Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:01951:01952
Extra
PDB:
ATOM 1 O3' U A1950 106.788 109.756 111.390 1.00 85.15 O
ATOM 2 P G A1951 105.185 109.724 111.285 1.00 83.38 P
ATOM 3 OP1 G A1951 104.623 108.983 112.452 1.00 83.46 O
ATOM 4 OP2 G A1951 104.882 109.250 109.907 1.00 83.43 O
ATOM 5 O5' G A1951 104.754 111.255 111.431 1.00 80.27 O
ATOM 6 C5' G A1951 105.567 112.315 110.885 1.00 72.06 C
ATOM 7 C4' G A1951 104.893 112.934 109.675 1.00 66.42 C
ATOM 8 O4' G A1951 105.798 113.895 109.079 1.00 63.89 O
ATOM 9 C3' G A1951 104.554 111.973 108.541 1.00 62.95 C
ATOM 10 O3' G A1951 103.519 112.520 107.729 1.00 59.79 O
ATOM 11 C2' G A1951 105.872 111.914 107.782 1.00 62.26 C
ATOM 12 O2' G A1951 105.743 111.515 106.436 1.00 62.59 O
ATOM 13 C1' G A1951 106.354 113.360 107.895 1.00 62.27 C
ATOM 14 N9 G A1951 107.803 113.505 107.984 1.00 61.21 N
ATOM 15 C8 G A1951 108.706 112.606 108.495 1.00 60.60 C
ATOM 16 N7 G A1951 109.936 113.036 108.446 1.00 60.74 N
ATOM 17 C5 G A1951 109.838 114.290 107.865 1.00 60.91 C
ATOM 18 C6 G A1951 110.840 115.236 107.556 1.00 61.91 C
ATOM 19 O6 G A1951 112.059 115.152 107.733 1.00 64.93 O
ATOM 20 N1 G A1951 110.303 116.379 106.980 1.00 61.34 N
ATOM 21 C2 G A1951 108.974 116.584 106.730 1.00 60.72 C
ATOM 22 N2 G A1951 108.654 117.751 106.172 1.00 60.81 N
ATOM 23 N3 G A1951 108.029 115.709 107.008 1.00 60.62 N
ATOM 24 C4 G A1951 108.529 114.592 107.573 1.00 60.97 C
ATOM 25 P C A1952 101.978 112.213 108.069 1.00 59.32 P
ATOM 26 OP1 C A1952 101.151 113.126 107.239 1.00 58.23 O
ATOM 27 OP2 C A1952 101.831 112.241 109.544 1.00 58.54 O
ATOM 28 O5' C A1952 101.735 110.721 107.554 1.00 60.66 O
TER
ATOM 1 O3' G B1951 103.519 112.520 107.729 1.00 59.79 O
ATOM 2 P C B1952 101.978 112.213 108.069 1.00 59.32 P
ATOM 3 OP1 C B1952 101.151 113.126 107.239 1.00 58.23 O
ATOM 4 OP2 C B1952 101.831 112.241 109.544 1.00 58.54 O
ATOM 5 O5' C B1952 101.735 110.721 107.554 1.00 60.66 O
ATOM 6 C5' C B1952 101.750 109.598 108.466 1.00 61.84 C
ATOM 7 C4' C B1952 100.512 108.731 108.286 1.00 62.68 C
ATOM 8 O4' C B1952 99.320 109.503 108.583 1.00 63.12 O
ATOM 9 C3' C B1952 100.228 108.168 106.903 1.00 63.13 C
ATOM 10 O3' C B1952 100.984 106.994 106.638 1.00 67.17 O
ATOM 11 C2' C B1952 98.747 107.834 106.988 1.00 61.75 C
ATOM 12 O2' C B1952 98.513 106.615 107.663 1.00 60.58 O
ATOM 13 C1' C B1952 98.224 108.992 107.839 1.00 61.64 C
ATOM 14 N1 C B1952 97.621 110.090 107.062 1.00 60.84 N
ATOM 15 C2 C B1952 96.222 110.112 106.880 1.00 60.88 C
ATOM 16 O2 C B1952 95.526 109.185 107.341 1.00 61.17 O
ATOM 17 N3 C B1952 95.666 111.139 106.201 1.00 60.20 N
ATOM 18 C4 C B1952 96.439 112.105 105.699 1.00 60.12 C
ATOM 19 N4 C B1952 95.843 113.101 105.048 1.00 61.18 N
ATOM 20 C5 C B1952 97.856 112.093 105.846 1.00 60.22 C
ATOM 21 C6 C B1952 98.399 111.079 106.529 1.00 59.95 C
ATOM 22 P A B1953 101.421 106.654 105.128 1.00 70.12 P
ATOM 23 OP1 A B1953 100.225 106.248 104.339 1.00 69.11 O
ATOM 24 OP2 A B1953 102.599 105.739 105.216 1.00 70.15 O
ATOM 25 O5' A B1953 101.906 108.056 104.558 1.00 67.62 O
TER
ATOM 2 P G A1951 105.185 109.724 111.285 1.00 83.38 P
ATOM 3 OP1 G A1951 104.623 108.983 112.452 1.00 83.46 O
ATOM 4 OP2 G A1951 104.882 109.250 109.907 1.00 83.43 O
ATOM 5 O5' G A1951 104.754 111.255 111.431 1.00 80.27 O
ATOM 6 C5' G A1951 105.567 112.315 110.885 1.00 72.06 C
ATOM 7 C4' G A1951 104.893 112.934 109.675 1.00 66.42 C
ATOM 8 O4' G A1951 105.798 113.895 109.079 1.00 63.89 O
ATOM 9 C3' G A1951 104.554 111.973 108.541 1.00 62.95 C
ATOM 10 O3' G A1951 103.519 112.520 107.729 1.00 59.79 O
ATOM 11 C2' G A1951 105.872 111.914 107.782 1.00 62.26 C
ATOM 12 O2' G A1951 105.743 111.515 106.436 1.00 62.59 O
ATOM 13 C1' G A1951 106.354 113.360 107.895 1.00 62.27 C
ATOM 14 N9 G A1951 107.803 113.505 107.984 1.00 61.21 N
ATOM 15 C8 G A1951 108.706 112.606 108.495 1.00 60.60 C
ATOM 16 N7 G A1951 109.936 113.036 108.446 1.00 60.74 N
ATOM 17 C5 G A1951 109.838 114.290 107.865 1.00 60.91 C
ATOM 18 C6 G A1951 110.840 115.236 107.556 1.00 61.91 C
ATOM 19 O6 G A1951 112.059 115.152 107.733 1.00 64.93 O
ATOM 20 N1 G A1951 110.303 116.379 106.980 1.00 61.34 N
ATOM 21 C2 G A1951 108.974 116.584 106.730 1.00 60.72 C
ATOM 22 N2 G A1951 108.654 117.751 106.172 1.00 60.81 N
ATOM 23 N3 G A1951 108.029 115.709 107.008 1.00 60.62 N
ATOM 24 C4 G A1951 108.529 114.592 107.573 1.00 60.97 C
ATOM 25 P C A1952 101.978 112.213 108.069 1.00 59.32 P
ATOM 26 OP1 C A1952 101.151 113.126 107.239 1.00 58.23 O
ATOM 27 OP2 C A1952 101.831 112.241 109.544 1.00 58.54 O
ATOM 28 O5' C A1952 101.735 110.721 107.554 1.00 60.66 O
TER
ATOM 1 O3' G B1951 103.519 112.520 107.729 1.00 59.79 O
ATOM 2 P C B1952 101.978 112.213 108.069 1.00 59.32 P
ATOM 3 OP1 C B1952 101.151 113.126 107.239 1.00 58.23 O
ATOM 4 OP2 C B1952 101.831 112.241 109.544 1.00 58.54 O
ATOM 5 O5' C B1952 101.735 110.721 107.554 1.00 60.66 O
ATOM 6 C5' C B1952 101.750 109.598 108.466 1.00 61.84 C
ATOM 7 C4' C B1952 100.512 108.731 108.286 1.00 62.68 C
ATOM 8 O4' C B1952 99.320 109.503 108.583 1.00 63.12 O
ATOM 9 C3' C B1952 100.228 108.168 106.903 1.00 63.13 C
ATOM 10 O3' C B1952 100.984 106.994 106.638 1.00 67.17 O
ATOM 11 C2' C B1952 98.747 107.834 106.988 1.00 61.75 C
ATOM 12 O2' C B1952 98.513 106.615 107.663 1.00 60.58 O
ATOM 13 C1' C B1952 98.224 108.992 107.839 1.00 61.64 C
ATOM 14 N1 C B1952 97.621 110.090 107.062 1.00 60.84 N
ATOM 15 C2 C B1952 96.222 110.112 106.880 1.00 60.88 C
ATOM 16 O2 C B1952 95.526 109.185 107.341 1.00 61.17 O
ATOM 17 N3 C B1952 95.666 111.139 106.201 1.00 60.20 N
ATOM 18 C4 C B1952 96.439 112.105 105.699 1.00 60.12 C
ATOM 19 N4 C B1952 95.843 113.101 105.048 1.00 61.18 N
ATOM 20 C5 C B1952 97.856 112.093 105.846 1.00 60.22 C
ATOM 21 C6 C B1952 98.399 111.079 106.529 1.00 59.95 C
ATOM 22 P A B1953 101.421 106.654 105.128 1.00 70.12 P
ATOM 23 OP1 A B1953 100.225 106.248 104.339 1.00 69.11 O
ATOM 24 OP2 A B1953 102.599 105.739 105.216 1.00 70.15 O
ATOM 25 O5' A B1953 101.906 108.056 104.558 1.00 67.62 O
TER
Atoms:
OP1: (104.623,108.983,112.452)
OP2: (104.882,109.250,109.907)
C3': (104.554,111.973,108.541)
C1': (106.354,113.360,107.895)
C5': (105.567,112.315,110.885)
O6: (112.059,115.152,107.733)
O4': (105.798,113.895,109.079)
C8: (108.706,112.606,108.495)
C2: (108.974,116.584,106.730)
C6: (110.840,115.236,107.556)
C5: (109.838,114.290,107.865)
C4: (108.529,114.592,107.573)
P: (105.185,109.724,111.285)
C4': (104.893,112.934,109.675)
C2': (105.872,111.914,107.782)
O2': (105.743,111.515,106.436)
N1: (110.303,116.379,106.980)
N2: (108.654,117.751,106.172)
N3: (108.029,115.709,107.008)
N7: (109.936,113.036,108.446)
N9: (107.803,113.505,107.984)
O5': (104.754,111.255,111.431)
O3': (103.519,112.520,107.729)
OP2: (104.882,109.250,109.907)
C3': (104.554,111.973,108.541)
C1': (106.354,113.360,107.895)
C5': (105.567,112.315,110.885)
O6: (112.059,115.152,107.733)
O4': (105.798,113.895,109.079)
C8: (108.706,112.606,108.495)
C2: (108.974,116.584,106.730)
C6: (110.840,115.236,107.556)
C5: (109.838,114.290,107.865)
C4: (108.529,114.592,107.573)
P: (105.185,109.724,111.285)
C4': (104.893,112.934,109.675)
C2': (105.872,111.914,107.782)
O2': (105.743,111.515,106.436)
N1: (110.303,116.379,106.980)
N2: (108.654,117.751,106.172)
N3: (108.029,115.709,107.008)
N7: (109.936,113.036,108.446)
N9: (107.803,113.505,107.984)
O5': (104.754,111.255,111.431)
O3': (103.519,112.520,107.729)
C2: (96.222,110.112,106.880)
OP1: (101.151,113.126,107.239)
OP2: (101.831,112.241,109.544)
C4: (96.439,112.105,105.699)
O5': (101.735,110.721,107.554)
C3': (100.228,108.168,106.903)
C1': (98.224,108.992,107.839)
O4': (99.320,109.503,108.583)
C5': (101.750,109.598,108.466)
P: (101.978,112.213,108.069)
O2: (95.526,109.185,107.341)
C4': (100.512,108.731,108.286)
C2': (98.747,107.834,106.988)
O2': (98.513,106.615,107.663)
N1: (97.621,110.090,107.062)
N3: (95.666,111.139,106.201)
N4: (95.843,113.101,105.048)
C6: (98.399,111.079,106.529)
C5: (97.856,112.093,105.846)
O3': (100.984,106.994,106.638)
OP1: (101.151,113.126,107.239)
OP2: (101.831,112.241,109.544)
C4: (96.439,112.105,105.699)
O5': (101.735,110.721,107.554)
C3': (100.228,108.168,106.903)
C1': (98.224,108.992,107.839)
O4': (99.320,109.503,108.583)
C5': (101.750,109.598,108.466)
P: (101.978,112.213,108.069)
O2: (95.526,109.185,107.341)
C4': (100.512,108.731,108.286)
C2': (98.747,107.834,106.988)
O2': (98.513,106.615,107.663)
N1: (97.621,110.090,107.062)
N3: (95.666,111.139,106.201)
N4: (95.843,113.101,105.048)
C6: (98.399,111.079,106.529)
C5: (97.856,112.093,105.846)
O3': (100.984,106.994,106.638)
Image (generated by PyMOL):