Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2PN4:B6:A16
Extra
PDB:
ATOM 1 O3' U A 5 -9.721 5.284 27.328 1.00 71.55 O
ATOM 2 P C A 6 -10.891 5.025 26.265 1.00 70.85 P
ATOM 3 OP1 C A 6 -11.961 5.976 26.668 1.00 71.47 O
ATOM 4 OP2 C A 6 -11.191 3.583 26.129 1.00 70.23 O
ATOM 5 O5' C A 6 -10.233 5.497 24.887 1.00 69.12 O
ATOM 6 C5' C A 6 -9.689 6.813 24.804 1.00 68.33 C
ATOM 7 C4' C A 6 -8.829 6.969 23.565 1.00 67.37 C
ATOM 8 O4' C A 6 -7.647 6.131 23.629 1.00 66.55 O
ATOM 9 C3' C A 6 -9.517 6.514 22.301 1.00 66.50 C
ATOM 10 O3' C A 6 -10.475 7.518 21.934 1.00 66.79 O
ATOM 11 C2' C A 6 -8.322 6.265 21.371 1.00 65.29 C
ATOM 12 O2' C A 6 -7.715 7.419 20.834 1.00 64.63 O
ATOM 13 C1' C A 6 -7.332 5.633 22.345 1.00 64.19 C
ATOM 14 N1 C A 6 -7.326 4.135 22.432 1.00 63.14 N
ATOM 15 C2 C A 6 -6.497 3.386 21.570 1.00 62.39 C
ATOM 16 O2 C A 6 -5.790 3.972 20.734 1.00 62.12 O
ATOM 17 N3 C A 6 -6.501 2.025 21.673 1.00 62.07 N
ATOM 18 C4 C A 6 -7.280 1.431 22.592 1.00 61.74 C
ATOM 19 N4 C A 6 -7.255 0.104 22.675 1.00 61.27 N
ATOM 20 C5 C A 6 -8.125 2.173 23.478 1.00 62.64 C
ATOM 21 C6 C A 6 -8.113 3.508 23.364 1.00 62.40 C
ATOM 22 P G A 7 -12.057 7.207 22.010 1.00 66.55 P
ATOM 23 OP1 G A 7 -12.748 8.493 22.236 1.00 66.07 O
ATOM 24 OP2 G A 7 -12.352 6.033 22.885 1.00 65.04 O
ATOM 25 O5' G A 7 -12.364 6.737 20.510 1.00 65.28 O
TER
ATOM 1 O3' C B 15 0.324 -3.400 15.586 1.00 61.49 O
ATOM 2 P U B 16 1.107 -2.392 16.553 1.00 62.99 P
ATOM 3 OP1 U B 16 2.374 -2.104 15.844 1.00 64.20 O
ATOM 4 OP2 U B 16 1.107 -2.981 17.916 1.00 61.95 O
ATOM 5 O5' U B 16 0.252 -1.025 16.552 1.00 61.34 O
ATOM 6 C5' U B 16 0.099 -0.253 15.351 1.00 59.77 C
ATOM 7 C4' U B 16 -0.879 0.896 15.553 1.00 60.54 C
ATOM 8 O4' U B 16 -2.238 0.426 15.802 1.00 59.49 O
ATOM 9 C3' U B 16 -0.570 1.796 16.745 1.00 60.67 C
ATOM 10 O3' U B 16 0.453 2.731 16.414 1.00 61.49 O
ATOM 11 C2' U B 16 -1.925 2.459 16.992 1.00 60.48 C
ATOM 12 O2' U B 16 -2.212 3.549 16.131 1.00 62.73 O
ATOM 13 C1' U B 16 -2.893 1.316 16.701 1.00 59.18 C
ATOM 14 N1 U B 16 -3.332 0.641 17.976 1.00 57.36 N
ATOM 15 C2 U B 16 -4.334 1.220 18.751 1.00 56.43 C
ATOM 16 O2 U B 16 -4.906 2.258 18.452 1.00 56.03 O
ATOM 17 N3 U B 16 -4.653 0.527 19.901 1.00 55.39 N
ATOM 18 C4 U B 16 -4.066 -0.659 20.337 1.00 56.91 C
ATOM 19 O4 U B 16 -4.433 -1.200 21.385 1.00 58.09 O
ATOM 20 C5 U B 16 -3.031 -1.186 19.484 1.00 56.08 C
ATOM 21 C6 U B 16 -2.717 -0.536 18.360 1.00 56.50 C
ATOM 22 P U B 17 1.416 3.383 17.531 1.00 62.47 P
ATOM 23 OP1 U B 17 2.342 4.279 16.791 1.00 62.64 O
ATOM 24 OP2 U B 17 2.000 2.338 18.415 1.00 60.68 O
ATOM 25 O5' U B 17 0.389 4.270 18.380 1.00 62.46 O
TER
ATOM 2 P C A 6 -10.891 5.025 26.265 1.00 70.85 P
ATOM 3 OP1 C A 6 -11.961 5.976 26.668 1.00 71.47 O
ATOM 4 OP2 C A 6 -11.191 3.583 26.129 1.00 70.23 O
ATOM 5 O5' C A 6 -10.233 5.497 24.887 1.00 69.12 O
ATOM 6 C5' C A 6 -9.689 6.813 24.804 1.00 68.33 C
ATOM 7 C4' C A 6 -8.829 6.969 23.565 1.00 67.37 C
ATOM 8 O4' C A 6 -7.647 6.131 23.629 1.00 66.55 O
ATOM 9 C3' C A 6 -9.517 6.514 22.301 1.00 66.50 C
ATOM 10 O3' C A 6 -10.475 7.518 21.934 1.00 66.79 O
ATOM 11 C2' C A 6 -8.322 6.265 21.371 1.00 65.29 C
ATOM 12 O2' C A 6 -7.715 7.419 20.834 1.00 64.63 O
ATOM 13 C1' C A 6 -7.332 5.633 22.345 1.00 64.19 C
ATOM 14 N1 C A 6 -7.326 4.135 22.432 1.00 63.14 N
ATOM 15 C2 C A 6 -6.497 3.386 21.570 1.00 62.39 C
ATOM 16 O2 C A 6 -5.790 3.972 20.734 1.00 62.12 O
ATOM 17 N3 C A 6 -6.501 2.025 21.673 1.00 62.07 N
ATOM 18 C4 C A 6 -7.280 1.431 22.592 1.00 61.74 C
ATOM 19 N4 C A 6 -7.255 0.104 22.675 1.00 61.27 N
ATOM 20 C5 C A 6 -8.125 2.173 23.478 1.00 62.64 C
ATOM 21 C6 C A 6 -8.113 3.508 23.364 1.00 62.40 C
ATOM 22 P G A 7 -12.057 7.207 22.010 1.00 66.55 P
ATOM 23 OP1 G A 7 -12.748 8.493 22.236 1.00 66.07 O
ATOM 24 OP2 G A 7 -12.352 6.033 22.885 1.00 65.04 O
ATOM 25 O5' G A 7 -12.364 6.737 20.510 1.00 65.28 O
TER
ATOM 1 O3' C B 15 0.324 -3.400 15.586 1.00 61.49 O
ATOM 2 P U B 16 1.107 -2.392 16.553 1.00 62.99 P
ATOM 3 OP1 U B 16 2.374 -2.104 15.844 1.00 64.20 O
ATOM 4 OP2 U B 16 1.107 -2.981 17.916 1.00 61.95 O
ATOM 5 O5' U B 16 0.252 -1.025 16.552 1.00 61.34 O
ATOM 6 C5' U B 16 0.099 -0.253 15.351 1.00 59.77 C
ATOM 7 C4' U B 16 -0.879 0.896 15.553 1.00 60.54 C
ATOM 8 O4' U B 16 -2.238 0.426 15.802 1.00 59.49 O
ATOM 9 C3' U B 16 -0.570 1.796 16.745 1.00 60.67 C
ATOM 10 O3' U B 16 0.453 2.731 16.414 1.00 61.49 O
ATOM 11 C2' U B 16 -1.925 2.459 16.992 1.00 60.48 C
ATOM 12 O2' U B 16 -2.212 3.549 16.131 1.00 62.73 O
ATOM 13 C1' U B 16 -2.893 1.316 16.701 1.00 59.18 C
ATOM 14 N1 U B 16 -3.332 0.641 17.976 1.00 57.36 N
ATOM 15 C2 U B 16 -4.334 1.220 18.751 1.00 56.43 C
ATOM 16 O2 U B 16 -4.906 2.258 18.452 1.00 56.03 O
ATOM 17 N3 U B 16 -4.653 0.527 19.901 1.00 55.39 N
ATOM 18 C4 U B 16 -4.066 -0.659 20.337 1.00 56.91 C
ATOM 19 O4 U B 16 -4.433 -1.200 21.385 1.00 58.09 O
ATOM 20 C5 U B 16 -3.031 -1.186 19.484 1.00 56.08 C
ATOM 21 C6 U B 16 -2.717 -0.536 18.360 1.00 56.50 C
ATOM 22 P U B 17 1.416 3.383 17.531 1.00 62.47 P
ATOM 23 OP1 U B 17 2.342 4.279 16.791 1.00 62.64 O
ATOM 24 OP2 U B 17 2.000 2.338 18.415 1.00 60.68 O
ATOM 25 O5' U B 17 0.389 4.270 18.380 1.00 62.46 O
TER
Atoms:
C2: (-6.497,3.386,21.570)
OP1: (-11.961,5.976,26.668)
OP2: (-11.191,3.583,26.129)
C4: (-7.280,1.431,22.592)
O5': (-10.233,5.497,24.887)
C3': (-9.517,6.514,22.301)
C1': (-7.332,5.633,22.345)
O4': (-7.647,6.131,23.629)
C5': (-9.689,6.813,24.804)
P: (-10.891,5.025,26.265)
O2: (-5.790,3.972,20.734)
C4': (-8.829,6.969,23.565)
C2': (-8.322,6.265,21.371)
O2': (-7.715,7.419,20.834)
N1: (-7.326,4.135,22.432)
N3: (-6.501,2.025,21.673)
N4: (-7.255,0.104,22.675)
C6: (-8.113,3.508,23.364)
C5: (-8.125,2.173,23.478)
O3': (-10.475,7.518,21.934)
OP1: (-11.961,5.976,26.668)
OP2: (-11.191,3.583,26.129)
C4: (-7.280,1.431,22.592)
O5': (-10.233,5.497,24.887)
C3': (-9.517,6.514,22.301)
C1': (-7.332,5.633,22.345)
O4': (-7.647,6.131,23.629)
C5': (-9.689,6.813,24.804)
P: (-10.891,5.025,26.265)
O2: (-5.790,3.972,20.734)
C4': (-8.829,6.969,23.565)
C2': (-8.322,6.265,21.371)
O2': (-7.715,7.419,20.834)
N1: (-7.326,4.135,22.432)
N3: (-6.501,2.025,21.673)
N4: (-7.255,0.104,22.675)
C6: (-8.113,3.508,23.364)
C5: (-8.125,2.173,23.478)
O3': (-10.475,7.518,21.934)
C4: (-4.066,-0.659,20.337)
N3: (-4.653,0.527,19.901)
OP1: (2.374,-2.104,15.844)
OP2: (1.107,-2.981,17.916)
C2: (-4.334,1.220,18.751)
C1': (-2.893,1.316,16.701)
C3': (-0.570,1.796,16.745)
O5': (0.252,-1.025,16.552)
O4': (-2.238,0.426,15.802)
C5': (0.099,-0.253,15.351)
P: (1.107,-2.392,16.553)
C4': (-0.879,0.896,15.553)
C2': (-1.925,2.459,16.992)
O2': (-2.212,3.549,16.131)
N1: (-3.332,0.641,17.976)
O4: (-4.433,-1.200,21.385)
O2: (-4.906,2.258,18.452)
C6: (-2.717,-0.536,18.360)
C5: (-3.031,-1.186,19.484)
O3': (0.453,2.731,16.414)
N3: (-4.653,0.527,19.901)
OP1: (2.374,-2.104,15.844)
OP2: (1.107,-2.981,17.916)
C2: (-4.334,1.220,18.751)
C1': (-2.893,1.316,16.701)
C3': (-0.570,1.796,16.745)
O5': (0.252,-1.025,16.552)
O4': (-2.238,0.426,15.802)
C5': (0.099,-0.253,15.351)
P: (1.107,-2.392,16.553)
C4': (-0.879,0.896,15.553)
C2': (-1.925,2.459,16.992)
O2': (-2.212,3.549,16.131)
N1: (-3.332,0.641,17.976)
O4: (-4.433,-1.200,21.385)
O2: (-4.906,2.258,18.452)
C6: (-2.717,-0.536,18.360)
C5: (-3.031,-1.186,19.484)
O3': (0.453,2.731,16.414)
Image (generated by PyMOL):