Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A1951:A1952
Extra
PDB:
ATOM 1 O3' U A1950 106.720 109.784 111.568 1.00 82.80 O
ATOM 2 P G A1951 105.122 109.653 111.580 1.00 80.96 P
ATOM 3 OP1 G A1951 104.683 108.970 112.820 1.00 81.26 O
ATOM 4 OP2 G A1951 104.723 109.106 110.257 1.00 81.14 O
ATOM 5 O5' G A1951 104.625 111.155 111.748 1.00 77.93 O
ATOM 6 C5' G A1951 105.442 112.248 111.310 1.00 70.67 C
ATOM 7 C4' G A1951 104.804 112.938 110.125 1.00 65.81 C
ATOM 8 O4' G A1951 105.738 113.917 109.631 1.00 63.38 O
ATOM 9 C3' G A1951 104.510 112.005 108.955 1.00 63.46 C
ATOM 10 O3' G A1951 103.463 112.575 108.176 1.00 60.05 O
ATOM 11 C2' G A1951 105.795 112.074 108.142 1.00 63.16 C
ATOM 12 O2' G A1951 105.649 111.837 106.762 1.00 64.06 O
ATOM 13 C1' G A1951 106.265 113.496 108.404 1.00 62.94 C
ATOM 14 N9 G A1951 107.708 113.564 108.518 1.00 62.84 N
ATOM 15 C8 G A1951 108.562 112.631 109.054 1.00 64.01 C
ATOM 16 N7 G A1951 109.810 112.996 109.000 1.00 63.49 N
ATOM 17 C5 G A1951 109.764 114.242 108.398 1.00 62.25 C
ATOM 18 C6 G A1951 110.789 115.130 108.077 1.00 62.49 C
ATOM 19 O6 G A1951 111.993 115.004 108.282 1.00 63.68 O
ATOM 20 N1 G A1951 110.301 116.273 107.451 1.00 61.85 N
ATOM 21 C2 G A1951 108.982 116.521 107.182 1.00 61.60 C
ATOM 22 N2 G A1951 108.700 117.647 106.525 1.00 61.25 N
ATOM 23 N3 G A1951 108.011 115.709 107.516 1.00 62.17 N
ATOM 24 C4 G A1951 108.471 114.594 108.101 1.00 62.26 C
ATOM 25 P C A1952 101.934 112.384 108.600 1.00 60.37 P
ATOM 26 OP1 C A1952 101.284 113.431 107.771 1.00 59.16 O
ATOM 27 OP2 C A1952 101.786 112.429 110.080 1.00 59.95 O
ATOM 28 O5' C A1952 101.516 110.926 108.076 1.00 61.94 O
TER
ATOM 1 O3' G B1951 103.463 112.575 108.176 1.00 60.05 O
ATOM 2 P C B1952 101.934 112.384 108.600 1.00 60.37 P
ATOM 3 OP1 C B1952 101.284 113.431 107.771 1.00 59.16 O
ATOM 4 OP2 C B1952 101.786 112.429 110.080 1.00 59.95 O
ATOM 5 O5' C B1952 101.516 110.926 108.076 1.00 61.94 O
ATOM 6 C5' C B1952 101.556 109.764 108.943 1.00 62.21 C
ATOM 7 C4' C B1952 100.353 108.868 108.722 1.00 64.02 C
ATOM 8 O4' C B1952 99.131 109.584 109.048 1.00 64.99 O
ATOM 9 C3' C B1952 100.121 108.340 107.317 1.00 65.43 C
ATOM 10 O3' C B1952 100.923 107.190 107.031 1.00 67.60 O
ATOM 11 C2' C B1952 98.621 108.035 107.303 1.00 65.48 C
ATOM 12 O2' C B1952 98.280 106.764 107.809 1.00 65.47 O
ATOM 13 C1' C B1952 98.062 109.123 108.223 1.00 64.90 C
ATOM 14 N1 C B1952 97.509 110.269 107.469 1.00 65.12 N
ATOM 15 C2 C B1952 96.116 110.337 107.213 1.00 64.98 C
ATOM 16 O2 C B1952 95.372 109.426 107.623 1.00 65.84 O
ATOM 17 N3 C B1952 95.626 111.398 106.524 1.00 64.72 N
ATOM 18 C4 C B1952 96.454 112.361 106.102 1.00 64.84 C
ATOM 19 N4 C B1952 95.935 113.390 105.440 1.00 64.57 N
ATOM 20 C5 C B1952 97.858 112.312 106.342 1.00 64.81 C
ATOM 21 C6 C B1952 98.337 111.261 107.020 1.00 65.02 C
ATOM 22 P A B1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 23 OP1 A B1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 24 OP2 A B1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 25 O5' A B1953 102.021 108.299 105.056 1.00 66.76 O
TER
ATOM 2 P G A1951 105.122 109.653 111.580 1.00 80.96 P
ATOM 3 OP1 G A1951 104.683 108.970 112.820 1.00 81.26 O
ATOM 4 OP2 G A1951 104.723 109.106 110.257 1.00 81.14 O
ATOM 5 O5' G A1951 104.625 111.155 111.748 1.00 77.93 O
ATOM 6 C5' G A1951 105.442 112.248 111.310 1.00 70.67 C
ATOM 7 C4' G A1951 104.804 112.938 110.125 1.00 65.81 C
ATOM 8 O4' G A1951 105.738 113.917 109.631 1.00 63.38 O
ATOM 9 C3' G A1951 104.510 112.005 108.955 1.00 63.46 C
ATOM 10 O3' G A1951 103.463 112.575 108.176 1.00 60.05 O
ATOM 11 C2' G A1951 105.795 112.074 108.142 1.00 63.16 C
ATOM 12 O2' G A1951 105.649 111.837 106.762 1.00 64.06 O
ATOM 13 C1' G A1951 106.265 113.496 108.404 1.00 62.94 C
ATOM 14 N9 G A1951 107.708 113.564 108.518 1.00 62.84 N
ATOM 15 C8 G A1951 108.562 112.631 109.054 1.00 64.01 C
ATOM 16 N7 G A1951 109.810 112.996 109.000 1.00 63.49 N
ATOM 17 C5 G A1951 109.764 114.242 108.398 1.00 62.25 C
ATOM 18 C6 G A1951 110.789 115.130 108.077 1.00 62.49 C
ATOM 19 O6 G A1951 111.993 115.004 108.282 1.00 63.68 O
ATOM 20 N1 G A1951 110.301 116.273 107.451 1.00 61.85 N
ATOM 21 C2 G A1951 108.982 116.521 107.182 1.00 61.60 C
ATOM 22 N2 G A1951 108.700 117.647 106.525 1.00 61.25 N
ATOM 23 N3 G A1951 108.011 115.709 107.516 1.00 62.17 N
ATOM 24 C4 G A1951 108.471 114.594 108.101 1.00 62.26 C
ATOM 25 P C A1952 101.934 112.384 108.600 1.00 60.37 P
ATOM 26 OP1 C A1952 101.284 113.431 107.771 1.00 59.16 O
ATOM 27 OP2 C A1952 101.786 112.429 110.080 1.00 59.95 O
ATOM 28 O5' C A1952 101.516 110.926 108.076 1.00 61.94 O
TER
ATOM 1 O3' G B1951 103.463 112.575 108.176 1.00 60.05 O
ATOM 2 P C B1952 101.934 112.384 108.600 1.00 60.37 P
ATOM 3 OP1 C B1952 101.284 113.431 107.771 1.00 59.16 O
ATOM 4 OP2 C B1952 101.786 112.429 110.080 1.00 59.95 O
ATOM 5 O5' C B1952 101.516 110.926 108.076 1.00 61.94 O
ATOM 6 C5' C B1952 101.556 109.764 108.943 1.00 62.21 C
ATOM 7 C4' C B1952 100.353 108.868 108.722 1.00 64.02 C
ATOM 8 O4' C B1952 99.131 109.584 109.048 1.00 64.99 O
ATOM 9 C3' C B1952 100.121 108.340 107.317 1.00 65.43 C
ATOM 10 O3' C B1952 100.923 107.190 107.031 1.00 67.60 O
ATOM 11 C2' C B1952 98.621 108.035 107.303 1.00 65.48 C
ATOM 12 O2' C B1952 98.280 106.764 107.809 1.00 65.47 O
ATOM 13 C1' C B1952 98.062 109.123 108.223 1.00 64.90 C
ATOM 14 N1 C B1952 97.509 110.269 107.469 1.00 65.12 N
ATOM 15 C2 C B1952 96.116 110.337 107.213 1.00 64.98 C
ATOM 16 O2 C B1952 95.372 109.426 107.623 1.00 65.84 O
ATOM 17 N3 C B1952 95.626 111.398 106.524 1.00 64.72 N
ATOM 18 C4 C B1952 96.454 112.361 106.102 1.00 64.84 C
ATOM 19 N4 C B1952 95.935 113.390 105.440 1.00 64.57 N
ATOM 20 C5 C B1952 97.858 112.312 106.342 1.00 64.81 C
ATOM 21 C6 C B1952 98.337 111.261 107.020 1.00 65.02 C
ATOM 22 P A B1953 101.415 106.911 105.516 1.00 69.30 P
ATOM 23 OP1 A B1953 100.222 106.662 104.654 1.00 69.37 O
ATOM 24 OP2 A B1953 102.539 105.933 105.522 1.00 68.64 O
ATOM 25 O5' A B1953 102.021 108.299 105.056 1.00 66.76 O
TER
Atoms:
OP1: (104.683,108.970,112.820)
OP2: (104.723,109.106,110.257)
C3': (104.510,112.005,108.955)
C1': (106.265,113.496,108.404)
C5': (105.442,112.248,111.310)
O6: (111.993,115.004,108.282)
O4': (105.738,113.917,109.631)
C8: (108.562,112.631,109.054)
C2: (108.982,116.521,107.182)
C6: (110.789,115.130,108.077)
C5: (109.764,114.242,108.398)
C4: (108.471,114.594,108.101)
P: (105.122,109.653,111.580)
C4': (104.804,112.938,110.125)
C2': (105.795,112.074,108.142)
O2': (105.649,111.837,106.762)
N1: (110.301,116.273,107.451)
N2: (108.700,117.647,106.525)
N3: (108.011,115.709,107.516)
N7: (109.810,112.996,109.000)
N9: (107.708,113.564,108.518)
O5': (104.625,111.155,111.748)
O3': (103.463,112.575,108.176)
OP2: (104.723,109.106,110.257)
C3': (104.510,112.005,108.955)
C1': (106.265,113.496,108.404)
C5': (105.442,112.248,111.310)
O6: (111.993,115.004,108.282)
O4': (105.738,113.917,109.631)
C8: (108.562,112.631,109.054)
C2: (108.982,116.521,107.182)
C6: (110.789,115.130,108.077)
C5: (109.764,114.242,108.398)
C4: (108.471,114.594,108.101)
P: (105.122,109.653,111.580)
C4': (104.804,112.938,110.125)
C2': (105.795,112.074,108.142)
O2': (105.649,111.837,106.762)
N1: (110.301,116.273,107.451)
N2: (108.700,117.647,106.525)
N3: (108.011,115.709,107.516)
N7: (109.810,112.996,109.000)
N9: (107.708,113.564,108.518)
O5': (104.625,111.155,111.748)
O3': (103.463,112.575,108.176)
C2: (96.116,110.337,107.213)
OP1: (101.284,113.431,107.771)
OP2: (101.786,112.429,110.080)
C4: (96.454,112.361,106.102)
O5': (101.516,110.926,108.076)
C3': (100.121,108.340,107.317)
C1': (98.062,109.123,108.223)
O4': (99.131,109.584,109.048)
C5': (101.556,109.764,108.943)
P: (101.934,112.384,108.600)
O2: (95.372,109.426,107.623)
C4': (100.353,108.868,108.722)
C2': (98.621,108.035,107.303)
O2': (98.280,106.764,107.809)
N1: (97.509,110.269,107.469)
N3: (95.626,111.398,106.524)
N4: (95.935,113.390,105.440)
C6: (98.337,111.261,107.020)
C5: (97.858,112.312,106.342)
O3': (100.923,107.190,107.031)
OP1: (101.284,113.431,107.771)
OP2: (101.786,112.429,110.080)
C4: (96.454,112.361,106.102)
O5': (101.516,110.926,108.076)
C3': (100.121,108.340,107.317)
C1': (98.062,109.123,108.223)
O4': (99.131,109.584,109.048)
C5': (101.556,109.764,108.943)
P: (101.934,112.384,108.600)
O2: (95.372,109.426,107.623)
C4': (100.353,108.868,108.722)
C2': (98.621,108.035,107.303)
O2': (98.280,106.764,107.809)
N1: (97.509,110.269,107.469)
N3: (95.626,111.398,106.524)
N4: (95.935,113.390,105.440)
C6: (98.337,111.261,107.020)
C5: (97.858,112.312,106.342)
O3': (100.923,107.190,107.031)
Image (generated by PyMOL):