Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01951:01952
Extra
PDB:
ATOM 1 O3' U A1950 106.873 109.772 111.709 1.00 87.62 O
ATOM 2 P G A1951 105.270 109.741 111.656 1.00 85.95 P
ATOM 3 OP1 G A1951 104.738 109.030 112.852 1.00 85.47 O
ATOM 4 OP2 G A1951 104.930 109.242 110.295 1.00 86.40 O
ATOM 5 O5' G A1951 104.840 111.271 111.805 1.00 80.53 O
ATOM 6 C5' G A1951 105.673 112.325 111.301 1.00 70.34 C
ATOM 7 C4' G A1951 105.024 112.982 110.105 1.00 62.98 C
ATOM 8 O4' G A1951 105.965 113.924 109.534 1.00 61.11 O
ATOM 9 C3' G A1951 104.666 112.046 108.958 1.00 59.54 C
ATOM 10 O3' G A1951 103.654 112.636 108.145 1.00 58.48 O
ATOM 11 C2' G A1951 105.979 111.974 108.190 1.00 57.54 C
ATOM 12 O2' G A1951 105.803 111.644 106.833 1.00 54.94 O
ATOM 13 C1' G A1951 106.500 113.403 108.334 1.00 58.87 C
ATOM 14 N9 G A1951 107.952 113.523 108.412 1.00 59.94 N
ATOM 15 C8 G A1951 108.848 112.603 108.902 1.00 60.25 C
ATOM 16 N7 G A1951 110.082 113.020 108.863 1.00 60.42 N
ATOM 17 C5 G A1951 109.998 114.287 108.308 1.00 61.16 C
ATOM 18 C6 G A1951 111.010 115.227 108.020 1.00 61.79 C
ATOM 19 O6 G A1951 112.226 115.124 108.200 1.00 63.97 O
ATOM 20 N1 G A1951 110.485 116.388 107.464 1.00 61.08 N
ATOM 21 C2 G A1951 109.158 116.612 107.220 1.00 59.91 C
ATOM 22 N2 G A1951 108.845 117.792 106.690 1.00 59.76 N
ATOM 23 N3 G A1951 108.206 115.743 107.479 1.00 60.30 N
ATOM 24 C4 G A1951 108.692 114.610 108.020 1.00 60.73 C
ATOM 25 P C A1952 102.101 112.366 108.456 1.00 56.97 P
ATOM 26 OP1 C A1952 101.343 113.293 107.588 1.00 56.40 O
ATOM 27 OP2 C A1952 101.915 112.426 109.924 1.00 57.57 O
ATOM 28 O5' C A1952 101.818 110.876 107.954 1.00 58.73 O
TER
ATOM 1 O3' G B1951 103.654 112.636 108.145 1.00 58.48 O
ATOM 2 P C B1952 102.101 112.366 108.456 1.00 56.97 P
ATOM 3 OP1 C B1952 101.343 113.293 107.588 1.00 56.40 O
ATOM 4 OP2 C B1952 101.915 112.426 109.924 1.00 57.57 O
ATOM 5 O5' C B1952 101.818 110.876 107.954 1.00 58.73 O
ATOM 6 C5' C B1952 101.741 109.770 108.884 1.00 59.51 C
ATOM 7 C4' C B1952 100.467 108.970 108.672 1.00 61.08 C
ATOM 8 O4' C B1952 99.307 109.800 108.944 1.00 62.39 O
ATOM 9 C3' C B1952 100.194 108.447 107.272 1.00 61.55 C
ATOM 10 O3' C B1952 100.917 107.255 107.004 1.00 64.30 O
ATOM 11 C2' C B1952 98.693 108.179 107.306 1.00 61.58 C
ATOM 12 O2' C B1952 98.335 106.955 107.911 1.00 60.89 O
ATOM 13 C1' C B1952 98.199 109.323 108.191 1.00 61.84 C
ATOM 14 N1 C B1952 97.603 110.431 107.423 1.00 61.96 N
ATOM 15 C2 C B1952 96.211 110.448 107.246 1.00 61.85 C
ATOM 16 O2 C B1952 95.522 109.548 107.758 1.00 63.42 O
ATOM 17 N3 C B1952 95.651 111.439 106.525 1.00 60.81 N
ATOM 18 C4 C B1952 96.416 112.390 105.992 1.00 61.66 C
ATOM 19 N4 C B1952 95.814 113.343 105.284 1.00 63.14 N
ATOM 20 C5 C B1952 97.832 112.405 106.162 1.00 61.36 C
ATOM 21 C6 C B1952 98.378 111.418 106.879 1.00 61.52 C
ATOM 22 P A B1953 101.440 106.963 105.513 1.00 66.41 P
ATOM 23 OP1 A B1953 100.274 106.757 104.610 1.00 65.62 O
ATOM 24 OP2 A B1953 102.495 105.912 105.617 1.00 65.98 O
ATOM 25 O5' A B1953 102.136 108.328 105.089 1.00 64.77 O
TER
ATOM 2 P G A1951 105.270 109.741 111.656 1.00 85.95 P
ATOM 3 OP1 G A1951 104.738 109.030 112.852 1.00 85.47 O
ATOM 4 OP2 G A1951 104.930 109.242 110.295 1.00 86.40 O
ATOM 5 O5' G A1951 104.840 111.271 111.805 1.00 80.53 O
ATOM 6 C5' G A1951 105.673 112.325 111.301 1.00 70.34 C
ATOM 7 C4' G A1951 105.024 112.982 110.105 1.00 62.98 C
ATOM 8 O4' G A1951 105.965 113.924 109.534 1.00 61.11 O
ATOM 9 C3' G A1951 104.666 112.046 108.958 1.00 59.54 C
ATOM 10 O3' G A1951 103.654 112.636 108.145 1.00 58.48 O
ATOM 11 C2' G A1951 105.979 111.974 108.190 1.00 57.54 C
ATOM 12 O2' G A1951 105.803 111.644 106.833 1.00 54.94 O
ATOM 13 C1' G A1951 106.500 113.403 108.334 1.00 58.87 C
ATOM 14 N9 G A1951 107.952 113.523 108.412 1.00 59.94 N
ATOM 15 C8 G A1951 108.848 112.603 108.902 1.00 60.25 C
ATOM 16 N7 G A1951 110.082 113.020 108.863 1.00 60.42 N
ATOM 17 C5 G A1951 109.998 114.287 108.308 1.00 61.16 C
ATOM 18 C6 G A1951 111.010 115.227 108.020 1.00 61.79 C
ATOM 19 O6 G A1951 112.226 115.124 108.200 1.00 63.97 O
ATOM 20 N1 G A1951 110.485 116.388 107.464 1.00 61.08 N
ATOM 21 C2 G A1951 109.158 116.612 107.220 1.00 59.91 C
ATOM 22 N2 G A1951 108.845 117.792 106.690 1.00 59.76 N
ATOM 23 N3 G A1951 108.206 115.743 107.479 1.00 60.30 N
ATOM 24 C4 G A1951 108.692 114.610 108.020 1.00 60.73 C
ATOM 25 P C A1952 102.101 112.366 108.456 1.00 56.97 P
ATOM 26 OP1 C A1952 101.343 113.293 107.588 1.00 56.40 O
ATOM 27 OP2 C A1952 101.915 112.426 109.924 1.00 57.57 O
ATOM 28 O5' C A1952 101.818 110.876 107.954 1.00 58.73 O
TER
ATOM 1 O3' G B1951 103.654 112.636 108.145 1.00 58.48 O
ATOM 2 P C B1952 102.101 112.366 108.456 1.00 56.97 P
ATOM 3 OP1 C B1952 101.343 113.293 107.588 1.00 56.40 O
ATOM 4 OP2 C B1952 101.915 112.426 109.924 1.00 57.57 O
ATOM 5 O5' C B1952 101.818 110.876 107.954 1.00 58.73 O
ATOM 6 C5' C B1952 101.741 109.770 108.884 1.00 59.51 C
ATOM 7 C4' C B1952 100.467 108.970 108.672 1.00 61.08 C
ATOM 8 O4' C B1952 99.307 109.800 108.944 1.00 62.39 O
ATOM 9 C3' C B1952 100.194 108.447 107.272 1.00 61.55 C
ATOM 10 O3' C B1952 100.917 107.255 107.004 1.00 64.30 O
ATOM 11 C2' C B1952 98.693 108.179 107.306 1.00 61.58 C
ATOM 12 O2' C B1952 98.335 106.955 107.911 1.00 60.89 O
ATOM 13 C1' C B1952 98.199 109.323 108.191 1.00 61.84 C
ATOM 14 N1 C B1952 97.603 110.431 107.423 1.00 61.96 N
ATOM 15 C2 C B1952 96.211 110.448 107.246 1.00 61.85 C
ATOM 16 O2 C B1952 95.522 109.548 107.758 1.00 63.42 O
ATOM 17 N3 C B1952 95.651 111.439 106.525 1.00 60.81 N
ATOM 18 C4 C B1952 96.416 112.390 105.992 1.00 61.66 C
ATOM 19 N4 C B1952 95.814 113.343 105.284 1.00 63.14 N
ATOM 20 C5 C B1952 97.832 112.405 106.162 1.00 61.36 C
ATOM 21 C6 C B1952 98.378 111.418 106.879 1.00 61.52 C
ATOM 22 P A B1953 101.440 106.963 105.513 1.00 66.41 P
ATOM 23 OP1 A B1953 100.274 106.757 104.610 1.00 65.62 O
ATOM 24 OP2 A B1953 102.495 105.912 105.617 1.00 65.98 O
ATOM 25 O5' A B1953 102.136 108.328 105.089 1.00 64.77 O
TER
Atoms:
OP1: (104.738,109.030,112.852)
OP2: (104.930,109.242,110.295)
C3': (104.666,112.046,108.958)
C1': (106.500,113.403,108.334)
C5': (105.673,112.325,111.301)
O6: (112.226,115.124,108.200)
O4': (105.965,113.924,109.534)
C8: (108.848,112.603,108.902)
C2: (109.158,116.612,107.220)
C6: (111.010,115.227,108.020)
C5: (109.998,114.287,108.308)
C4: (108.692,114.610,108.020)
P: (105.270,109.741,111.656)
C4': (105.024,112.982,110.105)
C2': (105.979,111.974,108.190)
O2': (105.803,111.644,106.833)
N1: (110.485,116.388,107.464)
N2: (108.845,117.792,106.690)
N3: (108.206,115.743,107.479)
N7: (110.082,113.020,108.863)
N9: (107.952,113.523,108.412)
O5': (104.840,111.271,111.805)
O3': (103.654,112.636,108.145)
OP2: (104.930,109.242,110.295)
C3': (104.666,112.046,108.958)
C1': (106.500,113.403,108.334)
C5': (105.673,112.325,111.301)
O6: (112.226,115.124,108.200)
O4': (105.965,113.924,109.534)
C8: (108.848,112.603,108.902)
C2: (109.158,116.612,107.220)
C6: (111.010,115.227,108.020)
C5: (109.998,114.287,108.308)
C4: (108.692,114.610,108.020)
P: (105.270,109.741,111.656)
C4': (105.024,112.982,110.105)
C2': (105.979,111.974,108.190)
O2': (105.803,111.644,106.833)
N1: (110.485,116.388,107.464)
N2: (108.845,117.792,106.690)
N3: (108.206,115.743,107.479)
N7: (110.082,113.020,108.863)
N9: (107.952,113.523,108.412)
O5': (104.840,111.271,111.805)
O3': (103.654,112.636,108.145)
C2: (96.211,110.448,107.246)
OP1: (101.343,113.293,107.588)
OP2: (101.915,112.426,109.924)
C4: (96.416,112.390,105.992)
O5': (101.818,110.876,107.954)
C3': (100.194,108.447,107.272)
C1': (98.199,109.323,108.191)
O4': (99.307,109.800,108.944)
C5': (101.741,109.770,108.884)
P: (102.101,112.366,108.456)
O2: (95.522,109.548,107.758)
C4': (100.467,108.970,108.672)
C2': (98.693,108.179,107.306)
O2': (98.335,106.955,107.911)
N1: (97.603,110.431,107.423)
N3: (95.651,111.439,106.525)
N4: (95.814,113.343,105.284)
C6: (98.378,111.418,106.879)
C5: (97.832,112.405,106.162)
O3': (100.917,107.255,107.004)
OP1: (101.343,113.293,107.588)
OP2: (101.915,112.426,109.924)
C4: (96.416,112.390,105.992)
O5': (101.818,110.876,107.954)
C3': (100.194,108.447,107.272)
C1': (98.199,109.323,108.191)
O4': (99.307,109.800,108.944)
C5': (101.741,109.770,108.884)
P: (102.101,112.366,108.456)
O2: (95.522,109.548,107.758)
C4': (100.467,108.970,108.672)
C2': (98.693,108.179,107.306)
O2': (98.335,106.955,107.911)
N1: (97.603,110.431,107.423)
N3: (95.651,111.439,106.525)
N4: (95.814,113.343,105.284)
C6: (98.378,111.418,106.879)
C5: (97.832,112.405,106.162)
O3': (100.917,107.255,107.004)
Image (generated by PyMOL):