ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNK:A302:A363

Extra

PDB:
ATOM 1 O3' A A 301 112.837-203.970 122.824 1.00113.45 O
ATOM 2 P G A 302 113.536-202.672 122.203 1.00113.38 P
ATOM 3 OP1 G A 302 113.649-202.876 120.735 1.00129.46 O
ATOM 4 OP2 G A 302 114.755-202.366 123.003 1.00114.48 O
ATOM 5 O5' G A 302 112.477-201.521 122.490 1.00112.96 O
ATOM 6 C5' G A 302 111.115-201.688 122.120 1.00115.06 C
ATOM 7 C4' G A 302 110.238-200.812 122.967 1.00115.13 C
ATOM 8 O4' G A 302 110.210-201.304 124.324 1.00114.68 O
ATOM 9 C3' G A 302 110.715-199.382 123.082 1.00111.74 C
ATOM 10 O3' G A 302 110.264-198.641 121.971 1.00113.38 O
ATOM 11 C2' G A 302 110.106-198.921 124.394 1.00108.78 C
ATOM 12 O2' G A 302 108.778-198.475 124.234 1.00103.57 O
ATOM 13 C1' G A 302 110.132-200.212 125.215 1.00110.05 C
ATOM 14 N9 G A 302 111.269-200.282 126.122 1.00110.48 N
ATOM 15 C8 G A 302 112.489-200.870 125.896 1.00112.83 C
ATOM 16 N7 G A 302 113.300-200.764 126.911 1.00111.21 N
ATOM 17 C5 G A 302 112.569-200.067 127.860 1.00109.76 C
ATOM 18 C6 G A 302 112.917-199.658 129.167 1.00109.84 C
ATOM 19 O6 G A 302 113.982-199.819 129.763 1.00109.19 O
ATOM 20 N1 G A 302 111.870-198.989 129.790 1.00109.08 N
ATOM 21 C2 G A 302 110.651-198.736 129.220 1.00109.60 C
ATOM 22 N2 G A 302 109.773-198.073 129.973 1.00115.11 N
ATOM 23 N3 G A 302 110.317-199.103 128.002 1.00110.55 N
ATOM 24 C4 G A 302 111.316-199.763 127.385 1.00110.23 C
ATOM 25 P C A 303 111.182-197.478 121.383 1.00123.85 P
ATOM 26 OP1 C A 303 110.723-197.164 120.006 1.00129.90 O
ATOM 27 OP2 C A 303 112.598-197.869 121.617 1.00122.46 O
ATOM 28 O5' C A 303 110.838-196.252 122.331 1.00117.23 O
TER

ATOM 1 O3' U B 362 110.884-194.302 136.121 1.00116.61 O
ATOM 2 P G B 363 110.535-195.407 137.232 1.00119.59 P
ATOM 3 OP1 G B 363 109.301-194.955 137.930 1.00112.86 O
ATOM 4 OP2 G B 363 111.780-195.642 138.015 1.00106.99 O
ATOM 5 O5' G B 363 110.236-196.723 136.369 1.00118.50 O
ATOM 6 C5' G B 363 109.274-196.700 135.304 1.00116.05 C
ATOM 7 C4' G B 363 109.413-197.916 134.400 1.00113.09 C
ATOM 8 O4' G B 363 110.673-197.878 133.680 1.00113.24 O
ATOM 9 C3' G B 363 109.398-199.281 135.069 1.00115.61 C
ATOM 10 O3' G B 363 108.087-199.723 135.378 1.00117.02 O
ATOM 11 C2' G B 363 110.106-200.162 134.045 1.00114.01 C
ATOM 12 O2' G B 363 109.270-200.630 133.008 1.00110.67 O
ATOM 13 C1' G B 363 111.157-199.197 133.493 1.00113.16 C
ATOM 14 N9 G B 363 112.399-199.327 134.246 1.00116.82 N
ATOM 15 C8 G B 363 112.568-199.069 135.590 1.00115.85 C
ATOM 16 N7 G B 363 113.771-199.330 136.017 1.00114.92 N
ATOM 17 C5 G B 363 114.446-199.772 134.889 1.00113.61 C
ATOM 18 C6 G B 363 115.780-200.204 134.741 1.00113.48 C
ATOM 19 O6 G B 363 116.660-200.292 135.607 1.00119.45 O
ATOM 20 N1 G B 363 116.058-200.565 133.426 1.00113.75 N
ATOM 21 C2 G B 363 115.163-200.518 132.385 1.00107.29 C
ATOM 22 N2 G B 363 115.632-200.912 131.194 1.00106.08 N
ATOM 23 N3 G B 363 113.908-200.115 132.507 1.00107.94 N
ATOM 24 C4 G B 363 113.618-199.761 133.780 1.00114.36 C
ATOM 25 P G B 364 107.743-200.175 136.881 1.00112.06 P
ATOM 26 OP1 G B 364 106.266-200.026 137.037 1.00114.82 O
ATOM 27 OP2 G B 364 108.656-199.497 137.837 1.00107.42 O
ATOM 28 O5' G B 364 108.133-201.714 136.912 1.00119.96 O
TER

Atoms:
OP1: (113.649,-202.876,120.735)
OP2: (114.755,-202.366,123.003)
C3': (110.715,-199.382,123.082)
C1': (110.132,-200.212,125.215)
C5': (111.115,-201.688,122.120)
O6: (113.982,-199.819,129.763)
O4': (110.210,-201.304,124.324)
C8: (112.489,-200.870,125.896)
C2: (110.651,-198.736,129.220)
C6: (112.917,-199.658,129.167)
C5: (112.569,-200.067,127.860)
C4: (111.316,-199.763,127.385)
P: (113.536,-202.672,122.203)
C4': (110.238,-200.812,122.967)
C2': (110.106,-198.921,124.394)
O2': (108.778,-198.475,124.234)
N1: (111.870,-198.989,129.790)
N2: (109.773,-198.073,129.973)
N3: (110.317,-199.103,128.002)
N7: (113.300,-200.764,126.911)
N9: (111.269,-200.282,126.122)
O5': (112.477,-201.521,122.490)
O3': (110.264,-198.641,121.971)
OP1: (109.301,-194.955,137.930)
OP2: (111.780,-195.642,138.015)
C3': (109.398,-199.281,135.069)
C1': (111.157,-199.197,133.493)
C5': (109.274,-196.700,135.304)
O6: (116.660,-200.292,135.607)
O4': (110.673,-197.878,133.680)
C8: (112.568,-199.069,135.590)
C2: (115.163,-200.518,132.385)
C6: (115.780,-200.204,134.741)
C5: (114.446,-199.772,134.889)
C4: (113.618,-199.761,133.780)
P: (110.535,-195.407,137.232)
C4': (109.413,-197.916,134.400)
C2': (110.106,-200.162,134.045)
O2': (109.270,-200.630,133.008)
N1: (116.058,-200.565,133.426)
N2: (115.632,-200.912,131.194)
N3: (113.908,-200.115,132.507)
N7: (113.771,-199.330,136.017)
N9: (112.399,-199.327,134.246)
O5': (110.236,-196.723,136.369)
O3': (108.087,-199.723,135.378)
Image (generated by PyMOL):
PyMOL image
show in jmol