80.58 O
ATOM 26 OP2 C A 11 -0.536 6.572 19.300 1.00 85.83 O
ATOM 27 O5' C A 11 -0.304 8.249 21.151 1.00 66.26 O
TER
ATOM 1 O3' A B 10 1.647 6.968 20.249 1.00 67.87 O
ATOM 2 P C B 11 0.092 6.807 20.614 1.00 88.79 P
ATOM 3 OP1 C B 11 -0.066 5.782 21.676 1.00 80.58 O
ATOM 4 OP2 C B 11 -0.536 6.572 19.300 1.00 85.83 O
ATOM 5 O5' C B 11 -0.304 8.249 21.151 1.00 66.26 O
ATOM 6 C5' C B 11 -0.669 9.279 20.247 1.00 66.37 C
ATOM 7 C4' C B 11 -1.599 10.249 20.922 1.00 73.36 C
ATOM 8 O4' C B 11 -2.975 9.814 20.777 1.00 75.85 O
ATOM 9 C3' C B 11 -1.416 10.353 22.425 1.00 76.88 C
ATOM 10 O3' C B 11 -0.329 11.173 22.798 1.00 80.66 O
ATOM 11 C2' C B 11 -2.759 10.884 22.889 1.00 76.18 C
ATOM 12 O2' C B 11 -2.841 12.270 22.602 1.00 76.29 O
ATOM 13 C1' C B 11 -3.701 10.134 21.947 1.00 76.53 C
ATOM 14 N1 C B 11 -4.235 8.880 22.526 1.00 77.10 N
ATOM 15 C2 C B 11 -5.250 8.945 23.483 1.00 78.69 C
ATOM 16 O2 C B 11 -5.656 10.067 23.819 1.00 88.71 O
ATOM 17 N3 C B 11 -5.749 7.796 24.013 1.00 69.04 N
ATOM 18 C4 C B 11 -5.265 6.615 23.618 1.00 70.01 C
ATOM 19 N4 C B 11 -5.767 5.495 24.143 1.00 69.11 N
ATOM 20 C5 C B 11 -4.229 6.523 22.648 1.00 72.89 C
ATOM 21 C6 C B 11 -3.752 7.665 22.132 1.00 75.64 C
ATOM 22 P C B 12 0.409 10.852 24.173 1.00 88.15 P
ATOM 23 OP1 C B 12 1.694 11.583 24.095 1.00 89.35 O
ATOM 24 OP2 C B 12 0.401 9.386 24.402 1.00 90.53 O
ATOM 25 O5' C B 12 -0.593 11.498 25.215 1.00 92.82 O
TER
Atoms:
OP1: (5.410,8.258,25.686)
OP2: (3.661,6.432,25.103)
C3': (2.612,7.046,21.291)
C1': (4.475,7.875,20.076)
C5': (3.287,8.710,23.078)
O4': (3.902,8.964,20.775)
C8: (6.640,9.011,20.829)
O2': (3.900,5.516,19.864)
C6: (9.248,7.087,19.485)
C5: (8.107,7.758,19.952)
C4: (6.884,7.218,19.599)
P: (4.813,7.284,24.719)
C4': (2.841,8.506,21.655)
C2': (3.966,6.608,20.757)
C2: (7.819,5.576,18.481)
N1: (9.065,5.977,18.740)
N3: (6.671,6.120,18.860)
N6: (10.501,7.476,19.734)
N7: (7.944,8.892,20.736)
N9: (5.932,8.031,20.165)
O5': (4.493,7.986,23.318)
O3': (1.647,6.968,20.249)
OP2: (3.661,6.432,25.103)
C3': (2.612,7.046,21.291)
C1': (4.475,7.875,20.076)
C5': (3.287,8.710,23.078)
O4': (3.902,8.964,20.775)
C8: (6.640,9.011,20.829)
O2': (3.900,5.516,19.864)
C6: (9.248,7.087,19.485)
C5: (8.107,7.758,19.952)
C4: (6.884,7.218,19.599)
P: (4.813,7.284,24.719)
C4': (2.841,8.506,21.655)
C2': (3.966,6.608,20.757)
C2: (7.819,5.576,18.481)
N1: (9.065,5.977,18.740)
N3: (6.671,6.120,18.860)
N6: (10.501,7.476,19.734)
N7: (7.944,8.892,20.736)
N9: (5.932,8.031,20.165)
O5': (4.493,7.986,23.318)
O3': (1.647,6.968,20.249)
C2: (-5.250,8.945,23.483)
OP1: (-0.066,5.782,21.676)
OP2: (-0.536,6.572,19.300)
C4: (-5.265,6.615,23.618)
O5': (-0.304,8.249,21.151)
C3': (-1.416,10.353,22.425)
C1': (-3.701,10.134,21.947)
O4': (-2.975,9.814,20.777)
C5': (-0.669,9.279,20.247)
P: (0.092,6.807,20.614)
O2: (-5.656,10.067,23.819)
C4': (-1.599,10.249,20.922)
C2': (-2.759,10.884,22.889)
O2': (-2.841,12.270,22.602)
N1: (-4.235,8.880,22.526)
N3: (-5.749,7.796,24.013)
N4: (-5.767,5.495,24.143)
C6: (-3.752,7.665,22.132)
C5: (-4.229,6.523,22.648)
O3': (-0.329,11.173,22.798)
OP1: (-0.066,5.782,21.676)
OP2: (-0.536,6.572,19.300)
C4: (-5.265,6.615,23.618)
O5': (-0.304,8.249,21.151)
C3': (-1.416,10.353,22.425)
C1': (-3.701,10.134,21.947)
O4': (-2.975,9.814,20.777)
C5': (-0.669,9.279,20.247)
P: (0.092,6.807,20.614)
O2: (-5.656,10.067,23.819)
C4': (-1.599,10.249,20.922)
C2': (-2.759,10.884,22.889)
O2': (-2.841,12.270,22.602)
N1: (-4.235,8.880,22.526)
N3: (-5.749,7.796,24.013)
N4: (-5.767,5.495,24.143)
C6: (-3.752,7.665,22.132)
C5: (-4.229,6.523,22.648)
O3': (-0.329,11.173,22.798)
Image (generated by PyMOL):