Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2VQF:A1437:A1413
Extra
PDB:
ATOM 1 O3' G A1436 130.687 39.791 -32.769 1.00 85.78 O
ATOM 2 P C A1437 131.775 40.799 -32.158 1.00 86.27 P
ATOM 3 OP1 C A1437 132.811 40.995 -33.205 1.00 87.06 O
ATOM 4 OP2 C A1437 132.177 40.299 -30.814 1.00 85.62 O
ATOM 5 O5' C A1437 130.959 42.155 -31.990 1.00 85.67 O
ATOM 6 C5' C A1437 130.369 42.806 -33.127 1.00 85.18 C
ATOM 7 C4' C A1437 129.731 44.111 -32.716 1.00 85.45 C
ATOM 8 O4' C A1437 128.548 43.848 -31.920 1.00 86.06 O
ATOM 9 C3' C A1437 130.572 45.024 -31.840 1.00 86.23 C
ATOM 10 O3' C A1437 131.493 45.795 -32.564 1.00 87.79 O
ATOM 11 C2' C A1437 129.519 45.881 -31.155 1.00 86.49 C
ATOM 12 O2' C A1437 129.069 46.944 -31.971 1.00 86.03 O
ATOM 13 C1' C A1437 128.393 44.867 -30.940 1.00 86.57 C
ATOM 14 N1 C A1437 128.459 44.261 -29.586 1.00 86.02 N
ATOM 15 C2 C A1437 127.728 44.852 -28.529 1.00 85.98 C
ATOM 16 O2 C A1437 126.992 45.827 -28.762 1.00 86.48 O
ATOM 17 N3 C A1437 127.845 44.344 -27.284 1.00 85.79 N
ATOM 18 C4 C A1437 128.631 43.290 -27.064 1.00 86.00 C
ATOM 19 N4 C A1437 128.731 42.839 -25.813 1.00 85.85 N
ATOM 20 C5 C A1437 129.356 42.653 -28.116 1.00 86.02 C
ATOM 21 C6 C A1437 129.240 43.163 -29.347 1.00 85.58 C
ATOM 22 P C A1438 132.930 46.124 -31.917 1.00 89.12 P
ATOM 23 OP1 C A1438 133.688 46.890 -32.951 1.00 89.54 O
ATOM 24 OP2 C A1438 133.513 44.872 -31.368 1.00 88.22 O
ATOM 25 O5' C A1438 132.580 47.120 -30.719 1.00 88.30 O
TER
ATOM 1 O3' G B1412 124.881 43.953 -16.364 1.00 74.37 O
ATOM 2 P U B1413 123.673 43.085 -16.992 1.00 74.79 P
ATOM 3 OP1 U B1413 122.697 42.808 -15.884 1.00 73.85 O
ATOM 4 OP2 U B1413 124.264 41.957 -17.749 1.00 73.71 O
ATOM 5 O5' U B1413 122.971 44.084 -18.027 1.00 74.60 O
ATOM 6 C5' U B1413 122.457 45.353 -17.589 1.00 74.77 C
ATOM 7 C4' U B1413 122.493 46.365 -18.714 1.00 75.35 C
ATOM 8 O4' U B1413 123.862 46.577 -19.159 1.00 76.16 O
ATOM 9 C3' U B1413 121.735 46.029 -19.988 1.00 74.88 C
ATOM 10 O3' U B1413 120.360 46.333 -19.898 1.00 74.74 O
ATOM 11 C2' U B1413 122.416 46.922 -21.017 1.00 75.70 C
ATOM 12 O2' U B1413 121.933 48.249 -20.956 1.00 75.04 O
ATOM 13 C1' U B1413 123.869 46.910 -20.541 1.00 76.52 C
ATOM 14 N1 U B1413 124.719 45.948 -21.268 1.00 78.02 N
ATOM 15 C2 U B1413 125.079 46.248 -22.577 1.00 78.41 C
ATOM 16 O2 U B1413 124.698 47.247 -23.161 1.00 79.44 O
ATOM 17 N3 U B1413 125.902 45.329 -23.177 1.00 78.95 N
ATOM 18 C4 U B1413 126.392 44.166 -22.622 1.00 80.34 C
ATOM 19 O4 U B1413 127.219 43.495 -23.245 1.00 80.39 O
ATOM 20 C5 U B1413 125.952 43.915 -21.288 1.00 80.34 C
ATOM 21 C6 U B1413 125.154 44.791 -20.674 1.00 78.90 C
ATOM 22 P C B1414 119.312 45.495 -20.782 1.00 75.52 P
ATOM 23 OP1 C B1414 117.959 46.102 -20.656 1.00 74.86 O
ATOM 24 OP2 C B1414 119.514 44.067 -20.467 1.00 77.48 O
ATOM 25 O5' C B1414 119.792 45.740 -22.256 1.00 76.75 O
TER
ATOM 2 P C A1437 131.775 40.799 -32.158 1.00 86.27 P
ATOM 3 OP1 C A1437 132.811 40.995 -33.205 1.00 87.06 O
ATOM 4 OP2 C A1437 132.177 40.299 -30.814 1.00 85.62 O
ATOM 5 O5' C A1437 130.959 42.155 -31.990 1.00 85.67 O
ATOM 6 C5' C A1437 130.369 42.806 -33.127 1.00 85.18 C
ATOM 7 C4' C A1437 129.731 44.111 -32.716 1.00 85.45 C
ATOM 8 O4' C A1437 128.548 43.848 -31.920 1.00 86.06 O
ATOM 9 C3' C A1437 130.572 45.024 -31.840 1.00 86.23 C
ATOM 10 O3' C A1437 131.493 45.795 -32.564 1.00 87.79 O
ATOM 11 C2' C A1437 129.519 45.881 -31.155 1.00 86.49 C
ATOM 12 O2' C A1437 129.069 46.944 -31.971 1.00 86.03 O
ATOM 13 C1' C A1437 128.393 44.867 -30.940 1.00 86.57 C
ATOM 14 N1 C A1437 128.459 44.261 -29.586 1.00 86.02 N
ATOM 15 C2 C A1437 127.728 44.852 -28.529 1.00 85.98 C
ATOM 16 O2 C A1437 126.992 45.827 -28.762 1.00 86.48 O
ATOM 17 N3 C A1437 127.845 44.344 -27.284 1.00 85.79 N
ATOM 18 C4 C A1437 128.631 43.290 -27.064 1.00 86.00 C
ATOM 19 N4 C A1437 128.731 42.839 -25.813 1.00 85.85 N
ATOM 20 C5 C A1437 129.356 42.653 -28.116 1.00 86.02 C
ATOM 21 C6 C A1437 129.240 43.163 -29.347 1.00 85.58 C
ATOM 22 P C A1438 132.930 46.124 -31.917 1.00 89.12 P
ATOM 23 OP1 C A1438 133.688 46.890 -32.951 1.00 89.54 O
ATOM 24 OP2 C A1438 133.513 44.872 -31.368 1.00 88.22 O
ATOM 25 O5' C A1438 132.580 47.120 -30.719 1.00 88.30 O
TER
ATOM 1 O3' G B1412 124.881 43.953 -16.364 1.00 74.37 O
ATOM 2 P U B1413 123.673 43.085 -16.992 1.00 74.79 P
ATOM 3 OP1 U B1413 122.697 42.808 -15.884 1.00 73.85 O
ATOM 4 OP2 U B1413 124.264 41.957 -17.749 1.00 73.71 O
ATOM 5 O5' U B1413 122.971 44.084 -18.027 1.00 74.60 O
ATOM 6 C5' U B1413 122.457 45.353 -17.589 1.00 74.77 C
ATOM 7 C4' U B1413 122.493 46.365 -18.714 1.00 75.35 C
ATOM 8 O4' U B1413 123.862 46.577 -19.159 1.00 76.16 O
ATOM 9 C3' U B1413 121.735 46.029 -19.988 1.00 74.88 C
ATOM 10 O3' U B1413 120.360 46.333 -19.898 1.00 74.74 O
ATOM 11 C2' U B1413 122.416 46.922 -21.017 1.00 75.70 C
ATOM 12 O2' U B1413 121.933 48.249 -20.956 1.00 75.04 O
ATOM 13 C1' U B1413 123.869 46.910 -20.541 1.00 76.52 C
ATOM 14 N1 U B1413 124.719 45.948 -21.268 1.00 78.02 N
ATOM 15 C2 U B1413 125.079 46.248 -22.577 1.00 78.41 C
ATOM 16 O2 U B1413 124.698 47.247 -23.161 1.00 79.44 O
ATOM 17 N3 U B1413 125.902 45.329 -23.177 1.00 78.95 N
ATOM 18 C4 U B1413 126.392 44.166 -22.622 1.00 80.34 C
ATOM 19 O4 U B1413 127.219 43.495 -23.245 1.00 80.39 O
ATOM 20 C5 U B1413 125.952 43.915 -21.288 1.00 80.34 C
ATOM 21 C6 U B1413 125.154 44.791 -20.674 1.00 78.90 C
ATOM 22 P C B1414 119.312 45.495 -20.782 1.00 75.52 P
ATOM 23 OP1 C B1414 117.959 46.102 -20.656 1.00 74.86 O
ATOM 24 OP2 C B1414 119.514 44.067 -20.467 1.00 77.48 O
ATOM 25 O5' C B1414 119.792 45.740 -22.256 1.00 76.75 O
TER
Atoms:
C2: (127.728,44.852,-28.529)
OP1: (132.811,40.995,-33.205)
OP2: (132.177,40.299,-30.814)
C4: (128.631,43.290,-27.064)
O5': (130.959,42.155,-31.990)
C3': (130.572,45.024,-31.840)
C1': (128.393,44.867,-30.940)
O4': (128.548,43.848,-31.920)
C5': (130.369,42.806,-33.127)
P: (131.775,40.799,-32.158)
O2: (126.992,45.827,-28.762)
C4': (129.731,44.111,-32.716)
C2': (129.519,45.881,-31.155)
O2': (129.069,46.944,-31.971)
N1: (128.459,44.261,-29.586)
N3: (127.845,44.344,-27.284)
N4: (128.731,42.839,-25.813)
C6: (129.240,43.163,-29.347)
C5: (129.356,42.653,-28.116)
O3': (131.493,45.795,-32.564)
OP1: (132.811,40.995,-33.205)
OP2: (132.177,40.299,-30.814)
C4: (128.631,43.290,-27.064)
O5': (130.959,42.155,-31.990)
C3': (130.572,45.024,-31.840)
C1': (128.393,44.867,-30.940)
O4': (128.548,43.848,-31.920)
C5': (130.369,42.806,-33.127)
P: (131.775,40.799,-32.158)
O2: (126.992,45.827,-28.762)
C4': (129.731,44.111,-32.716)
C2': (129.519,45.881,-31.155)
O2': (129.069,46.944,-31.971)
N1: (128.459,44.261,-29.586)
N3: (127.845,44.344,-27.284)
N4: (128.731,42.839,-25.813)
C6: (129.240,43.163,-29.347)
C5: (129.356,42.653,-28.116)
O3': (131.493,45.795,-32.564)
C4: (126.392,44.166,-22.622)
N3: (125.902,45.329,-23.177)
OP1: (122.697,42.808,-15.884)
OP2: (124.264,41.957,-17.749)
C2: (125.079,46.248,-22.577)
C1': (123.869,46.910,-20.541)
C3': (121.735,46.029,-19.988)
O5': (122.971,44.084,-18.027)
O4': (123.862,46.577,-19.159)
C5': (122.457,45.353,-17.589)
P: (123.673,43.085,-16.992)
C4': (122.493,46.365,-18.714)
C2': (122.416,46.922,-21.017)
O2': (121.933,48.249,-20.956)
N1: (124.719,45.948,-21.268)
O4: (127.219,43.495,-23.245)
O2: (124.698,47.247,-23.161)
C6: (125.154,44.791,-20.674)
C5: (125.952,43.915,-21.288)
O3': (120.360,46.333,-19.898)
N3: (125.902,45.329,-23.177)
OP1: (122.697,42.808,-15.884)
OP2: (124.264,41.957,-17.749)
C2: (125.079,46.248,-22.577)
C1': (123.869,46.910,-20.541)
C3': (121.735,46.029,-19.988)
O5': (122.971,44.084,-18.027)
O4': (123.862,46.577,-19.159)
C5': (122.457,45.353,-17.589)
P: (123.673,43.085,-16.992)
C4': (122.493,46.365,-18.714)
C2': (122.416,46.922,-21.017)
O2': (121.933,48.249,-20.956)
N1: (124.719,45.948,-21.268)
O4: (127.219,43.495,-23.245)
O2: (124.698,47.247,-23.161)
C6: (125.154,44.791,-20.674)
C5: (125.952,43.915,-21.288)
O3': (120.360,46.333,-19.898)
Image (generated by PyMOL):