Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A1880:A1881
Extra
PDB:
ATOM 1 O3' U A1879 -40.606 109.580 128.378 1.00 60.28 O
ATOM 2 P G A1880 -39.456 110.329 127.539 1.00 20.68 P
ATOM 3 OP1 G A1880 -40.139 111.253 126.582 1.00 22.16 O
ATOM 4 OP2 G A1880 -38.436 109.351 127.032 1.00 22.16 O
ATOM 5 O5' G A1880 -38.752 111.269 128.614 1.00 33.05 O
ATOM 6 C5' G A1880 -38.100 110.737 129.787 1.00 33.05 C
ATOM 7 C4' G A1880 -37.118 111.754 130.319 1.00 33.05 C
ATOM 8 O4' G A1880 -36.034 111.884 129.363 1.00 33.05 O
ATOM 9 C3' G A1880 -37.712 113.145 130.503 1.00 33.05 C
ATOM 10 O3' G A1880 -37.097 113.800 131.612 1.00 33.05 O
ATOM 11 C2' G A1880 -37.312 113.848 129.207 1.00 33.05 C
ATOM 12 O2' G A1880 -37.187 115.251 129.307 1.00 33.05 O
ATOM 13 C1' G A1880 -35.962 113.205 128.888 1.00 33.05 C
ATOM 14 N9 G A1880 -35.696 113.122 127.459 1.00 0.79 N
ATOM 15 C8 G A1880 -36.639 113.056 126.463 1.00 0.79 C
ATOM 16 N7 G A1880 -36.122 112.908 125.276 1.00 0.79 N
ATOM 17 C5 G A1880 -34.755 112.894 125.497 1.00 0.79 C
ATOM 18 C6 G A1880 -33.705 112.741 124.588 1.00 0.79 C
ATOM 19 O6 G A1880 -33.775 112.552 123.363 1.00 0.79 O
ATOM 20 N1 G A1880 -32.468 112.806 125.219 1.00 0.79 N
ATOM 21 C2 G A1880 -32.284 112.970 126.548 1.00 0.79 C
ATOM 22 N2 G A1880 -31.020 113.011 126.938 1.00 0.79 N
ATOM 23 N3 G A1880 -33.266 113.087 127.425 1.00 0.79 N
ATOM 24 C4 G A1880 -34.469 113.046 126.833 1.00 0.79 C
ATOM 25 P C A1881 -37.554 113.459 133.123 1.00 1.68 P
ATOM 26 OP1 C A1881 -36.343 113.747 133.940 1.00 12.47 O
ATOM 27 OP2 C A1881 -38.160 112.108 133.142 1.00 12.47 O
ATOM 28 O5' C A1881 -38.686 114.513 133.485 1.00 13.46 O
TER
ATOM 1 O3' G B1880 -37.097 113.800 131.612 1.00 33.05 O
ATOM 2 P C B1881 -37.554 113.459 133.123 1.00 1.68 P
ATOM 3 OP1 C B1881 -36.343 113.747 133.940 1.00 12.47 O
ATOM 4 OP2 C B1881 -38.160 112.108 133.142 1.00 12.47 O
ATOM 5 O5' C B1881 -38.686 114.513 133.485 1.00 13.46 O
ATOM 6 C5' C B1881 -40.051 114.219 133.225 1.00 13.46 C
ATOM 7 C4' C B1881 -40.920 114.755 134.330 1.00 13.46 C
ATOM 8 O4' C B1881 -40.484 114.198 135.598 1.00 13.46 O
ATOM 9 C3' C B1881 -40.882 116.259 134.549 1.00 13.46 C
ATOM 10 O3' C B1881 -41.737 116.974 133.657 1.00 13.46 O
ATOM 11 C2' C B1881 -41.321 116.399 136.002 1.00 13.46 C
ATOM 12 O2' C B1881 -42.724 116.440 136.160 1.00 13.46 O
ATOM 13 C1' C B1881 -40.734 115.131 136.636 1.00 13.46 C
ATOM 14 N1 C B1881 -39.469 115.416 137.332 1.00 27.38 N
ATOM 15 C2 C B1881 -39.489 115.674 138.713 1.00 27.38 C
ATOM 16 O2 C B1881 -40.550 115.591 139.334 1.00 27.38 O
ATOM 17 N3 C B1881 -38.350 116.006 139.334 1.00 27.38 N
ATOM 18 C4 C B1881 -37.212 116.077 138.642 1.00 27.38 C
ATOM 19 N4 C B1881 -36.102 116.428 139.296 1.00 27.38 N
ATOM 20 C5 C B1881 -37.155 115.794 137.249 1.00 27.38 C
ATOM 21 C6 C B1881 -38.293 115.465 136.641 1.00 27.38 C
ATOM 22 P A B1882 -41.161 118.261 132.892 1.00 25.82 P
ATOM 23 OP1 A B1882 -41.091 119.368 133.870 1.00 44.36 O
ATOM 24 OP2 A B1882 -41.896 118.454 131.623 1.00 44.36 O
ATOM 25 O5' A B1882 -39.672 117.828 132.545 1.00 5.27 O
TER
ATOM 2 P G A1880 -39.456 110.329 127.539 1.00 20.68 P
ATOM 3 OP1 G A1880 -40.139 111.253 126.582 1.00 22.16 O
ATOM 4 OP2 G A1880 -38.436 109.351 127.032 1.00 22.16 O
ATOM 5 O5' G A1880 -38.752 111.269 128.614 1.00 33.05 O
ATOM 6 C5' G A1880 -38.100 110.737 129.787 1.00 33.05 C
ATOM 7 C4' G A1880 -37.118 111.754 130.319 1.00 33.05 C
ATOM 8 O4' G A1880 -36.034 111.884 129.363 1.00 33.05 O
ATOM 9 C3' G A1880 -37.712 113.145 130.503 1.00 33.05 C
ATOM 10 O3' G A1880 -37.097 113.800 131.612 1.00 33.05 O
ATOM 11 C2' G A1880 -37.312 113.848 129.207 1.00 33.05 C
ATOM 12 O2' G A1880 -37.187 115.251 129.307 1.00 33.05 O
ATOM 13 C1' G A1880 -35.962 113.205 128.888 1.00 33.05 C
ATOM 14 N9 G A1880 -35.696 113.122 127.459 1.00 0.79 N
ATOM 15 C8 G A1880 -36.639 113.056 126.463 1.00 0.79 C
ATOM 16 N7 G A1880 -36.122 112.908 125.276 1.00 0.79 N
ATOM 17 C5 G A1880 -34.755 112.894 125.497 1.00 0.79 C
ATOM 18 C6 G A1880 -33.705 112.741 124.588 1.00 0.79 C
ATOM 19 O6 G A1880 -33.775 112.552 123.363 1.00 0.79 O
ATOM 20 N1 G A1880 -32.468 112.806 125.219 1.00 0.79 N
ATOM 21 C2 G A1880 -32.284 112.970 126.548 1.00 0.79 C
ATOM 22 N2 G A1880 -31.020 113.011 126.938 1.00 0.79 N
ATOM 23 N3 G A1880 -33.266 113.087 127.425 1.00 0.79 N
ATOM 24 C4 G A1880 -34.469 113.046 126.833 1.00 0.79 C
ATOM 25 P C A1881 -37.554 113.459 133.123 1.00 1.68 P
ATOM 26 OP1 C A1881 -36.343 113.747 133.940 1.00 12.47 O
ATOM 27 OP2 C A1881 -38.160 112.108 133.142 1.00 12.47 O
ATOM 28 O5' C A1881 -38.686 114.513 133.485 1.00 13.46 O
TER
ATOM 1 O3' G B1880 -37.097 113.800 131.612 1.00 33.05 O
ATOM 2 P C B1881 -37.554 113.459 133.123 1.00 1.68 P
ATOM 3 OP1 C B1881 -36.343 113.747 133.940 1.00 12.47 O
ATOM 4 OP2 C B1881 -38.160 112.108 133.142 1.00 12.47 O
ATOM 5 O5' C B1881 -38.686 114.513 133.485 1.00 13.46 O
ATOM 6 C5' C B1881 -40.051 114.219 133.225 1.00 13.46 C
ATOM 7 C4' C B1881 -40.920 114.755 134.330 1.00 13.46 C
ATOM 8 O4' C B1881 -40.484 114.198 135.598 1.00 13.46 O
ATOM 9 C3' C B1881 -40.882 116.259 134.549 1.00 13.46 C
ATOM 10 O3' C B1881 -41.737 116.974 133.657 1.00 13.46 O
ATOM 11 C2' C B1881 -41.321 116.399 136.002 1.00 13.46 C
ATOM 12 O2' C B1881 -42.724 116.440 136.160 1.00 13.46 O
ATOM 13 C1' C B1881 -40.734 115.131 136.636 1.00 13.46 C
ATOM 14 N1 C B1881 -39.469 115.416 137.332 1.00 27.38 N
ATOM 15 C2 C B1881 -39.489 115.674 138.713 1.00 27.38 C
ATOM 16 O2 C B1881 -40.550 115.591 139.334 1.00 27.38 O
ATOM 17 N3 C B1881 -38.350 116.006 139.334 1.00 27.38 N
ATOM 18 C4 C B1881 -37.212 116.077 138.642 1.00 27.38 C
ATOM 19 N4 C B1881 -36.102 116.428 139.296 1.00 27.38 N
ATOM 20 C5 C B1881 -37.155 115.794 137.249 1.00 27.38 C
ATOM 21 C6 C B1881 -38.293 115.465 136.641 1.00 27.38 C
ATOM 22 P A B1882 -41.161 118.261 132.892 1.00 25.82 P
ATOM 23 OP1 A B1882 -41.091 119.368 133.870 1.00 44.36 O
ATOM 24 OP2 A B1882 -41.896 118.454 131.623 1.00 44.36 O
ATOM 25 O5' A B1882 -39.672 117.828 132.545 1.00 5.27 O
TER
Atoms:
OP1: (-40.139,111.253,126.582)
OP2: (-38.436,109.351,127.032)
C3': (-37.712,113.145,130.503)
C1': (-35.962,113.205,128.888)
C5': (-38.100,110.737,129.787)
O6: (-33.775,112.552,123.363)
O4': (-36.034,111.884,129.363)
C8: (-36.639,113.056,126.463)
C2: (-32.284,112.970,126.548)
C6: (-33.705,112.741,124.588)
C5: (-34.755,112.894,125.497)
C4: (-34.469,113.046,126.833)
P: (-39.456,110.329,127.539)
C4': (-37.118,111.754,130.319)
C2': (-37.312,113.848,129.207)
O2': (-37.187,115.251,129.307)
N1: (-32.468,112.806,125.219)
N2: (-31.020,113.011,126.938)
N3: (-33.266,113.087,127.425)
N7: (-36.122,112.908,125.276)
N9: (-35.696,113.122,127.459)
O5': (-38.752,111.269,128.614)
O3': (-37.097,113.800,131.612)
OP2: (-38.436,109.351,127.032)
C3': (-37.712,113.145,130.503)
C1': (-35.962,113.205,128.888)
C5': (-38.100,110.737,129.787)
O6: (-33.775,112.552,123.363)
O4': (-36.034,111.884,129.363)
C8: (-36.639,113.056,126.463)
C2: (-32.284,112.970,126.548)
C6: (-33.705,112.741,124.588)
C5: (-34.755,112.894,125.497)
C4: (-34.469,113.046,126.833)
P: (-39.456,110.329,127.539)
C4': (-37.118,111.754,130.319)
C2': (-37.312,113.848,129.207)
O2': (-37.187,115.251,129.307)
N1: (-32.468,112.806,125.219)
N2: (-31.020,113.011,126.938)
N3: (-33.266,113.087,127.425)
N7: (-36.122,112.908,125.276)
N9: (-35.696,113.122,127.459)
O5': (-38.752,111.269,128.614)
O3': (-37.097,113.800,131.612)
C2: (-39.489,115.674,138.713)
OP1: (-36.343,113.747,133.940)
OP2: (-38.160,112.108,133.142)
C4: (-37.212,116.077,138.642)
O5': (-38.686,114.513,133.485)
C3': (-40.882,116.259,134.549)
C1': (-40.734,115.131,136.636)
O4': (-40.484,114.198,135.598)
C5': (-40.051,114.219,133.225)
P: (-37.554,113.459,133.123)
O2: (-40.550,115.591,139.334)
C4': (-40.920,114.755,134.330)
C2': (-41.321,116.399,136.002)
O2': (-42.724,116.440,136.160)
N1: (-39.469,115.416,137.332)
N3: (-38.350,116.006,139.334)
N4: (-36.102,116.428,139.296)
C6: (-38.293,115.465,136.641)
C5: (-37.155,115.794,137.249)
O3': (-41.737,116.974,133.657)
OP1: (-36.343,113.747,133.940)
OP2: (-38.160,112.108,133.142)
C4: (-37.212,116.077,138.642)
O5': (-38.686,114.513,133.485)
C3': (-40.882,116.259,134.549)
C1': (-40.734,115.131,136.636)
O4': (-40.484,114.198,135.598)
C5': (-40.051,114.219,133.225)
P: (-37.554,113.459,133.123)
O2: (-40.550,115.591,139.334)
C4': (-40.920,114.755,134.330)
C2': (-41.321,116.399,136.002)
O2': (-42.724,116.440,136.160)
N1: (-39.469,115.416,137.332)
N3: (-38.350,116.006,139.334)
N4: (-36.102,116.428,139.296)
C6: (-38.293,115.465,136.641)
C5: (-37.155,115.794,137.249)
O3': (-41.737,116.974,133.657)
Image (generated by PyMOL):