Doublet info:
Details
Nucleotide types:
GC
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12114:12115
Extra
PDB:
ATOM 1 O3' C A2113 -15.028 -7.115 65.855 1.00 64.77 O
ATOM 2 P G A2114 -13.676 -6.259 65.523 1.00 53.60 P
ATOM 3 OP1 G A2114 -14.002 -5.295 64.386 1.00 53.78 O
ATOM 4 OP2 G A2114 -12.568 -7.268 65.335 1.00 53.30 O
ATOM 5 O5' G A2114 -13.419 -5.457 66.869 1.00 53.52 O
ATOM 6 C5' G A2114 -12.799 -4.208 66.841 1.00 53.42 C
ATOM 7 C4' G A2114 -12.122 -3.946 68.129 1.00 53.23 C
ATOM 8 O4' G A2114 -13.061 -3.330 69.047 1.00 53.48 O
ATOM 9 C3' G A2114 -11.566 -5.186 68.838 1.00 53.02 C
ATOM 10 O3' G A2114 -10.291 -4.878 69.421 1.00 52.71 O
ATOM 11 C2' G A2114 -12.580 -5.404 69.951 1.00 53.24 C
ATOM 12 O2' G A2114 -12.085 -6.083 71.077 1.00 53.09 O
ATOM 13 C1' G A2114 -12.949 -3.974 70.286 1.00 53.40 C
ATOM 14 N9 G A2114 -14.194 -3.840 71.033 1.00 53.72 N
ATOM 15 C8 G A2114 -15.343 -4.518 70.814 1.00 53.98 C
ATOM 16 N7 G A2114 -16.234 -4.220 71.703 1.00 54.23 N
ATOM 17 C5 G A2114 -15.661 -3.306 72.551 1.00 54.13 C
ATOM 18 C6 G A2114 -16.170 -2.646 73.686 1.00 54.31 C
ATOM 19 O6 G A2114 -17.259 -2.717 74.196 1.00 54.60 O
ATOM 20 N1 G A2114 -15.289 -1.792 74.269 1.00 54.14 N
ATOM 21 C2 G A2114 -14.026 -1.606 73.796 1.00 53.82 C
ATOM 22 N2 G A2114 -13.277 -0.735 74.506 1.00 53.70 N
ATOM 23 N3 G A2114 -13.520 -2.215 72.710 1.00 53.64 N
ATOM 24 C4 G A2114 -14.393 -3.065 72.145 1.00 53.81 C
ATOM 25 P C A2115 -8.965 -4.756 68.518 1.00 56.84 P
ATOM 26 OP1 C A2115 -7.953 -4.099 69.322 1.00 56.62 O
ATOM 27 OP2 C A2115 -9.337 -4.150 67.228 1.00 56.98 O
ATOM 28 O5' C A2115 -8.572 -6.251 68.299 1.00 56.69 O
TER
ATOM 1 O3' G B2114 -10.291 -4.878 69.421 1.00 52.71 O
ATOM 2 P C B2115 -8.965 -4.756 68.518 1.00 56.84 P
ATOM 3 OP1 C B2115 -7.953 -4.099 69.322 1.00 56.62 O
ATOM 4 OP2 C B2115 -9.337 -4.150 67.228 1.00 56.98 O
ATOM 5 O5' C B2115 -8.572 -6.251 68.299 1.00 56.69 O
ATOM 6 C5' C B2115 -9.018 -6.934 67.152 1.00 56.80 C
ATOM 7 C4' C B2115 -7.891 -7.656 66.504 1.00 56.54 C
ATOM 8 O4' C B2115 -6.917 -6.708 66.006 1.00 56.36 O
ATOM 9 C3' C B2115 -7.099 -8.537 67.421 1.00 56.31 C
ATOM 10 O3' C B2115 -7.755 -9.768 67.657 1.00 56.44 O
ATOM 11 C2' C B2115 -5.792 -8.669 66.672 1.00 56.04 C
ATOM 12 O2' C B2115 -5.933 -9.598 65.622 1.00 56.09 O
ATOM 13 C1' C B2115 -5.645 -7.276 66.056 1.00 56.06 C
ATOM 14 N1 C B2115 -4.793 -6.415 66.859 1.00 55.87 N
ATOM 15 C2 C B2115 -3.429 -6.429 66.609 1.00 55.59 C
ATOM 16 O2 C B2115 -3.074 -7.170 65.701 1.00 55.52 O
ATOM 17 N3 C B2115 -2.560 -5.683 67.319 1.00 55.41 N
ATOM 18 C4 C B2115 -3.050 -4.932 68.288 1.00 55.53 C
ATOM 19 N4 C B2115 -2.226 -4.193 69.011 1.00 55.38 N
ATOM 20 C5 C B2115 -4.438 -4.896 68.575 1.00 55.82 C
ATOM 21 C6 C B2115 -5.293 -5.648 67.846 1.00 55.98 C
ATOM 22 P A B2116 -7.691 -10.460 69.108 1.00 60.60 P
ATOM 23 OP1 A B2116 -6.292 -10.959 69.284 1.00 60.29 O
ATOM 24 OP2 A B2116 -8.835 -11.412 69.185 1.00 60.86 O
ATOM 25 O5' A B2116 -7.930 -9.248 70.104 1.00 60.66 O
TER
ATOM 2 P G A2114 -13.676 -6.259 65.523 1.00 53.60 P
ATOM 3 OP1 G A2114 -14.002 -5.295 64.386 1.00 53.78 O
ATOM 4 OP2 G A2114 -12.568 -7.268 65.335 1.00 53.30 O
ATOM 5 O5' G A2114 -13.419 -5.457 66.869 1.00 53.52 O
ATOM 6 C5' G A2114 -12.799 -4.208 66.841 1.00 53.42 C
ATOM 7 C4' G A2114 -12.122 -3.946 68.129 1.00 53.23 C
ATOM 8 O4' G A2114 -13.061 -3.330 69.047 1.00 53.48 O
ATOM 9 C3' G A2114 -11.566 -5.186 68.838 1.00 53.02 C
ATOM 10 O3' G A2114 -10.291 -4.878 69.421 1.00 52.71 O
ATOM 11 C2' G A2114 -12.580 -5.404 69.951 1.00 53.24 C
ATOM 12 O2' G A2114 -12.085 -6.083 71.077 1.00 53.09 O
ATOM 13 C1' G A2114 -12.949 -3.974 70.286 1.00 53.40 C
ATOM 14 N9 G A2114 -14.194 -3.840 71.033 1.00 53.72 N
ATOM 15 C8 G A2114 -15.343 -4.518 70.814 1.00 53.98 C
ATOM 16 N7 G A2114 -16.234 -4.220 71.703 1.00 54.23 N
ATOM 17 C5 G A2114 -15.661 -3.306 72.551 1.00 54.13 C
ATOM 18 C6 G A2114 -16.170 -2.646 73.686 1.00 54.31 C
ATOM 19 O6 G A2114 -17.259 -2.717 74.196 1.00 54.60 O
ATOM 20 N1 G A2114 -15.289 -1.792 74.269 1.00 54.14 N
ATOM 21 C2 G A2114 -14.026 -1.606 73.796 1.00 53.82 C
ATOM 22 N2 G A2114 -13.277 -0.735 74.506 1.00 53.70 N
ATOM 23 N3 G A2114 -13.520 -2.215 72.710 1.00 53.64 N
ATOM 24 C4 G A2114 -14.393 -3.065 72.145 1.00 53.81 C
ATOM 25 P C A2115 -8.965 -4.756 68.518 1.00 56.84 P
ATOM 26 OP1 C A2115 -7.953 -4.099 69.322 1.00 56.62 O
ATOM 27 OP2 C A2115 -9.337 -4.150 67.228 1.00 56.98 O
ATOM 28 O5' C A2115 -8.572 -6.251 68.299 1.00 56.69 O
TER
ATOM 1 O3' G B2114 -10.291 -4.878 69.421 1.00 52.71 O
ATOM 2 P C B2115 -8.965 -4.756 68.518 1.00 56.84 P
ATOM 3 OP1 C B2115 -7.953 -4.099 69.322 1.00 56.62 O
ATOM 4 OP2 C B2115 -9.337 -4.150 67.228 1.00 56.98 O
ATOM 5 O5' C B2115 -8.572 -6.251 68.299 1.00 56.69 O
ATOM 6 C5' C B2115 -9.018 -6.934 67.152 1.00 56.80 C
ATOM 7 C4' C B2115 -7.891 -7.656 66.504 1.00 56.54 C
ATOM 8 O4' C B2115 -6.917 -6.708 66.006 1.00 56.36 O
ATOM 9 C3' C B2115 -7.099 -8.537 67.421 1.00 56.31 C
ATOM 10 O3' C B2115 -7.755 -9.768 67.657 1.00 56.44 O
ATOM 11 C2' C B2115 -5.792 -8.669 66.672 1.00 56.04 C
ATOM 12 O2' C B2115 -5.933 -9.598 65.622 1.00 56.09 O
ATOM 13 C1' C B2115 -5.645 -7.276 66.056 1.00 56.06 C
ATOM 14 N1 C B2115 -4.793 -6.415 66.859 1.00 55.87 N
ATOM 15 C2 C B2115 -3.429 -6.429 66.609 1.00 55.59 C
ATOM 16 O2 C B2115 -3.074 -7.170 65.701 1.00 55.52 O
ATOM 17 N3 C B2115 -2.560 -5.683 67.319 1.00 55.41 N
ATOM 18 C4 C B2115 -3.050 -4.932 68.288 1.00 55.53 C
ATOM 19 N4 C B2115 -2.226 -4.193 69.011 1.00 55.38 N
ATOM 20 C5 C B2115 -4.438 -4.896 68.575 1.00 55.82 C
ATOM 21 C6 C B2115 -5.293 -5.648 67.846 1.00 55.98 C
ATOM 22 P A B2116 -7.691 -10.460 69.108 1.00 60.60 P
ATOM 23 OP1 A B2116 -6.292 -10.959 69.284 1.00 60.29 O
ATOM 24 OP2 A B2116 -8.835 -11.412 69.185 1.00 60.86 O
ATOM 25 O5' A B2116 -7.930 -9.248 70.104 1.00 60.66 O
TER
Atoms:
OP1: (-14.002,-5.295,64.386)
OP2: (-12.568,-7.268,65.335)
C3': (-11.566,-5.186,68.838)
C1': (-12.949,-3.974,70.286)
C5': (-12.799,-4.208,66.841)
O6: (-17.259,-2.717,74.196)
O4': (-13.061,-3.330,69.047)
C8: (-15.343,-4.518,70.814)
C2: (-14.026,-1.606,73.796)
C6: (-16.170,-2.646,73.686)
C5: (-15.661,-3.306,72.551)
C4: (-14.393,-3.065,72.145)
P: (-13.676,-6.259,65.523)
C4': (-12.122,-3.946,68.129)
C2': (-12.580,-5.404,69.951)
O2': (-12.085,-6.083,71.077)
N1: (-15.289,-1.792,74.269)
N2: (-13.277,-0.735,74.506)
N3: (-13.520,-2.215,72.710)
N7: (-16.234,-4.220,71.703)
N9: (-14.194,-3.840,71.033)
O5': (-13.419,-5.457,66.869)
O3': (-10.291,-4.878,69.421)
OP2: (-12.568,-7.268,65.335)
C3': (-11.566,-5.186,68.838)
C1': (-12.949,-3.974,70.286)
C5': (-12.799,-4.208,66.841)
O6: (-17.259,-2.717,74.196)
O4': (-13.061,-3.330,69.047)
C8: (-15.343,-4.518,70.814)
C2: (-14.026,-1.606,73.796)
C6: (-16.170,-2.646,73.686)
C5: (-15.661,-3.306,72.551)
C4: (-14.393,-3.065,72.145)
P: (-13.676,-6.259,65.523)
C4': (-12.122,-3.946,68.129)
C2': (-12.580,-5.404,69.951)
O2': (-12.085,-6.083,71.077)
N1: (-15.289,-1.792,74.269)
N2: (-13.277,-0.735,74.506)
N3: (-13.520,-2.215,72.710)
N7: (-16.234,-4.220,71.703)
N9: (-14.194,-3.840,71.033)
O5': (-13.419,-5.457,66.869)
O3': (-10.291,-4.878,69.421)
C2: (-3.429,-6.429,66.609)
OP1: (-7.953,-4.099,69.322)
OP2: (-9.337,-4.150,67.228)
C4: (-3.050,-4.932,68.288)
O5': (-8.572,-6.251,68.299)
C3': (-7.099,-8.537,67.421)
C1': (-5.645,-7.276,66.056)
O4': (-6.917,-6.708,66.006)
C5': (-9.018,-6.934,67.152)
P: (-8.965,-4.756,68.518)
O2: (-3.074,-7.170,65.701)
C4': (-7.891,-7.656,66.504)
C2': (-5.792,-8.669,66.672)
O2': (-5.933,-9.598,65.622)
N1: (-4.793,-6.415,66.859)
N3: (-2.560,-5.683,67.319)
N4: (-2.226,-4.193,69.011)
C6: (-5.293,-5.648,67.846)
C5: (-4.438,-4.896,68.575)
O3': (-7.755,-9.768,67.657)
OP1: (-7.953,-4.099,69.322)
OP2: (-9.337,-4.150,67.228)
C4: (-3.050,-4.932,68.288)
O5': (-8.572,-6.251,68.299)
C3': (-7.099,-8.537,67.421)
C1': (-5.645,-7.276,66.056)
O4': (-6.917,-6.708,66.006)
C5': (-9.018,-6.934,67.152)
P: (-8.965,-4.756,68.518)
O2: (-3.074,-7.170,65.701)
C4': (-7.891,-7.656,66.504)
C2': (-5.792,-8.669,66.672)
O2': (-5.933,-9.598,65.622)
N1: (-4.793,-6.415,66.859)
N3: (-2.560,-5.683,67.319)
N4: (-2.226,-4.193,69.011)
C6: (-5.293,-5.648,67.846)
C5: (-4.438,-4.896,68.575)
O3': (-7.755,-9.768,67.657)
Image (generated by PyMOL):