ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ4:01253:0898

Extra

PDB:
ATOM 1 O3' U A1252 37.997 103.978 82.534 1.00 35.02 O
ATOM 2 P A A1253 37.924 103.818 80.947 1.00 33.21 P
ATOM 3 OP1 A A1253 38.278 105.150 80.423 1.00 33.62 O
ATOM 4 OP2 A A1253 36.597 103.207 80.615 1.00 36.63 O
ATOM 5 O5' A A1253 39.105 102.814 80.572 1.00 31.56 O
ATOM 6 C5' A A1253 40.473 103.206 80.762 1.00 34.15 C
ATOM 7 C4' A A1253 41.415 102.065 80.450 1.00 34.62 C
ATOM 8 O4' A A1253 41.242 100.985 81.401 1.00 36.04 O
ATOM 9 C3' A A1253 41.240 101.400 79.102 1.00 35.89 C
ATOM 10 O3' A A1253 41.860 102.167 78.082 1.00 37.46 O
ATOM 11 C2' A A1253 41.927 100.058 79.324 1.00 36.64 C
ATOM 12 O2' A A1253 43.329 100.135 79.260 1.00 38.87 O
ATOM 13 C1' A A1253 41.536 99.750 80.771 1.00 35.72 C
ATOM 14 N9 A A1253 40.366 98.875 80.872 1.00 35.15 N
ATOM 15 C8 A A1253 39.083 99.190 81.244 1.00 34.03 C
ATOM 16 N7 A A1253 38.259 98.168 81.206 1.00 35.52 N
ATOM 17 C5 A A1253 39.055 97.111 80.784 1.00 34.49 C
ATOM 18 C6 A A1253 38.778 95.756 80.533 1.00 34.36 C
ATOM 19 N6 A A1253 37.568 95.206 80.663 1.00 34.32 N
ATOM 20 N1 A A1253 39.801 94.972 80.133 1.00 35.14 N
ATOM 21 C2 A A1253 41.008 95.521 79.986 1.00 34.95 C
ATOM 22 N3 A A1253 41.389 96.777 80.183 1.00 35.05 N
ATOM 23 C4 A A1253 40.354 97.530 80.584 1.00 34.13 C
ATOM 24 P G A1254 41.057 102.497 76.727 1.00 38.40 P
ATOM 25 OP1 G A1254 42.056 103.117 75.830 1.00 37.36 O
ATOM 26 OP2 G A1254 39.813 103.233 77.056 1.00 36.52 O
ATOM 27 O5' G A1254 40.661 101.060 76.162 1.00 36.74 O
TER

ATOM 1 O3' C B 897 30.162 89.612 80.977 1.00 35.48 O
ATOM 2 P G B 898 30.535 89.843 82.526 1.00 35.25 P
ATOM 3 OP1 G B 898 30.620 88.525 83.196 1.00 32.59 O
ATOM 4 OP2 G B 898 29.613 90.885 83.053 1.00 33.82 O
ATOM 5 O5' G B 898 31.995 90.482 82.492 1.00 37.22 O
ATOM 6 C5' G B 898 33.084 89.840 81.803 1.00 35.52 C
ATOM 7 C4' G B 898 34.245 90.804 81.654 1.00 37.39 C
ATOM 8 O4' G B 898 33.872 91.898 80.770 1.00 38.09 O
ATOM 9 C3' G B 898 34.695 91.503 82.927 1.00 36.01 C
ATOM 10 O3' G B 898 35.556 90.685 83.715 1.00 33.01 O
ATOM 11 C2' G B 898 35.388 92.741 82.381 1.00 35.88 C
ATOM 12 O2' G B 898 36.667 92.455 81.855 1.00 38.66 O
ATOM 13 C1' G B 898 34.463 93.110 81.227 1.00 35.94 C
ATOM 14 N9 G B 898 33.389 94.006 81.648 1.00 36.51 N
ATOM 15 C8 G B 898 32.084 93.658 81.888 1.00 36.13 C
ATOM 16 N7 G B 898 31.348 94.664 82.262 1.00 36.10 N
ATOM 17 C5 G B 898 32.215 95.744 82.271 1.00 35.28 C
ATOM 18 C6 G B 898 31.979 97.091 82.596 1.00 35.90 C
ATOM 19 O6 G B 898 30.928 97.614 82.965 1.00 38.64 O
ATOM 20 N1 G B 898 33.125 97.860 82.463 1.00 34.39 N
ATOM 21 C2 G B 898 34.347 97.387 82.075 1.00 34.58 C
ATOM 22 N2 G B 898 35.328 98.296 81.996 1.00 33.23 N
ATOM 23 N3 G B 898 34.587 96.120 81.781 1.00 35.77 N
ATOM 24 C4 G B 898 33.479 95.360 81.893 1.00 35.74 C
ATOM 25 P A B 899 35.847 91.086 85.246 1.00 34.29 P
ATOM 26 OP1 A B 899 36.267 89.844 85.943 1.00 26.42 O
ATOM 27 OP2 A B 899 34.707 91.882 85.771 1.00 28.96 O
ATOM 28 O5' A B 899 37.075 92.101 85.148 1.00 34.04 O
TER

Atoms:
OP1: (38.278,105.150,80.423)
OP2: (36.597,103.207,80.615)
C3': (41.240,101.400,79.102)
C1': (41.536,99.750,80.771)
C5': (40.473,103.206,80.762)
O4': (41.242,100.985,81.401)
C8: (39.083,99.190,81.244)
O2': (43.329,100.135,79.260)
C6: (38.778,95.756,80.533)
C5: (39.055,97.111,80.784)
C4: (40.354,97.530,80.584)
P: (37.924,103.818,80.947)
C4': (41.415,102.065,80.450)
C2': (41.927,100.058,79.324)
C2: (41.008,95.521,79.986)
N1: (39.801,94.972,80.133)
N3: (41.389,96.777,80.183)
N6: (37.568,95.206,80.663)
N7: (38.259,98.168,81.206)
N9: (40.366,98.875,80.872)
O5': (39.105,102.814,80.572)
O3': (41.860,102.167,78.082)
OP1: (30.620,88.525,83.196)
OP2: (29.613,90.885,83.053)
C3': (34.695,91.503,82.927)
C1': (34.463,93.110,81.227)
C5': (33.084,89.840,81.803)
O6: (30.928,97.614,82.965)
O4': (33.872,91.898,80.770)
C8: (32.084,93.658,81.888)
C2: (34.347,97.387,82.075)
C6: (31.979,97.091,82.596)
C5: (32.215,95.744,82.271)
C4: (33.479,95.360,81.893)
P: (30.535,89.843,82.526)
C4': (34.245,90.804,81.654)
C2': (35.388,92.741,82.381)
O2': (36.667,92.455,81.855)
N1: (33.125,97.860,82.463)
N2: (35.328,98.296,81.996)
N3: (34.587,96.120,81.781)
N7: (31.348,94.664,82.262)
N9: (33.389,94.006,81.648)
O5': (31.995,90.482,82.492)
O3': (35.556,90.685,83.715)
Image (generated by PyMOL):
PyMOL image
show in jmol